Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609567

Identifier: 120609567

GI number: 120609567

Start: 949097

End: 949864

Strand: Reverse

Name: 120609567

Synonym: Aave_0873

Alternate gene names: NA

Gene position: 949864-949097 (Counterclockwise)

Preceding gene: 120609568

Following gene: 120609566

Centisome position: 17.75

GC content: 74.35

Gene sequence:

>768_bases
ATGCCTCCTGATCATCCGCTGCCGCGCCATGGCGCACGCCCCCGCGCCGGTGCCGCGCGCCCCGCAGGGGCGCACCTGGC
GCACCTGACGCATCTGGCAATAGCGACCGCATTGGCCCTGCTGGCCGGCTGCGCTGCCGCGCCCGAGCCCGCGCCGGCCG
AACCGGTGCCGGCAGTCCCCGCTGCCGTGCCGGAACCCTCTCCCGCGCCCGCGGAGGAGCCGGACAAACCCGACGCGGAC
GCCGTAAGCATGCCGTCCGCGGAGGGCAGCGCCCCGGCAAACGCCGAGTCCGCCCGTCCACCCGCTTCGCTGCCGCGCCA
GATGCTGCTGTACGCCGACCGCATCCGCAGCCTGCCGCCGCCCGAACTCATGGCCGAGATCGCCCGCCTGTCGGACGCCC
AGGCCAATGCCGGCAGCCCCCCGGAAAAATCGTTCCAGCTGGCCCTGGTGCTGCTGCAGACGCGGCAGCCGGCCGACACC
GCGCGCTCGCTGGGCCTGGTGCAGAAGCTGCTGTCCGACAACCGGCCGGCCGCAACATCGTTGCAGCCGCTGGCACGGTT
GCTCGAGAACCGCCTGCTCCAGCAGCGCCGGCTGGAAGACCAGCTGGACCGCCAGTCGCAGCAGCTCAAGGACGGGCAGC
GCCGCATCGACCAGCTGAACGAGCGCCTGGAGGCGATGCGCGCCATCGAGCGCAGCCTCAATGCCCGCCCGGGCGCCCCC
GGCAACGGCCGGGCCGCGCACCCCGCACCGACCGAATCCCCCCGCTGA

Upstream 100 bases:

>100_bases
ATCGGCCTGTCCATCGTCCAGGAGTACGTCGCCGCCCATGGCGGACGCGTGAGCCTCGTCGAAGCCGGCGAACGTACACC
CTTCCGCATCGAACTGCCCC

Downstream 100 bases:

>100_bases
ACCGGCCCCGAGCATGCCCGCCACGCCCCCGACGAAAACCTCCGCGCCCCGTCCACGCATCCTCGTGGTGGACGACGATG
CCGACATGCTGCGGCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPPDHPLPRHGARPRAGAARPAGAHLAHLTHLAIATALALLAGCAAAPEPAPAEPVPAVPAAVPEPSPAPAEEPDKPDAD
AVSMPSAEGSAPANAESARPPASLPRQMLLYADRIRSLPPPELMAEIARLSDAQANAGSPPEKSFQLALVLLQTRQPADT
ARSLGLVQKLLSDNRPAATSLQPLARLLENRLLQQRRLEDQLDRQSQQLKDGQRRIDQLNERLEAMRAIERSLNARPGAP
GNGRAAHPAPTESPR

Sequences:

>Translated_255_residues
MPPDHPLPRHGARPRAGAARPAGAHLAHLTHLAIATALALLAGCAAAPEPAPAEPVPAVPAAVPEPSPAPAEEPDKPDAD
AVSMPSAEGSAPANAESARPPASLPRQMLLYADRIRSLPPPELMAEIARLSDAQANAGSPPEKSFQLALVLLQTRQPADT
ARSLGLVQKLLSDNRPAATSLQPLARLLENRLLQQRRLEDQLDRQSQQLKDGQRRIDQLNERLEAMRAIERSLNARPGAP
GNGRAAHPAPTESPR
>Mature_254_residues
PPDHPLPRHGARPRAGAARPAGAHLAHLTHLAIATALALLAGCAAAPEPAPAEPVPAVPAAVPEPSPAPAEEPDKPDADA
VSMPSAEGSAPANAESARPPASLPRQMLLYADRIRSLPPPELMAEIARLSDAQANAGSPPEKSFQLALVLLQTRQPADTA
RSLGLVQKLLSDNRPAATSLQPLARLLENRLLQQRRLEDQLDRQSQQLKDGQRRIDQLNERLEAMRAIERSLNARPGAPG
NGRAAHPAPTESPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26997; Mature: 26866

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPDHPLPRHGARPRAGAARPAGAHLAHLTHLAIATALALLAGCAAAPEPAPAEPVPAVP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AAVPEPSPAPAEEPDKPDADAVSMPSAEGSAPANAESARPPASLPRQMLLYADRIRSLPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PELMAEIARLSDAQANAGSPPEKSFQLALVLLQTRQPADTARSLGLVQKLLSDNRPAATS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
LQPLARLLENRLLQQRRLEDQLDRQSQQLKDGQRRIDQLNERLEAMRAIERSLNARPGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GNGRAAHPAPTESPR
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPDHPLPRHGARPRAGAARPAGAHLAHLTHLAIATALALLAGCAAAPEPAPAEPVPAVP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AAVPEPSPAPAEEPDKPDADAVSMPSAEGSAPANAESARPPASLPRQMLLYADRIRSLPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PELMAEIARLSDAQANAGSPPEKSFQLALVLLQTRQPADTARSLGLVQKLLSDNRPAATS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
LQPLARLLENRLLQQRRLEDQLDRQSQQLKDGQRRIDQLNERLEAMRAIERSLNARPGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GNGRAAHPAPTESPR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA