| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is icfA [H]
Identifier: 120609365
GI number: 120609365
Start: 724440
End: 725153
Strand: Direct
Name: icfA [H]
Synonym: Aave_0666
Alternate gene names: 120609365
Gene position: 724440-725153 (Clockwise)
Preceding gene: 120609364
Following gene: 120609366
Centisome position: 13.53
GC content: 70.73
Gene sequence:
>714_bases ATGCCCGACGAGCTGCTGCAGCGCCTGCGCCGTTTCCACGACGATGCGTTCCCGCGCTACCGCCAGCGCTTCCAGGACCT GGTGGCGCAGGGCCAGCGGCCCACCACGCTCTTCATCGGCTGCTCCGATTCGCGCCTGGTGCCGCACCTGCTCACCGGCA CGGGGCCGGGCGAACTCTTCCTGGTGCGCAACGTGGGCGCCTTCGTTCCGCCCTGCGACGGCTCGCACGGCCACCACGGC ACGGCCGCCGCGATCGAATTCGCGGTGCTCAGCCTGCAGGTGCGGCGCATCGTCGTCTGCGGGCACAGCCACTGCGGCGC GGTGAAGGCGCTCTACGGCGAGGTGCCGGCCGAAGCCCTCAACCTGCAGCGCTGGCTGGAGCTCGGCCGCGAAGCCGTGC TGCCCGTGCAGGCCACGCCCGAGGCGCTGCGGCGTACCGAACAGCGTGCCGTGGTGCTGCAGCTCGAACGCCTCATGGAC TACCCCATGGTGCGGCGCCGCGTGCAGGCGGGCGAACTCACGCTGCATGGCTGGCACTACGTGATCGAGGAAGGCGAGGT GCATGTCTTCGACCTGGAGCAGGCCGGTTTCGTGGCCGCATCCAGTGCCGACCACAGCGGCACCGGGCCCTATGCGCCCT ACGTCGAGCACGACGGGCAAGTCCTTTGCGCCGACGTTGACATAGCCCAGTGCGGCGCGCCGGCGCAGGAGTAG
Upstream 100 bases:
>100_bases TACCTGCAGGTGCTCGCGGGCGAAGCCGCGCTGCAGGGCGTGGACCTGGACGGCGCCGACACGCCGCTCGTGCAGTAGCG TTCCCGGGCTCCGCCACGCC
Downstream 100 bases:
>100_bases AAAGACGGCTTGGCCGTGTTCAGGAACTGGAACCCATGCAACGCGATCCGATCGACTCCCTCGCGCCCGACGCGGCGCCC CGCCTGCCCGAGCAGCCCAT
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MPDELLQRLRRFHDDAFPRYRQRFQDLVAQGQRPTTLFIGCSDSRLVPHLLTGTGPGELFLVRNVGAFVPPCDGSHGHHG TAAAIEFAVLSLQVRRIVVCGHSHCGAVKALYGEVPAEALNLQRWLELGREAVLPVQATPEALRRTEQRAVVLQLERLMD YPMVRRRVQAGELTLHGWHYVIEEGEVHVFDLEQAGFVAASSADHSGTGPYAPYVEHDGQVLCADVDIAQCGAPAQE
Sequences:
>Translated_237_residues MPDELLQRLRRFHDDAFPRYRQRFQDLVAQGQRPTTLFIGCSDSRLVPHLLTGTGPGELFLVRNVGAFVPPCDGSHGHHG TAAAIEFAVLSLQVRRIVVCGHSHCGAVKALYGEVPAEALNLQRWLELGREAVLPVQATPEALRRTEQRAVVLQLERLMD YPMVRRRVQAGELTLHGWHYVIEEGEVHVFDLEQAGFVAASSADHSGTGPYAPYVEHDGQVLCADVDIAQCGAPAQE >Mature_236_residues PDELLQRLRRFHDDAFPRYRQRFQDLVAQGQRPTTLFIGCSDSRLVPHLLTGTGPGELFLVRNVGAFVPPCDGSHGHHGT AAAIEFAVLSLQVRRIVVCGHSHCGAVKALYGEVPAEALNLQRWLELGREAVLPVQATPEALRRTEQRAVVLQLERLMDY PMVRRRVQAGELTLHGWHYVIEEGEVHVFDLEQAGFVAASSADHSGTGPYAPYVEHDGQVLCADVDIAQCGAPAQE
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786534, Length=205, Percent_Identity=38.5365853658537, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1786318, Length=176, Percent_Identity=32.9545454545455, Blast_Score=78, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115532990, Length=234, Percent_Identity=26.9230769230769, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25147564, Length=222, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324292, Length=175, Percent_Identity=32.5714285714286, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI24645213, Length=230, Percent_Identity=23.9130434782609, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 26159; Mature: 26028
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDELLQRLRRFHDDAFPRYRQRFQDLVAQGQRPTTLFIGCSDSRLVPHLLTGTGPGELF CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCEE LVRNVGAFVPPCDGSHGHHGTAAAIEFAVLSLQVRRIVVCGHSHCGAVKALYGEVPAEAL EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCHHHH NLQRWLELGREAVLPVQATPEALRRTEQRAVVLQLERLMDYPMVRRRVQAGELTLHGWHY HHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECEEE VIEEGEVHVFDLEQAGFVAASSADHSGTGPYAPYVEHDGQVLCADVDIAQCGAPAQE EEECCCEEEEEECCCCEEEECCCCCCCCCCCCCCEECCCCEEEEECCHHHCCCCCCC >Mature Secondary Structure PDELLQRLRRFHDDAFPRYRQRFQDLVAQGQRPTTLFIGCSDSRLVPHLLTGTGPGELF CHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCEE LVRNVGAFVPPCDGSHGHHGTAAAIEFAVLSLQVRRIVVCGHSHCGAVKALYGEVPAEAL EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCHHHH NLQRWLELGREAVLPVQATPEALRRTEQRAVVLQLERLMDYPMVRRRVQAGELTLHGWHY HHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECEEE VIEEGEVHVFDLEQAGFVAASSADHSGTGPYAPYVEHDGQVLCADVDIAQCGAPAQE EEECCCEEEEEECCCCEEEECCCCCCCCCCCCCCEECCCCEEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1584776 [H]