| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is surA [H]
Identifier: 120609364
GI number: 120609364
Start: 723506
End: 724417
Strand: Direct
Name: surA [H]
Synonym: Aave_0665
Alternate gene names: 120609364
Gene position: 723506-724417 (Clockwise)
Preceding gene: 120609363
Following gene: 120609365
Centisome position: 13.52
GC content: 75.44
Gene sequence:
>912_bases ATGTCCTGCACCTGCCAAGACTCTCCTGCCTCCACCGGCTGCCGCGGCTCCGGTTCCGGGGGCGATCTGGATCACGCCGT CGGCATCGCCCCCGGCTTCGATGCGGACCTTCCCGGGCACGGTCCCGGCTCGCCCGCGCCGGCCGTCCCGGGCCCCGTTG CCTCGGTCAACGGCGTCGCGCTGCACCGCGCGGATGATGCGCCCGATGCGGACACGCTGCGCCAGCGTGCCTGCACCGAG CTGCTGCGCCAGGCCGCCCAGCGCGCCGGCCTGTTGGCGGCCGATGACGCGCCCGCCGACGACGGCACCACCTCCGAAGC CGCGACGCAGGCCATCGAGGCACTGCTGGAGCAGGCCCTCGCCGTGCCCGACCCGTCGGAGGATGCCTGCCGCCGCCACT ACGAGGCGCACACCGCGCGCTACCGCGACGGCGAGCGCGTGCACCTGCGGCACGTCCTCTATGCCGTGACGCCGGGCGTG GACGTGCAGCGCCTGCGCGAACGCGCCGAAGCCGAACTGCTGCAACTGCGCTGCGCCCACGACGGAGGCGAGGCCTTCGC GCGTGCCGCACGGCAATGGTCCAACTGCCCTACCGGCGCGGAGGGTGGCGACCTGGGCTGGCTGGCGCGCGGCGACTGCG CGCCCGAGTTCGCGCGCGAGGTGTTCGGCGCGCAGGAGGTCGGCGTGCTGCCGCGCCTGGTGCACAGCCGCTTCGGCCTG CACGTGGTGGAGGTGGTGGCGCGCGACGCGGGCCGCCAGCGCGGCTACGGCGAGGTGCGCGAGGCCGTCGCGCTCGCGCT GCGCCAGCAGTCCTGGGTGAACGCGCTGCGGCAGTACCTGCAGGTGCTCGCGGGCGAAGCCGCGCTGCAGGGCGTGGACC TGGACGGCGCCGACACGCCGCTCGTGCAGTAG
Upstream 100 bases:
>100_bases ACCTGCCTGGCCAGCCCAGCGCCGTGCCGTCGCCCGACGTGGCCCGCGCCATCGACAACCCGCGCGCCACGCGCTAGCGG CCTTCGCACCGGAGCACACC
Downstream 100 bases:
>100_bases CGTTCCCGGGCTCCGCCACGCCATGCCCGACGAGCTGCTGCAGCGCCTGCGCCGTTTCCACGACGATGCGTTCCCGCGCT ACCGCCAGCGCTTCCAGGAC
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSCTCQDSPASTGCRGSGSGGDLDHAVGIAPGFDADLPGHGPGSPAPAVPGPVASVNGVALHRADDAPDADTLRQRACTE LLRQAAQRAGLLAADDAPADDGTTSEAATQAIEALLEQALAVPDPSEDACRRHYEAHTARYRDGERVHLRHVLYAVTPGV DVQRLRERAEAELLQLRCAHDGGEAFARAARQWSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEVGVLPRLVHSRFGL HVVEVVARDAGRQRGYGEVREAVALALRQQSWVNALRQYLQVLAGEAALQGVDLDGADTPLVQ
Sequences:
>Translated_303_residues MSCTCQDSPASTGCRGSGSGGDLDHAVGIAPGFDADLPGHGPGSPAPAVPGPVASVNGVALHRADDAPDADTLRQRACTE LLRQAAQRAGLLAADDAPADDGTTSEAATQAIEALLEQALAVPDPSEDACRRHYEAHTARYRDGERVHLRHVLYAVTPGV DVQRLRERAEAELLQLRCAHDGGEAFARAARQWSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEVGVLPRLVHSRFGL HVVEVVARDAGRQRGYGEVREAVALALRQQSWVNALRQYLQVLAGEAALQGVDLDGADTPLVQ >Mature_302_residues SCTCQDSPASTGCRGSGSGGDLDHAVGIAPGFDADLPGHGPGSPAPAVPGPVASVNGVALHRADDAPDADTLRQRACTEL LRQAAQRAGLLAADDAPADDGTTSEAATQAIEALLEQALAVPDPSEDACRRHYEAHTARYRDGERVHLRHVLYAVTPGVD VQRLRERAEAELLQLRCAHDGGEAFARAARQWSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEVGVLPRLVHSRFGLH VVEVVARDAGRQRGYGEVREAVALALRQQSWVNALRQYLQVLAGEAALQGVDLDGADTPLVQ
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 31924; Mature: 31792
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCTCQDSPASTGCRGSGSGGDLDHAVGIAPGFDADLPGHGPGSPAPAVPGPVASVNGVA CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LHRADDAPDADTLRQRACTELLRQAAQRAGLLAADDAPADDGTTSEAATQAIEALLEQAL EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH AVPDPSEDACRRHYEAHTARYRDGERVHLRHVLYAVTPGVDVQRLRERAEAELLQLRCAH CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC DGGEAFARAARQWSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEVGVLPRLVHSRFGL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH HVVEVVARDAGRQRGYGEVREAVALALRQQSWVNALRQYLQVLAGEAALQGVDLDGADTP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LVQ CCC >Mature Secondary Structure SCTCQDSPASTGCRGSGSGGDLDHAVGIAPGFDADLPGHGPGSPAPAVPGPVASVNGVA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LHRADDAPDADTLRQRACTELLRQAAQRAGLLAADDAPADDGTTSEAATQAIEALLEQAL EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH AVPDPSEDACRRHYEAHTARYRDGERVHLRHVLYAVTPGVDVQRLRERAEAELLQLRCAH CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC DGGEAFARAARQWSNCPTGAEGGDLGWLARGDCAPEFAREVFGAQEVGVLPRLVHSRFGL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH HVVEVVARDAGRQRGYGEVREAVALALRQQSWVNALRQYLQVLAGEAALQGVDLDGADTP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LVQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA