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The map label for this gene is ynbB [H]

Identifier: 120609528

GI number: 120609528

Start: 904821

End: 905825

Strand: Reverse

Name: ynbB [H]

Synonym: Aave_0834

Alternate gene names: 120609528

Gene position: 905825-904821 (Counterclockwise)

Preceding gene: 120609529

Following gene: 120609527

Centisome position: 16.92

GC content: 69.45

Gene sequence:

>1005_bases
ATGATGGACACGCTCCGCCACCTCACCACCACGCAGCAGATCGGCGCGCTGTTCGTGGCCATGTTCGGCCTGCTGTCGCT
GGTCACTCTCTACGCCTTCTTCCAGACCCTGCGCGAGGCGCGCGGGCCCGGCCCGGAAGACCAGGCCGCGCACGAGGCGC
ACCAGCAGGAATGGCGCCGGTTCTGGAGCCTGCTGAAGACCTCCTGGGTCATGGCGACGGTGTTCTGGGTGGGCTGGGCC
CTGGGCGACACGGTCGCCACGGTGCTGTTCGCCATCGTCGCCTTCCTCGCACTGCGCGAGTTCATCACGCTCTCGCCCAC
GCGGCGGGGCGACCACCGCAGCCTCGCGCTGGCGTTCTTCGTCGTGCTGCCGCTGCAGTTCGCCATCGTGGGGATGCGCA
AGTTCGACCTGCTGACGGTGTTCATACCGGTCTATGTCTTCCTCGCGCTGCCGGTGGCCAGCGCGCTGGCCAACGATCCC
GAACGCTTCCTGGAGCGCAACGCCAAGCTGCAGTGGGGCATCATGGTCTGCGTGTACGGCATGAGCCACGTGCCCGCGCT
GCTGCTGCTGGACTTCCCGAACTACGAGGGCCGGGGTGCCTTCCTCGTCTTCTTCCTCGTGGCCGTGGTGCAGACCAGCG
TGATCGCGCAGCACCTGCTGGGCCGGCGCTTCCCGCACCACCCCGTCGCCCCGCGGGTGAGCCAGAGCTTCCAGTGGCTG
AGCTGGATCGTCGGCGTGGCAGTGGGCGGGCTGGCCGGCGTGGCGCTGTCGTTCATCACACCGTTCAAGGCCGGGCAGGC
GCTCGGCATGGCGCTGCTGGCCTGCCTGGCGGGCACGCTCGGCCACCTCGTGATGAAGGCCCTCAAGCGCGACCGCGGCG
TGACCAGCTGGGGCCTGCAGGGCCAGTCCACCACCGGGGCGGGCGGCCTGCTGGACCGCGTGGACGCGCTGTGCTTCGCG
GGCCCCGTGTTCTTTCATTCGGCCCGCTGGTACTTCGGCCTGTGA

Upstream 100 bases:

>100_bases
GACGTTCGGCGCCCCCATCGAACTGGGCGCGGGCGAGGAACGCCGCGCATTCCTCGACCGCGCCCGGCGCGCGGTGATCG
CCCTGCGGGAGGTGTGATCC

Downstream 100 bases:

>100_bases
ACGGCATCCCATGAGAATCCTGGGCATCGATCCCGGCCTGCAGACCACCGGCTTCGGCGTGGTGGACGTGGACGGCCACC
ATTTGAGCTACGTGGCCAGC

Product: phosphatidate cytidylyltransferase

Products: diphosphate; CDPdiacylglycerol

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MMDTLRHLTTTQQIGALFVAMFGLLSLVTLYAFFQTLREARGPGPEDQAAHEAHQQEWRRFWSLLKTSWVMATVFWVGWA
LGDTVATVLFAIVAFLALREFITLSPTRRGDHRSLALAFFVVLPLQFAIVGMRKFDLLTVFIPVYVFLALPVASALANDP
ERFLERNAKLQWGIMVCVYGMSHVPALLLLDFPNYEGRGAFLVFFLVAVVQTSVIAQHLLGRRFPHHPVAPRVSQSFQWL
SWIVGVAVGGLAGVALSFITPFKAGQALGMALLACLAGTLGHLVMKALKRDRGVTSWGLQGQSTTGAGGLLDRVDALCFA
GPVFFHSARWYFGL

Sequences:

>Translated_334_residues
MMDTLRHLTTTQQIGALFVAMFGLLSLVTLYAFFQTLREARGPGPEDQAAHEAHQQEWRRFWSLLKTSWVMATVFWVGWA
LGDTVATVLFAIVAFLALREFITLSPTRRGDHRSLALAFFVVLPLQFAIVGMRKFDLLTVFIPVYVFLALPVASALANDP
ERFLERNAKLQWGIMVCVYGMSHVPALLLLDFPNYEGRGAFLVFFLVAVVQTSVIAQHLLGRRFPHHPVAPRVSQSFQWL
SWIVGVAVGGLAGVALSFITPFKAGQALGMALLACLAGTLGHLVMKALKRDRGVTSWGLQGQSTTGAGGLLDRVDALCFA
GPVFFHSARWYFGL
>Mature_334_residues
MMDTLRHLTTTQQIGALFVAMFGLLSLVTLYAFFQTLREARGPGPEDQAAHEAHQQEWRRFWSLLKTSWVMATVFWVGWA
LGDTVATVLFAIVAFLALREFITLSPTRRGDHRSLALAFFVVLPLQFAIVGMRKFDLLTVFIPVYVFLALPVASALANDP
ERFLERNAKLQWGIMVCVYGMSHVPALLLLDFPNYEGRGAFLVFFLVAVVQTSVIAQHLLGRRFPHHPVAPRVSQSFQWL
SWIVGVAVGGLAGVALSFITPFKAGQALGMALLACLAGTLGHLVMKALKRDRGVTSWGLQGQSTTGAGGLLDRVDALCFA
GPVFFHSARWYFGL

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=242, Percent_Identity=35.9504132231405, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: 2.7.7.41

Molecular weight: Translated: 36868; Mature: 36868

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDTLRHLTTTQQIGALFVAMFGLLSLVTLYAFFQTLREARGPGPEDQAAHEAHQQEWRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FWSLLKTSWVMATVFWVGWALGDTVATVLFAIVAFLALREFITLSPTRRGDHRSLALAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VVLPLQFAIVGMRKFDLLTVFIPVYVFLALPVASALANDPERFLERNAKLQWGIMVCVYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH
MSHVPALLLLDFPNYEGRGAFLVFFLVAVVQTSVIAQHLLGRRFPHHPVAPRVSQSFQWL
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SWIVGVAVGGLAGVALSFITPFKAGQALGMALLACLAGTLGHLVMKALKRDRGVTSWGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GQSTTGAGGLLDRVDALCFAGPVFFHSARWYFGL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MMDTLRHLTTTQQIGALFVAMFGLLSLVTLYAFFQTLREARGPGPEDQAAHEAHQQEWRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FWSLLKTSWVMATVFWVGWALGDTVATVLFAIVAFLALREFITLSPTRRGDHRSLALAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
VVLPLQFAIVGMRKFDLLTVFIPVYVFLALPVASALANDPERFLERNAKLQWGIMVCVYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH
MSHVPALLLLDFPNYEGRGAFLVFFLVAVVQTSVIAQHLLGRRFPHHPVAPRVSQSFQWL
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SWIVGVAVGGLAGVALSFITPFKAGQALGMALLACLAGTLGHLVMKALKRDRGVTSWGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GQSTTGAGGLLDRVDALCFAGPVFFHSARWYFGL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; phosphatidate

Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]