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The map label for this gene is yqfA [H]

Identifier: 120609443

GI number: 120609443

Start: 800970

End: 801632

Strand: Reverse

Name: yqfA [H]

Synonym: Aave_0747

Alternate gene names: 120609443

Gene position: 801632-800970 (Counterclockwise)

Preceding gene: 120609444

Following gene: 120609437

Centisome position: 14.98

GC content: 65.16

Gene sequence:

>663_bases
ATGTCACGCCCGGCTGATCCACTGGCGCCAATTCACCGCTGCTCCATGGGAATGCGCCCCGGCGAACGCTTCAACACCTG
CACCCACCTGTTGGGGTTCGCGTTGGCTATCCCAGGCGTTCCCCTCATGCTCATCGTCAGCCTGCCCACCGGGGACGTGG
GCAAGATCGCTGGGGGGCTGGTTTTTTCGCTGTCCTGCGTTGCACTGTATGCGGCATCCACCTTTTTCCACAGCTCGCAT
GGGGCCGCGAAATTGTGGTGGCAGCGGGCGGACCACTGCGCCATCTACCTGCTCATTGCCGGCAGCTACACACCCTTCGC
ATTGGTCGCGGCGCGGGGTGCCTGGGACTGGGCCGTGCTGGTGGCGGTGTGGATCATCGCCTTGCTGGGCATCGCGCGCG
AACTTGGCGTCGTTTCTCCAGCACCACCCCTGTCACTCTACATGGGCATGGGCTGGGCCATGGTGGCCGCTGCCGTACCG
CTGCTGGCCCGGATCGACGCCATAGCGCTGCGGTGGCTGCTCGCCGGCGCAGTCTTCTACACGGTGGGCACGGTCTTCTA
CGTCAATCGCGCCGGCTATCGCCATGCGCATGGGGTCTGGCACCTGTTTGTCCTGGGTGGAACGGCGAGCCACTATGCAG
CGGTGGTCAGCGTCGTGGCCTGA

Upstream 100 bases:

>100_bases
GCGTGTCGGCATCGGCCTTGAAACGGCGCGTGGCATCGGTCCGGGCGCGCCAACCCTGTCTGGCGAATACCGCTTGGGCC
ATCCCCTTTTCTTCACGCCG

Downstream 100 bases:

>100_bases
CCGCGGGTCGCGGCGCAGGAAGCAGCCTGGGCCACCACGGGTTACGGCTCCCACGTCGCGCAGGTTTTTTTCACCTGCGG
GCTGATTTCTGAGCATAGGC

Product: Hly-III family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSRPADPLAPIHRCSMGMRPGERFNTCTHLLGFALAIPGVPLMLIVSLPTGDVGKIAGGLVFSLSCVALYAASTFFHSSH
GAAKLWWQRADHCAIYLLIAGSYTPFALVAARGAWDWAVLVAVWIIALLGIARELGVVSPAPPLSLYMGMGWAMVAAAVP
LLARIDAIALRWLLAGAVFYTVGTVFYVNRAGYRHAHGVWHLFVLGGTASHYAAVVSVVA

Sequences:

>Translated_220_residues
MSRPADPLAPIHRCSMGMRPGERFNTCTHLLGFALAIPGVPLMLIVSLPTGDVGKIAGGLVFSLSCVALYAASTFFHSSH
GAAKLWWQRADHCAIYLLIAGSYTPFALVAARGAWDWAVLVAVWIIALLGIARELGVVSPAPPLSLYMGMGWAMVAAAVP
LLARIDAIALRWLLAGAVFYTVGTVFYVNRAGYRHAHGVWHLFVLGGTASHYAAVVSVVA
>Mature_219_residues
SRPADPLAPIHRCSMGMRPGERFNTCTHLLGFALAIPGVPLMLIVSLPTGDVGKIAGGLVFSLSCVALYAASTFFHSSHG
AAKLWWQRADHCAIYLLIAGSYTPFALVAARGAWDWAVLVAVWIIALLGIARELGVVSPAPPLSLYMGMGWAMVAAAVPL
LARIDAIALRWLLAGAVFYTVGTVFYVNRAGYRHAHGVWHLFVLGGTASHYAAVVSVVA

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=199, Percent_Identity=36.1809045226131, Blast_Score=115, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71996356, Length=167, Percent_Identity=27.5449101796407, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23382; Mature: 23251

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPADPLAPIHRCSMGMRPGERFNTCTHLLGFALAIPGVPLMLIVSLPTGDVGKIAGGL
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
VFSLSCVALYAASTFFHSSHGAAKLWWQRADHCAIYLLIAGSYTPFALVAARGAWDWAVL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHEEECCCCHHHHH
VAVWIIALLGIARELGVVSPAPPLSLYMGMGWAMVAAAVPLLARIDAIALRWLLAGAVFY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGTVFYVNRAGYRHAHGVWHLFVLGGTASHYAAVVSVVA
HHHHHHEEECCCCCHHCCEEEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
SRPADPLAPIHRCSMGMRPGERFNTCTHLLGFALAIPGVPLMLIVSLPTGDVGKIAGGL
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
VFSLSCVALYAASTFFHSSHGAAKLWWQRADHCAIYLLIAGSYTPFALVAARGAWDWAVL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHEEECCCCHHHHH
VAVWIIALLGIARELGVVSPAPPLSLYMGMGWAMVAAAVPLLARIDAIALRWLLAGAVFY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGTVFYVNRAGYRHAHGVWHLFVLGGTASHYAAVVSVVA
HHHHHHEEECCCCCHHCCEEEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]