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The map label for this gene is popC [H]

Identifier: 120610193

GI number: 120610193

Start: 1671010

End: 1672971

Strand: Direct

Name: popC [H]

Synonym: Aave_1508

Alternate gene names: 120610193

Gene position: 1671010-1672971 (Clockwise)

Preceding gene: 120610191

Following gene: 120610194

Centisome position: 31.22

GC content: 60.86

Gene sequence:

>1962_bases
ATGCGTACGGGGATCAGAATCGTTCGCGTTGTCCGATGCTTGGGTGCATGGCCGGTTCGCTACCTGCAGCGATGCTTCGC
GCAAGTCCGGAACGGCGTTCGGTCCATTTCTAAGATACATGAAATTGCCTCGGAATTTCTCGTGAAATCATCGTTCGTAG
ATCCGTCTTCACGGCGCAGCACCACTGCCGCGGCATCCGGGGAGGGCCCCAGCACCCGGCGCCCACCCTTGACGCATCGC
TCACCGCTCGCCCGTCCGGCGGAGCTGTCTCCGAGAACTGCCGCCGGTTCACCGTATTCCGGTGCACCCGCTCCCCGGCA
AGGCTTTGCGTTCGACCGCGGAGGGCTCGCGCCGGACCGGCACAGGGTGTCGGAAACCGCCAGGAGGAGCGTGCTGGACA
CAGGCTCGGCTTCGAGGAGGGATTCTTCGGCAGGCGGTTCGGCGCTGACCGCGGCGGAAATTCGCCAGTTGCTGAGCCAG
GGCAAAAGCCGGCAGAAGGTGGTGCTCGGAAGGTTGCTGGAGGCGTGGGCAGGCCCTCTGTCCGTGAAAACCAAAATCCT
CAAAGCCCACGCGCAAGATTCCGAAATGCTGAAGCTGGAGAGGGAAAACATCAGCAGCCTGCCAAATGGCATCTCCCTGC
TGCCGCGTTTGCGTATCATCAATTTGAATGGCAATCCGTCGCTGCAGGAGTTGCCGTCCGATTTGGTCCACGCGCCTGCA
TTGGAACGAATCCAGGCCAACGAGTGTGACCTGCGCAAGTTGCCGGAAAATATTGGTGAGGCTCGCGCGCTGATCATGCT
GGACGTCAACGACAACAGGCAACTGGAAGCGTTGCCCGGATCGATGGCGGACCTTCAAAACCTCGAGGTGATAGAAGCGG
CCCGGTGTGATCTGACCCGCTTGCCGGAAGGAGGATTCGGACCGGCGGTCACCAGGATCAGTCTTCAGCACAATCCACGT
CTTGACCGATTGCCGGAAAAATTCGCCAGCGGGCCTTCCATCAAGCATTTGGATCTGGAGGGCTGCTCGCTGACGCATAT
TCCCGCCGGGGTCGCGTCCCTGCCGGAACTGAAGTGGTTGAACCTGGGGAAAAATGCAGGCTTGCAGCATATTCCGCCGC
TCCTCGACTTGAAGCGGGTGCATGTCGTGACGCGAGGCTCGCAAATCAGGTTGATGGACCTGGTTTTAAGCCAGCCCATC
AGTCCGGAGGTGCGCAAGGAGTATGAACGCAGGTTCAGGAAGGCGCAGAAGTACTGGAGCACGATTCAAAAGCGGATCGC
CACTGGCGGCGCCAACGTATCGCAGAAGGCGCGAGCGGCTCGCCTGGATGTGGATCGGGCAAGGGCTGGTGTGTCCGATA
CCGCCCGGTCCACGCTATTGGCAGGTCGCAATTGGGAAGCCGCCGACCGCCAGGTCAGGCAGTGGGTAGAGCAGGGGTAC
CCCCTGGATACCGAGCACCTCAAGCAGCTGAATGCCCTGCTGGGCAGAGATGTCCAGCCCTTCGGTGATCCCGAAGCGGT
TGAAAAATTCGAAGCCCGCTTCGGGGAGTTTCGCCGGATGCCGACCGGGTTCCCCCAAGATGGCTCAAGAGCTCTCGTTG
TGGACGAGCGGGAAGTGGGTGCTGAAATGGCCCATTTCGATGAATGGTTCGAACAGGCGTCGGCCCAGGTGGCGCAGGGG
AGAATGAATCCCGCCGAACTTTCGGCCGCGACGGTTCAGCGCTTGATCAGCATCCATCCCTTCGCCGATGCCAATGGCCG
TACAGCCCGGCTCGCGGGCGACTGGGTGCTGATGAGCCATGGTCTTCCTCCGGCCGCCAGTCCGAAGAAACTCATCATCG
TGTTTTCCGAGGGGCGCAACTTCGAGGGGCCTGAACAGGCCCTCGCTTCGACGATCCAAGGCTTGGCCAACACCGTCGAG
ATGTATGGAAGGCACCTGGGCCTGAAAATCAAAGCACCCTGA

Upstream 100 bases:

>100_bases
TGCCCTGCATGGTGTGCTCTTTTTCCTTGTTTTTGTGAGGCTGGGAGTATGGCGCCGTTGCGTGGCGTTGTCGCACAAAG
CCCCCGCCGCGGCGGTTTGC

Downstream 100 bases:

>100_bases
AGCGGGCCGGGTTCGCCCGGGGCCGATGCATTGGGCGCAGTCAGTGAGGTGGCGCAGGCCAGGCTCCCTCTCCCGGTGGG
CAGTGGGGCGGGCCCCGCTG

Product: filamentation induced by cAMP protein Fic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MRTGIRIVRVVRCLGAWPVRYLQRCFAQVRNGVRSISKIHEIASEFLVKSSFVDPSSRRSTTAAASGEGPSTRRPPLTHR
SPLARPAELSPRTAAGSPYSGAPAPRQGFAFDRGGLAPDRHRVSETARRSVLDTGSASRRDSSAGGSALTAAEIRQLLSQ
GKSRQKVVLGRLLEAWAGPLSVKTKILKAHAQDSEMLKLERENISSLPNGISLLPRLRIINLNGNPSLQELPSDLVHAPA
LERIQANECDLRKLPENIGEARALIMLDVNDNRQLEALPGSMADLQNLEVIEAARCDLTRLPEGGFGPAVTRISLQHNPR
LDRLPEKFASGPSIKHLDLEGCSLTHIPAGVASLPELKWLNLGKNAGLQHIPPLLDLKRVHVVTRGSQIRLMDLVLSQPI
SPEVRKEYERRFRKAQKYWSTIQKRIATGGANVSQKARAARLDVDRARAGVSDTARSTLLAGRNWEAADRQVRQWVEQGY
PLDTEHLKQLNALLGRDVQPFGDPEAVEKFEARFGEFRRMPTGFPQDGSRALVVDEREVGAEMAHFDEWFEQASAQVAQG
RMNPAELSAATVQRLISIHPFADANGRTARLAGDWVLMSHGLPPAASPKKLIIVFSEGRNFEGPEQALASTIQGLANTVE
MYGRHLGLKIKAP

Sequences:

>Translated_653_residues
MRTGIRIVRVVRCLGAWPVRYLQRCFAQVRNGVRSISKIHEIASEFLVKSSFVDPSSRRSTTAAASGEGPSTRRPPLTHR
SPLARPAELSPRTAAGSPYSGAPAPRQGFAFDRGGLAPDRHRVSETARRSVLDTGSASRRDSSAGGSALTAAEIRQLLSQ
GKSRQKVVLGRLLEAWAGPLSVKTKILKAHAQDSEMLKLERENISSLPNGISLLPRLRIINLNGNPSLQELPSDLVHAPA
LERIQANECDLRKLPENIGEARALIMLDVNDNRQLEALPGSMADLQNLEVIEAARCDLTRLPEGGFGPAVTRISLQHNPR
LDRLPEKFASGPSIKHLDLEGCSLTHIPAGVASLPELKWLNLGKNAGLQHIPPLLDLKRVHVVTRGSQIRLMDLVLSQPI
SPEVRKEYERRFRKAQKYWSTIQKRIATGGANVSQKARAARLDVDRARAGVSDTARSTLLAGRNWEAADRQVRQWVEQGY
PLDTEHLKQLNALLGRDVQPFGDPEAVEKFEARFGEFRRMPTGFPQDGSRALVVDEREVGAEMAHFDEWFEQASAQVAQG
RMNPAELSAATVQRLISIHPFADANGRTARLAGDWVLMSHGLPPAASPKKLIIVFSEGRNFEGPEQALASTIQGLANTVE
MYGRHLGLKIKAP
>Mature_653_residues
MRTGIRIVRVVRCLGAWPVRYLQRCFAQVRNGVRSISKIHEIASEFLVKSSFVDPSSRRSTTAAASGEGPSTRRPPLTHR
SPLARPAELSPRTAAGSPYSGAPAPRQGFAFDRGGLAPDRHRVSETARRSVLDTGSASRRDSSAGGSALTAAEIRQLLSQ
GKSRQKVVLGRLLEAWAGPLSVKTKILKAHAQDSEMLKLERENISSLPNGISLLPRLRIINLNGNPSLQELPSDLVHAPA
LERIQANECDLRKLPENIGEARALIMLDVNDNRQLEALPGSMADLQNLEVIEAARCDLTRLPEGGFGPAVTRISLQHNPR
LDRLPEKFASGPSIKHLDLEGCSLTHIPAGVASLPELKWLNLGKNAGLQHIPPLLDLKRVHVVTRGSQIRLMDLVLSQPI
SPEVRKEYERRFRKAQKYWSTIQKRIATGGANVSQKARAARLDVDRARAGVSDTARSTLLAGRNWEAADRQVRQWVEQGY
PLDTEHLKQLNALLGRDVQPFGDPEAVEKFEARFGEFRRMPTGFPQDGSRALVVDEREVGAEMAHFDEWFEQASAQVAQG
RMNPAELSAATVQRLISIHPFADANGRTARLAGDWVLMSHGLPPAASPKKLIIVFSEGRNFEGPEQALASTIQGLANTVE
MYGRHLGLKIKAP

Specific function: Probably involved in host-pathogen interactions. May interact with plant target proteins; may modulate a plant signal transduction pathway [H]

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 22 LRR (leucine-rich) repeats [H]

Homologues:

Organism=Homo sapiens, GI61742784, Length=199, Percent_Identity=32.1608040201005, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI61742786, Length=199, Percent_Identity=32.1608040201005, Blast_Score=67, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281362655, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI116007092, Length=177, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281362651, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281362657, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281362653, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI62472958, Length=177, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650334, Length=177, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650332, Length=177, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650336, Length=177, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24650330, Length=177, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI221379725, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221379722, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 71686; Mature: 71686

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGIRIVRVVRCLGAWPVRYLQRCFAQVRNGVRSISKIHEIASEFLVKSSFVDPSSRRS
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TTAAASGEGPSTRRPPLTHRSPLARPAELSPRTAAGSPYSGAPAPRQGFAFDRGGLAPDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
HRVSETARRSVLDTGSASRRDSSAGGSALTAAEIRQLLSQGKSRQKVVLGRLLEAWAGPL
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
SVKTKILKAHAQDSEMLKLERENISSLPNGISLLPRLRIINLNGNPSLQELPSDLVHAPA
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHCHH
LERIQANECDLRKLPENIGEARALIMLDVNDNRQLEALPGSMADLQNLEVIEAARCDLTR
HHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCHHHHHCCHHHHHHHCCHHC
LPEGGFGPAVTRISLQHNPRLDRLPEKFASGPSIKHLDLEGCSLTHIPAGVASLPELKWL
CCCCCCCCHHEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCEECCCCCHHCCCCCCEE
NLGKNAGLQHIPPLLDLKRVHVVTRGSQIRLMDLVLSQPISPEVRKEYERRFRKAQKYWS
CCCCCCCCCCCCCHHHHHHHHEEECCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
TIQKRIATGGANVSQKARAARLDVDRARAGVSDTARSTLLAGRNWEAADRQVRQWVEQGY
HHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PLDTEHLKQLNALLGRDVQPFGDPEAVEKFEARFGEFRRMPTGFPQDGSRALVVDEREVG
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHH
AEMAHFDEWFEQASAQVAQGRMNPAELSAATVQRLISIHPFADANGRTARLAGDWVLMSH
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEC
GLPPAASPKKLIIVFSEGRNFEGPEQALASTIQGLANTVEMYGRHLGLKIKAP
CCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MRTGIRIVRVVRCLGAWPVRYLQRCFAQVRNGVRSISKIHEIASEFLVKSSFVDPSSRRS
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TTAAASGEGPSTRRPPLTHRSPLARPAELSPRTAAGSPYSGAPAPRQGFAFDRGGLAPDR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
HRVSETARRSVLDTGSASRRDSSAGGSALTAAEIRQLLSQGKSRQKVVLGRLLEAWAGPL
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
SVKTKILKAHAQDSEMLKLERENISSLPNGISLLPRLRIINLNGNPSLQELPSDLVHAPA
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHCHH
LERIQANECDLRKLPENIGEARALIMLDVNDNRQLEALPGSMADLQNLEVIEAARCDLTR
HHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCHHHHHCCHHHHHHHCCHHC
LPEGGFGPAVTRISLQHNPRLDRLPEKFASGPSIKHLDLEGCSLTHIPAGVASLPELKWL
CCCCCCCCHHEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCEECCCCCHHCCCCCCEE
NLGKNAGLQHIPPLLDLKRVHVVTRGSQIRLMDLVLSQPISPEVRKEYERRFRKAQKYWS
CCCCCCCCCCCCCHHHHHHHHEEECCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
TIQKRIATGGANVSQKARAARLDVDRARAGVSDTARSTLLAGRNWEAADRQVRQWVEQGY
HHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PLDTEHLKQLNALLGRDVQPFGDPEAVEKFEARFGEFRRMPTGFPQDGSRALVVDEREVG
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHH
AEMAHFDEWFEQASAQVAQGRMNPAELSAATVQRLISIHPFADANGRTARLAGDWVLMSH
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEC
GLPPAASPKKLIIVFSEGRNFEGPEQALASTIQGLANTVEMYGRHLGLKIKAP
CCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10792715; 11823852 [H]