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The map label for this gene is hslV [H]

Identifier: 120609504

GI number: 120609504

Start: 875939

End: 876523

Strand: Direct

Name: hslV [H]

Synonym: Aave_0810

Alternate gene names: 120609504

Gene position: 875939-876523 (Clockwise)

Preceding gene: 120609503

Following gene: 120609505

Centisome position: 16.36

GC content: 68.21

Gene sequence:

>585_bases
TTGCAATCCGGGCCTCCACCCCCAATTCCGGACGCTATGGAACAGTTTCACGGCACCACCATCCTCAGCGTCCGCCGCCA
GGCCGCGGACGGCACCATCCAGGTCGCCATCGGCGGCGACGGGCAGGTCACGCTCGGCAACATCGTCGTCAAGGGGTCGG
CGCGCAAAGTGCGCAAGCTGCACCACGGCAAGGTGCTGGCGGGCTTCGCGGGCGCCACGGCCGATGCCTTCACGCTGTTC
GAGCGCTTCGAGGGCAAGCTGGAGAAGCACCAGGGCCACCTGACCCGTGCCGCCATCGAGCTGACCAAGGACTGGCGCAC
CGACCGCGTGCTGCGCCGCCTGGAGGCCATGCTGGCCGTGGCCGATGCGAGCGCCTCGCTCATCATCACCGGCAACGGCG
ACGTGCTGGAGCCCGAGCAGGGCATCGTGGCCATCGGCTCCGGCGGCGCCTACGCGCATTCCGCCGCCAAGGCCTTGCTG
AACCACACCGAGCTGTCCGCCGAGGAGATCGTGCGCAAGTCGCTCGCCATCGCGGGCGAACTGTGCATCTACACGAACAT
GCACCACACCGTCGAAACGCTCTGA

Upstream 100 bases:

>100_bases
GTTCTTCAACGTCATCGGCATCCAGGAACACGCGCGCGTCGTTCCGCGGCAGAACTGAGTCCTTCCCCATGGGCCGGCAC
GCAGGCCGGCCGGGGGACTG

Downstream 100 bases:

>100_bases
CGCCCCGCGTCGTCCTTCCGCCGAGAGCGGCGGGCTGCCCGTGGGCCGCCCGCCGTGTCCCCTTCCTGCCGGTTCCCGGC
CCGTTCCGTCCCGAGTGAAC

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQSGPPPPIPDAMEQFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATADAFTLF
ERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALL
NHTELSAEEIVRKSLAIAGELCIYTNMHHTVETL

Sequences:

>Translated_194_residues
MQSGPPPPIPDAMEQFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATADAFTLF
ERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALL
NHTELSAEEIVRKSLAIAGELCIYTNMHHTVETL
>Mature_194_residues
MQSGPPPPIPDAMEQFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATADAFTLF
ERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALL
NHTELSAEEIVRKSLAIAGELCIYTNMHHTVETL

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=176, Percent_Identity=67.0454545454545, Blast_Score=241, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.- [C]

Molecular weight: Translated: 20634; Mature: 20634

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGPPPPIPDAMEQFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKL
CCCCCCCCCHHHHHHHCCCHHEEHHHHCCCCEEEEEECCCCCEEEEEEEEECCHHHHHHH
HHGKVLAGFAGATADAFTLFERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAV
HCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ADASASLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEEIVRKSLAIAGE
HCCCCEEEEECCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LCIYTNMHHTVETL
EEEEECCHHHHHCC
>Mature Secondary Structure
MQSGPPPPIPDAMEQFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKL
CCCCCCCCCHHHHHHHCCCHHEEHHHHCCCCEEEEEECCCCCEEEEEEEEECCHHHHHHH
HHGKVLAGFAGATADAFTLFERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAV
HCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ADASASLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEEIVRKSLAIAGE
HCCCCEEEEECCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LCIYTNMHHTVETL
EEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA