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The map label for this gene is dksA [H]

Identifier: 120609502

GI number: 120609502

Start: 873502

End: 873999

Strand: Direct

Name: dksA [H]

Synonym: Aave_0808

Alternate gene names: 120609502

Gene position: 873502-873999 (Clockwise)

Preceding gene: 120609501

Following gene: 120609503

Centisome position: 16.32

GC content: 66.06

Gene sequence:

>498_bases
ATGCCTACGACCCTGCAAGCGCAATCGCCCGTCGCGGCCGCCAAGAAAGACCCGAAGCTGGCCAACAACTGGAAGACCAA
GCCGGCCGAGGAGCTGTCCGACGCCGAGGTGCTTTCCATGCCCGACAGCGAATACATGAACGAGAAGCAGCTGGCCTTCT
TCCGGCACAAGCTCGTGCAGCTCAAGCAGGACATGCACAACAACGCGGGCGAGACCACCGAGCACCTGCGCGAGGACACC
GTGGTGGTGCCCGATCCGGCCGACCGCGCCACCATCGAGGAAGAGCACGCCCTGGAGCTGCGCACCCGCGACCGCGAACG
CAAGCTGCTCAAGAAGATCGAGCAGTCCATCGCGCGCATCGATGCGGGCGACTACGGCTACTGCGACGAGACCGGCGAGC
CCATCGGCGTCGGCCGCCTCCTGGCGCGCCCCACGGCGACCCTGTCCCTGGAAGCGCAGCAGCGCCGGGAATTGAAGCAG
AAGATGTTCGGCGACTGA

Upstream 100 bases:

>100_bases
GTCGTAGGAGGCGGCCTTCTTCCCGTTTGGAGCAATTGACCGTACCATCCACGGCACCGTCGCCGGCCACCCCGCCGGCG
CAGCCAGCCTAATACACATC

Downstream 100 bases:

>100_bases
CGGCCCCGCGACCGGCCCGATCCACCGTTTCCCGCACTTCTGCGCCCGACCCCGTGCCGAGGCGCGTGCCCTCCAGCCAC
GACCACCCATGAGCAAGGAA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPTTLQAQSPVAAAKKDPKLANNWKTKPAEELSDAEVLSMPDSEYMNEKQLAFFRHKLVQLKQDMHNNAGETTEHLREDT
VVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRRELKQ
KMFGD

Sequences:

>Translated_165_residues
MPTTLQAQSPVAAAKKDPKLANNWKTKPAEELSDAEVLSMPDSEYMNEKQLAFFRHKLVQLKQDMHNNAGETTEHLREDT
VVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRRELKQ
KMFGD
>Mature_164_residues
PTTLQAQSPVAAAKKDPKLANNWKTKPAEELSDAEVLSMPDSEYMNEKQLAFFRHKLVQLKQDMHNNAGETTEHLREDTV
VVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIARIDAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRRELKQK
MFGD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=121, Percent_Identity=45.4545454545455, Blast_Score=116, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 18712; Mature: 18581

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTLQAQSPVAAAKKDPKLANNWKTKPAEELSDAEVLSMPDSEYMNEKQLAFFRHKLVQ
CCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCHHHCCCCHHHHCHHHHHHHHHHHHH
LKQDMHNNAGETTEHLREDTVVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIARI
HHHHHCCCCCHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRRELKQKMFGD
CCCCCCCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTTLQAQSPVAAAKKDPKLANNWKTKPAEELSDAEVLSMPDSEYMNEKQLAFFRHKLVQ
CCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCHHHCCCCHHHHCHHHHHHHHHHHHH
LKQDMHNNAGETTEHLREDTVVVPDPADRATIEEEHALELRTRDRERKLLKKIEQSIARI
HHHHHCCCCCHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRRELKQKMFGD
CCCCCCCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]