| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is opgH [H]
Identifier: 120609565
GI number: 120609565
Start: 945291
End: 947375
Strand: Reverse
Name: opgH [H]
Synonym: Aave_0871
Alternate gene names: 120609565
Gene position: 947375-945291 (Counterclockwise)
Preceding gene: 120609566
Following gene: 120609563
Centisome position: 17.7
GC content: 70.41
Gene sequence:
>2085_bases ATGGAATCCCTATCCTCCCGACCGGCAGCCGCGCCCCGCAACACCGCGGGCACGCCCGCTCCCGCCGTGGTGGCGCGCCG TGGCGCACGCTACCCCCGACCGGTGGAATCGTCGCGCAGCACCCTGCGCGAAGACCGCCATCCCAATTCGCTCACCGCAC CGCCCGTGCATCGCGGCTCCATGGCGCCGCTGCCCTGGCGCGGCTTCTGGAACAGCATCGGCACCGCCGTGCTGATGCGC CTCAATGGCCGCAAGGCCTCCCCAGCCACGGCACCCGCCGCGCCGCAGGAGCCCTGGGAGCGCGCCGCCCGCCAGCGCCG CAACATCTTCCTGCTGCTGGCCCTCGCTACCAGCGCCCTGGCCACGACGCTCTTCGCCGGCGTGCAGCCCAGCTATGACA GCGCCTGGCTCGAATACGGCCAGCTCGCCCTCTTCGCCCTGCTCTCCACCTGGGTGGTGACCGGCTTCCTCACGGCCATG ATGGGCTTCTGGGTGATGCTGCGCGGCGACCGCCACGCCCTGTCGGCGAAAAGCGTCCGCAACGACGTACTGAGCCCCGA CGCCCGCACCGCGATCATCATGCCGATCTGCAACGAGGACGTGGCCACGGTGTTCGCCGGCCTGCGCGCCACCTGCGAAT CGGTGGCCGCCACGGGCCATGCGAAGACCTTCGACGTCTTCGTGCTCTCCGACAGCTATGACCCCGAGATCGCCGCCGCC GAGCGCGCCGCCTGGGAAGAACTGCGCGCCGTGCTGGCCGCCAACGCCAACCAGCCGCAGGTCGAGGTGTACTACCGCCT GCGCACCCGCCGCAGCCACCGCAAGGCCGGCAACGTGGCCGATTTCTGCCGCCGCTGGGGCAAGGACTACAAGTACATGG TGGTCCTCGACGCCGACAGCGTGATGAGCGGCGACTGCATCGTCTCCATGGCCAAGCTCATGGAAGCCCATCCGCGTGCC GGCATCATCCAGACCGCCACGCAGGCCATCGGCCACGTCACGCTGCACGCCCGTGCCCAGCAGTTCGCCTCGCGCGTCAC CGGCCGGCTGTTCACGCTGGGCATGCAGTTCTGGCAGCTCGGCGAATCCCACTACTGGGGCCACAACGCCATCATCCGCG TGAAGCCCTTCATGGACCACTGCGCCCTGGCCCCCATCAAGGGCACGGGCGGCATGAGCGGCGGCATCATGAGCCACGAC TTCGTCGAGGCCGCGCTGATGCGCCGTGCCGGCTACCACGTGTGGCTGGTGTCCGACCTGGTGGGCAGCTACGAACAGCA GCCGCCGGACCTGCTGTCCGAGCTGCAGCGCGACCGCCGCTGGTGCCAGGGCAACCTGCAGAACGCCCGCCTGATGGCGG AACCCGGCATCCATCCCGTGCACCGCGCCATGTTCGTCACCGGCGCCATGGCCTACCTCTCGGCCCCGCTGTGGCTTGCC TTCATCACCTTCGGCACCGTGCTGTGGCTCTCCGGCGCCCGCCTCGTGGCCGACTGGAACGTGCTGCCCGGCGAACTGAT GGCCCTGTGGGCGTGGACGCTGTGCATGCTGTTCCTGCCCCGCGTGCTGGGCGTGGCCGCCATCCTCATGAAGGGCGAGC AGAAGCAATACGGCGGCATGGCCAGCGTGTTCAAGAGCGCCGCGCTGGAAAGCGCCATGGCCATCCTGCAGGCGCCCATC CGCATGCTCGGCCACTCGCTCTTCGTGATCGTCGCCCTGACCGGCCTCAAGCTCGACTGGAAGTCGCCCCCCCGCGAAGC CAATGCCGTGCCCTGGAAGGACGCCCTGCGCCAGCTGGCCCCGATGAGCCTCGTGATCGCCCTGCTGGGCGTGGGCGTGG CGCTGATCGACCCCACCGCGCTGGTCTGGCTGATGCCCGTGGGCCTGCCGCTGGTGATGGCCATTCCCCTGGTGGTGCTG TCCAGCCAGATCGCCCTCGGCCGCACCCTGCGCGCCCAGCGCCTGCTGCTGATCCCCGAAGAGGCCTGGTCGCCGCCCGT GCTGCGCCGCGCCTGGATGCACGCCACCCAGCTGAAGAACGGCGGCCCGCTGCGCCAGCCCGCGCCGCTGCTCAAGGCGG CCTGA
Upstream 100 bases:
>100_bases CTACTCCCCCTCCAGCGCTGCGCCGACACCGGCCGCAACGCGTTCGCGAGAGGGTTACGCACCTGTCTTCCTGGAACACC ACAACCGAGTGAGCACAACC
Downstream 100 bases:
>100_bases GGGACCGATTGCCCCTCGTGCGCGCACGGCGCGCACTTTCAAGCCGGCCCCCTGGGCCGGCTTTTTTCATGGGCGGCCGG CAGGGCTGCACCCAAAGAAA
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MESLSSRPAAAPRNTAGTPAPAVVARRGARYPRPVESSRSTLREDRHPNSLTAPPVHRGSMAPLPWRGFWNSIGTAVLMR LNGRKASPATAPAAPQEPWERAARQRRNIFLLLALATSALATTLFAGVQPSYDSAWLEYGQLALFALLSTWVVTGFLTAM MGFWVMLRGDRHALSAKSVRNDVLSPDARTAIIMPICNEDVATVFAGLRATCESVAATGHAKTFDVFVLSDSYDPEIAAA ERAAWEELRAVLAANANQPQVEVYYRLRTRRSHRKAGNVADFCRRWGKDYKYMVVLDADSVMSGDCIVSMAKLMEAHPRA GIIQTATQAIGHVTLHARAQQFASRVTGRLFTLGMQFWQLGESHYWGHNAIIRVKPFMDHCALAPIKGTGGMSGGIMSHD FVEAALMRRAGYHVWLVSDLVGSYEQQPPDLLSELQRDRRWCQGNLQNARLMAEPGIHPVHRAMFVTGAMAYLSAPLWLA FITFGTVLWLSGARLVADWNVLPGELMALWAWTLCMLFLPRVLGVAAILMKGEQKQYGGMASVFKSAALESAMAILQAPI RMLGHSLFVIVALTGLKLDWKSPPREANAVPWKDALRQLAPMSLVIALLGVGVALIDPTALVWLMPVGLPLVMAIPLVVL SSQIALGRTLRAQRLLLIPEEAWSPPVLRRAWMHATQLKNGGPLRQPAPLLKAA
Sequences:
>Translated_694_residues MESLSSRPAAAPRNTAGTPAPAVVARRGARYPRPVESSRSTLREDRHPNSLTAPPVHRGSMAPLPWRGFWNSIGTAVLMR LNGRKASPATAPAAPQEPWERAARQRRNIFLLLALATSALATTLFAGVQPSYDSAWLEYGQLALFALLSTWVVTGFLTAM MGFWVMLRGDRHALSAKSVRNDVLSPDARTAIIMPICNEDVATVFAGLRATCESVAATGHAKTFDVFVLSDSYDPEIAAA ERAAWEELRAVLAANANQPQVEVYYRLRTRRSHRKAGNVADFCRRWGKDYKYMVVLDADSVMSGDCIVSMAKLMEAHPRA GIIQTATQAIGHVTLHARAQQFASRVTGRLFTLGMQFWQLGESHYWGHNAIIRVKPFMDHCALAPIKGTGGMSGGIMSHD FVEAALMRRAGYHVWLVSDLVGSYEQQPPDLLSELQRDRRWCQGNLQNARLMAEPGIHPVHRAMFVTGAMAYLSAPLWLA FITFGTVLWLSGARLVADWNVLPGELMALWAWTLCMLFLPRVLGVAAILMKGEQKQYGGMASVFKSAALESAMAILQAPI RMLGHSLFVIVALTGLKLDWKSPPREANAVPWKDALRQLAPMSLVIALLGVGVALIDPTALVWLMPVGLPLVMAIPLVVL SSQIALGRTLRAQRLLLIPEEAWSPPVLRRAWMHATQLKNGGPLRQPAPLLKAA >Mature_694_residues MESLSSRPAAAPRNTAGTPAPAVVARRGARYPRPVESSRSTLREDRHPNSLTAPPVHRGSMAPLPWRGFWNSIGTAVLMR LNGRKASPATAPAAPQEPWERAARQRRNIFLLLALATSALATTLFAGVQPSYDSAWLEYGQLALFALLSTWVVTGFLTAM MGFWVMLRGDRHALSAKSVRNDVLSPDARTAIIMPICNEDVATVFAGLRATCESVAATGHAKTFDVFVLSDSYDPEIAAA ERAAWEELRAVLAANANQPQVEVYYRLRTRRSHRKAGNVADFCRRWGKDYKYMVVLDADSVMSGDCIVSMAKLMEAHPRA GIIQTATQAIGHVTLHARAQQFASRVTGRLFTLGMQFWQLGESHYWGHNAIIRVKPFMDHCALAPIKGTGGMSGGIMSHD FVEAALMRRAGYHVWLVSDLVGSYEQQPPDLLSELQRDRRWCQGNLQNARLMAEPGIHPVHRAMFVTGAMAYLSAPLWLA FITFGTVLWLSGARLVADWNVLPGELMALWAWTLCMLFLPRVLGVAAILMKGEQKQYGGMASVFKSAALESAMAILQAPI RMLGHSLFVIVALTGLKLDWKSPPREANAVPWKDALRQLAPMSLVIALLGVGVALIDPTALVWLMPVGLPLVMAIPLVVL SSQIALGRTLRAQRLLLIPEEAWSPPVLRRAWMHATQLKNGGPLRQPAPLLKAA
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=696, Percent_Identity=45.4022988505747, Blast_Score=563, Evalue=1e-161,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 76074; Mature: 76074
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLSSRPAAAPRNTAGTPAPAVVARRGARYPRPVESSRSTLREDRHPNSLTAPPVHRGS CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC MAPLPWRGFWNSIGTAVLMRLNGRKASPATAPAAPQEPWERAARQRRNIFLLLALATSAL CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEHHHHHHHHH ATTLFAGVQPSYDSAWLEYGQLALFALLSTWVVTGFLTAMMGFWVMLRGDRHALSAKSVR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NDVLSPDARTAIIMPICNEDVATVFAGLRATCESVAATGHAKTFDVFVLSDSYDPEIAAA HHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHH ERAAWEELRAVLAANANQPQVEVYYRLRTRRSHRKAGNVADFCRRWGKDYKYMVVLDADS HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCC VMSGDCIVSMAKLMEAHPRAGIIQTATQAIGHVTLHARAQQFASRVTGRLFTLGMQFWQL CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GESHYWGHNAIIRVKPFMDHCALAPIKGTGGMSGGIMSHDFVEAALMRRAGYHVWLVSDL CCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHH VGSYEQQPPDLLSELQRDRRWCQGNLQNARLMAEPGIHPVHRAMFVTGAMAYLSAPLWLA HCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH FITFGTVLWLSGARLVADWNVLPGELMALWAWTLCMLFLPRVLGVAAILMKGEQKQYGGM HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCH ASVFKSAALESAMAILQAPIRMLGHSLFVIVALTGLKLDWKSPPREANAVPWKDALRQLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHH PMSLVIALLGVGVALIDPTALVWLMPVGLPLVMAIPLVVLSSQIALGRTLRAQRLLLIPE HHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC EAWSPPVLRRAWMHATQLKNGGPLRQPAPLLKAA CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCC >Mature Secondary Structure MESLSSRPAAAPRNTAGTPAPAVVARRGARYPRPVESSRSTLREDRHPNSLTAPPVHRGS CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC MAPLPWRGFWNSIGTAVLMRLNGRKASPATAPAAPQEPWERAARQRRNIFLLLALATSAL CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEHHHHHHHHH ATTLFAGVQPSYDSAWLEYGQLALFALLSTWVVTGFLTAMMGFWVMLRGDRHALSAKSVR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NDVLSPDARTAIIMPICNEDVATVFAGLRATCESVAATGHAKTFDVFVLSDSYDPEIAAA HHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHH ERAAWEELRAVLAANANQPQVEVYYRLRTRRSHRKAGNVADFCRRWGKDYKYMVVLDADS HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCC VMSGDCIVSMAKLMEAHPRAGIIQTATQAIGHVTLHARAQQFASRVTGRLFTLGMQFWQL CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GESHYWGHNAIIRVKPFMDHCALAPIKGTGGMSGGIMSHDFVEAALMRRAGYHVWLVSDL CCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHH VGSYEQQPPDLLSELQRDRRWCQGNLQNARLMAEPGIHPVHRAMFVTGAMAYLSAPLWLA HCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH FITFGTVLWLSGARLVADWNVLPGELMALWAWTLCMLFLPRVLGVAAILMKGEQKQYGGM HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCH ASVFKSAALESAMAILQAPIRMLGHSLFVIVALTGLKLDWKSPPREANAVPWKDALRQLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHH PMSLVIALLGVGVALIDPTALVWLMPVGLPLVMAIPLVVLSSQIALGRTLRAQRLLLIPE HHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC EAWSPPVLRRAWMHATQLKNGGPLRQPAPLLKAA CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA