| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610234
Identifier: 120610234
GI number: 120610234
Start: 1716194
End: 1716991
Strand: Direct
Name: 120610234
Synonym: Aave_1549
Alternate gene names: NA
Gene position: 1716194-1716991 (Clockwise)
Preceding gene: 120610231
Following gene: 120610235
Centisome position: 32.06
GC content: 71.18
Gene sequence:
>798_bases GTGCGTACCATCACCGTAAGCCGCTACGTCACGCCGCTGCGCGAGGGCGGCTCCATGCCGGCCGTCGTGGAGGGCGACGA CCTCGGCGTCTATGTCCTCAAGTTCCGCGGTGCCGGGCAGGGCGTGCGTGCGCTCATGGCCGAGATCATCGCCGGCGGCA TCGCCCGTGCGCTGGAACTGCCCGTGCCCGAAATCGTGCTGGCCCAGCTCGATCCGGCACTCGCGCAGACCGAGCCGGAC CCCGAGATCCAGGACCTGATCCGCGCGAGCGCGGGGCTGAACGTGGCGCTCGACTATCTCTCCGGCGCGGTCAACTTCGA TCCGGCGGTGGACCGCGTCACGCCCGATTTCGCGTCGCGCCTCGTCTGGTTCGACGCGCTGGTGGGCAACGTGGACCGCA CCGCGCGCAACACCAACCTGCTGGTGTGGCACCGCGACCCGTGGCTGATCGACCATGGCGCGTCGCTCACCTTCCACCAC GCCTGGAACGGCACGGTGGCGCAGCCCGCCAAACCGTTCGCGCCGATCGCCGACCATGTGCTGCTGCCCCTGGCCACGGA ACTGGCGGCGGTGGATGCCGGGCTGGCTGCGCGCCTCACTCCAGAATGCCTGCAGGCGGTGCTGGCCGAGGTGCCCGACC TGTTCCTGGCACAGGCGGCCGAGGGCCATGGGGACGGGGAGGGCGATGGTCCGCTCGCCGATCCGGCGGCGCACCGGCAG GCCTACGTCGATTATTTCCTGGCGCGGCTCGCGGGCCGGCAAGCCTGGCTGCAGGGGGCGATCGATGCACGCGGCTGA
Upstream 100 bases:
>100_bases GCGCTGCGCACCCGGTGCATGGGCGAAAAACTGCCCTCCCCGGCGAAGAGGGCACTACCATGGGTGCCCTTTTCTCATCT CTTGTCGCGAAAGCCCCGCC
Downstream 100 bases:
>100_bases CGTCTATGACTACGCCATCGTGCGCGTGGTGCCGCGCGTGGAGCGCGAGGAATTCATCAACGCCGGCGTGATCCTCTCGT GCCAGCGTTCCGGCTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRTITVSRYVTPLREGGSMPAVVEGDDLGVYVLKFRGAGQGVRALMAEIIAGGIARALELPVPEIVLAQLDPALAQTEPD PEIQDLIRASAGLNVALDYLSGAVNFDPAVDRVTPDFASRLVWFDALVGNVDRTARNTNLLVWHRDPWLIDHGASLTFHH AWNGTVAQPAKPFAPIADHVLLPLATELAAVDAGLAARLTPECLQAVLAEVPDLFLAQAAEGHGDGEGDGPLADPAAHRQ AYVDYFLARLAGRQAWLQGAIDARG
Sequences:
>Translated_265_residues MRTITVSRYVTPLREGGSMPAVVEGDDLGVYVLKFRGAGQGVRALMAEIIAGGIARALELPVPEIVLAQLDPALAQTEPD PEIQDLIRASAGLNVALDYLSGAVNFDPAVDRVTPDFASRLVWFDALVGNVDRTARNTNLLVWHRDPWLIDHGASLTFHH AWNGTVAQPAKPFAPIADHVLLPLATELAAVDAGLAARLTPECLQAVLAEVPDLFLAQAAEGHGDGEGDGPLADPAAHRQ AYVDYFLARLAGRQAWLQGAIDARG >Mature_265_residues MRTITVSRYVTPLREGGSMPAVVEGDDLGVYVLKFRGAGQGVRALMAEIIAGGIARALELPVPEIVLAQLDPALAQTEPD PEIQDLIRASAGLNVALDYLSGAVNFDPAVDRVTPDFASRLVWFDALVGNVDRTARNTNLLVWHRDPWLIDHGASLTFHH AWNGTVAQPAKPFAPIADHVLLPLATELAAVDAGLAARLTPECLQAVLAEVPDLFLAQAAEGHGDGEGDGPLADPAAHRQ AYVDYFLARLAGRQAWLQGAIDARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28211; Mature: 28211
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTITVSRYVTPLREGGSMPAVVEGDDLGVYVLKFRGAGQGVRALMAEIIAGGIARALEL CCEEEHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC PVPEIVLAQLDPALAQTEPDPEIQDLIRASAGLNVALDYLSGAVNFDPAVDRVTPDFASR CCHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCEEHHHHCCCCCCCCHHHHCCHHHHHH LVWFDALVGNVDRTARNTNLLVWHRDPWLIDHGASLTFHHAWNGTVAQPAKPFAPIADHV HHHHHHHHCCHHHCCCCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHH LLPLATELAAVDAGLAARLTPECLQAVLAEVPDLFLAQAAEGHGDGEGDGPLADPAAHRQ HHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH AYVDYFLARLAGRQAWLQGAIDARG HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRTITVSRYVTPLREGGSMPAVVEGDDLGVYVLKFRGAGQGVRALMAEIIAGGIARALEL CCEEEHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHC PVPEIVLAQLDPALAQTEPDPEIQDLIRASAGLNVALDYLSGAVNFDPAVDRVTPDFASR CCHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCEEHHHHCCCCCCCCHHHHCCHHHHHH LVWFDALVGNVDRTARNTNLLVWHRDPWLIDHGASLTFHHAWNGTVAQPAKPFAPIADHV HHHHHHHHCCHHHCCCCCCEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHH LLPLATELAAVDAGLAARLTPECLQAVLAEVPDLFLAQAAEGHGDGEGDGPLADPAAHRQ HHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH AYVDYFLARLAGRQAWLQGAIDARG HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA