| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610217
Identifier: 120610217
GI number: 120610217
Start: 1696925
End: 1697710
Strand: Direct
Name: 120610217
Synonym: Aave_1532
Alternate gene names: NA
Gene position: 1696925-1697710 (Clockwise)
Preceding gene: 120610216
Following gene: 120610218
Centisome position: 31.7
GC content: 78.88
Gene sequence:
>786_bases ATGCCCGATGCACTGATCTGGACGGCCTTCGCCATGGGCCTGGCGGGCGGGCCCCACTGCCTGGCGATGTGCGCTGCGCC TTGTGCGGCGATCGCCGGCGGGCCGCGGGGTGCCGGAGGCCCTCTGCCGGTGCCCTTGCGCCGGTTCGTCTCCGTGCCCG CCGCGGCCGGGGGAGGCCCGGCCTGCGCCGCGCCGGCCCCGGGGGGCACGCTCCGCGGGGGCGGCTTCGCGCGCACCGCG CTCTTCCACCTGGCCCGCGTGGCCGGCTACGGCCTGGCCGGCGCTGCCGCGGCGCTGGCCATGGACCGCCTGGCCTGGCT CACGCAGCAGTCCGCGGCCCTGCGGCCGGCATGGACGCTGCTGCACGTGGGCATGCTGGCCTGGGGGCTGCTGATGGCCC TGCAGGCCCGGCAGCCGCTCTGGGTGGAGCGGGCCGGCCGTGCGGTCTGGGACCGTGTCGGTCCGGCCGTGCGGGCTCCG GGCGGCCTGGCCGTGGCCGGGCTGGCCTGGGCGCTGATGCCGTGCGGGCTGCTGTATTCGGCCCTGCTCGTGGCCGCCCT GGCCGGCAGCCCGGCGCAGGGCGCCGCCACGATGGCCGCATTCGGCGGCGGCAGCGCGCTCTGGCTGCTGGGCGGTACCT GGGCGTGGCGCCGGCTCCGCTCCCGGGTGGACGCGGTGCGCGCCACCTGGGGAACGCGGTTCGCCGGGGTGCTGCTGGCG GCCGTGGCTGCCTGGGCCCTCTGGATGGACACGGCGCGCCATGCCCTGGAGGCCTGGTGTCGCTGA
Upstream 100 bases:
>100_bases CGGCGTGGCGATGGTGTTCGACCGCTATCTGCAGGCGGACCGCAACCGCGCGCGGTTCTCCCGGATCATCTGACGATCCT TTCCTTCCCGCAGGAGCCGC
Downstream 100 bases:
>100_bases AGCGGTACATTTCTCACGGGACCGGAAACAGCTGCTCACGAACTGGTGATAATGGTTTCGAATGAGAGGCGTTACGCGCC TCTTTTATTTCGTGACTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPDALIWTAFAMGLAGGPHCLAMCAAPCAAIAGGPRGAGGPLPVPLRRFVSVPAAAGGGPACAAPAPGGTLRGGGFARTA LFHLARVAGYGLAGAAAALAMDRLAWLTQQSAALRPAWTLLHVGMLAWGLLMALQARQPLWVERAGRAVWDRVGPAVRAP GGLAVAGLAWALMPCGLLYSALLVAALAGSPAQGAATMAAFGGGSALWLLGGTWAWRRLRSRVDAVRATWGTRFAGVLLA AVAAWALWMDTARHALEAWCR
Sequences:
>Translated_261_residues MPDALIWTAFAMGLAGGPHCLAMCAAPCAAIAGGPRGAGGPLPVPLRRFVSVPAAAGGGPACAAPAPGGTLRGGGFARTA LFHLARVAGYGLAGAAAALAMDRLAWLTQQSAALRPAWTLLHVGMLAWGLLMALQARQPLWVERAGRAVWDRVGPAVRAP GGLAVAGLAWALMPCGLLYSALLVAALAGSPAQGAATMAAFGGGSALWLLGGTWAWRRLRSRVDAVRATWGTRFAGVLLA AVAAWALWMDTARHALEAWCR >Mature_260_residues PDALIWTAFAMGLAGGPHCLAMCAAPCAAIAGGPRGAGGPLPVPLRRFVSVPAAAGGGPACAAPAPGGTLRGGGFARTAL FHLARVAGYGLAGAAAALAMDRLAWLTQQSAALRPAWTLLHVGMLAWGLLMALQARQPLWVERAGRAVWDRVGPAVRAPG GLAVAGLAWALMPCGLLYSALLVAALAGSPAQGAATMAAFGGGSALWLLGGTWAWRRLRSRVDAVRATWGTRFAGVLLAA VAAWALWMDTARHALEAWCR
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26583; Mature: 26451
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDALIWTAFAMGLAGGPHCLAMCAAPCAAIAGGPRGAGGPLPVPLRRFVSVPAAAGGGP CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC ACAAPAPGGTLRGGGFARTALFHLARVAGYGLAGAAAALAMDRLAWLTQQSAALRPAWTL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVGMLAWGLLMALQARQPLWVERAGRAVWDRVGPAVRAPGGLAVAGLAWALMPCGLLYS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALLVAALAGSPAQGAATMAAFGGGSALWLLGGTWAWRRLRSRVDAVRATWGTRFAGVLLA HHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAWALWMDTARHALEAWCR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDALIWTAFAMGLAGGPHCLAMCAAPCAAIAGGPRGAGGPLPVPLRRFVSVPAAAGGGP CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC ACAAPAPGGTLRGGGFARTALFHLARVAGYGLAGAAAALAMDRLAWLTQQSAALRPAWTL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVGMLAWGLLMALQARQPLWVERAGRAVWDRVGPAVRAPGGLAVAGLAWALMPCGLLYS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALLVAALAGSPAQGAATMAAFGGGSALWLLGGTWAWRRLRSRVDAVRATWGTRFAGVLLA HHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAWALWMDTARHALEAWCR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA