| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is narK [H]
Identifier: 120609359
GI number: 120609359
Start: 714905
End: 716368
Strand: Direct
Name: narK [H]
Synonym: Aave_0660
Alternate gene names: 120609359
Gene position: 714905-716368 (Clockwise)
Preceding gene: 120609358
Following gene: 120609360
Centisome position: 13.36
GC content: 69.54
Gene sequence:
>1464_bases ATGCCTGCCACCCCTTCTTCCTCTTCTTCCTCTCCCTCCCGCGGCGGTGCCCGGGCCGGGCGCGTGCTGACCCTGTGGAC CCCGGAGGACAAGGAGTTCTGGGAACGCGAAGGCGAAGCCATCGCGCGCCTGAACCTGTGGATCTCGGTGCCCGCGCTGT TCCTGTCCTTCGCCATCTGGCAGGTCTGGAGCGTGGTCGCCGTGAGCCTGCCGGCGCTGGGCTTCCGCTATTCCACCAAC CAGCTCTTCTGGCTGGCGGCGGCGCCCGCGCTCTCGGGTGCCACGCTGCGCATCTTCTACTCGTTCATGGTGCCCCTGGT GGGCGGGCGCCGCTGGACGGCGATCTCCACCGCGTCGCTGCTGGTCCCGGCCCTCGGCATCGGCTTCGCGGTGCAGGACA GCACGACGGCCTACCCGACGATGCTGGCGCTCGCGCTGCTGTGCGGCCTGGGCGGCGGCAATTTCAGCTCCAGCATGGCC AACATCAGCTTCTTCTTCCCGAAGGAGCGCAAGGGTTCGGCGCTGGGCGTGAACGCGGGGCTGGGCAACCTGGGCGTGTC GGTGGTGCAGTTCCTGAGCCCGCTGGTGATCACGGCCGGCGTGTTCGGCGTGCTGGGCGGCGATGCGCAGACGATGGTGA AGAACGGCCAGGCGCAGCAGGTGTGGGCGCAGAACGCGGCCTTCGTCTGGGTGCCCTGGATCGCGCTCGCGTCGCTGGCC GCATGGTTCGGCATGAACGACATCGCCGACGCGCGCGCCTCGTTCGCGGCCCAGGCCGCCATCTTCCGCCGCAAGCACAA CTGGATCATGTGCGTGCTGTACCTGGGCACCTTCGGCTCGTTCATCGGCTTTTCCGCGGGCTTTCCGCTGCTCATCAAGA GCCAGTTCCCCGAGGTGAATCCGCTCGCCTACGCATGGCTCGGGCCGCTGGTGGGCGCGCTGATCCGGCCCGTGGGCGGA TGGCTGTCGGACAAGCTGGGCGGCGCGCGGGTCACGCTGTGGAACTTCGTGGCGATGGCCCTGGCCGTGCTGGGCGTGCT GGCCTTCCTGCCCAAGGGCACGGGTGGCTACGCGCTCGCCTTCGGGCCGGCGCAGGGCAGCTTCGCGGGCTTCTTCGCGA TGTTCATGGTGCTGTTCCTGACGACCGGCATCGGCAACGGATCGACCTTCCGGATGATCCCCGTGATCTTCCTGAACCTG CGCCTGGCCGAAGTACGCACGGGCGGCGCCGGGGCCCGCGCCCAGGCCACCCGCGAGGGCAACACCGAAGGCGCCGCGGC CCTGGGCTTCGCGGGCGCGCTGGGCGCCTACGGCGGCTTCTTCATCCCCAAGAGCTACGGCAGCTCCATCGCCGCGACGG GGGGGCCGGAACTGGCGCTGTGGGCGTTCGCCGCGTTCTACGCGCTCTGCATCGGCATCACCTGGTGGTACTACGCGCGC CGCCATGCAGAGATGCCGTGTTGA
Upstream 100 bases:
>100_bases CTGGCCTGGATGTATTTCACCGAGGTGCGCCGCACCGACGTGATGGACGCCGGCCGCGGCGCGGCGGACCGTTGAATCCC CAATGCAAGGAGACCGTGAC
Downstream 100 bases:
>100_bases TGACCTACCCCCTGTGCGGCTGCGCCGCTTCCCCCTTCTCTCACGCTGCGCGTGGGAAGGGGGACCACACCGGTGGCCCG GCCAAGCCGGTTCCACGGTG
Product: nitrite transporter
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MPATPSSSSSSPSRGGARAGRVLTLWTPEDKEFWEREGEAIARLNLWISVPALFLSFAIWQVWSVVAVSLPALGFRYSTN QLFWLAAAPALSGATLRIFYSFMVPLVGGRRWTAISTASLLVPALGIGFAVQDSTTAYPTMLALALLCGLGGGNFSSSMA NISFFFPKERKGSALGVNAGLGNLGVSVVQFLSPLVITAGVFGVLGGDAQTMVKNGQAQQVWAQNAAFVWVPWIALASLA AWFGMNDIADARASFAAQAAIFRRKHNWIMCVLYLGTFGSFIGFSAGFPLLIKSQFPEVNPLAYAWLGPLVGALIRPVGG WLSDKLGGARVTLWNFVAMALAVLGVLAFLPKGTGGYALAFGPAQGSFAGFFAMFMVLFLTTGIGNGSTFRMIPVIFLNL RLAEVRTGGAGARAQATREGNTEGAAALGFAGALGAYGGFFIPKSYGSSIAATGGPELALWAFAAFYALCIGITWWYYAR RHAEMPC
Sequences:
>Translated_487_residues MPATPSSSSSSPSRGGARAGRVLTLWTPEDKEFWEREGEAIARLNLWISVPALFLSFAIWQVWSVVAVSLPALGFRYSTN QLFWLAAAPALSGATLRIFYSFMVPLVGGRRWTAISTASLLVPALGIGFAVQDSTTAYPTMLALALLCGLGGGNFSSSMA NISFFFPKERKGSALGVNAGLGNLGVSVVQFLSPLVITAGVFGVLGGDAQTMVKNGQAQQVWAQNAAFVWVPWIALASLA AWFGMNDIADARASFAAQAAIFRRKHNWIMCVLYLGTFGSFIGFSAGFPLLIKSQFPEVNPLAYAWLGPLVGALIRPVGG WLSDKLGGARVTLWNFVAMALAVLGVLAFLPKGTGGYALAFGPAQGSFAGFFAMFMVLFLTTGIGNGSTFRMIPVIFLNL RLAEVRTGGAGARAQATREGNTEGAAALGFAGALGAYGGFFIPKSYGSSIAATGGPELALWAFAAFYALCIGITWWYYAR RHAEMPC >Mature_486_residues PATPSSSSSSPSRGGARAGRVLTLWTPEDKEFWEREGEAIARLNLWISVPALFLSFAIWQVWSVVAVSLPALGFRYSTNQ LFWLAAAPALSGATLRIFYSFMVPLVGGRRWTAISTASLLVPALGIGFAVQDSTTAYPTMLALALLCGLGGGNFSSSMAN ISFFFPKERKGSALGVNAGLGNLGVSVVQFLSPLVITAGVFGVLGGDAQTMVKNGQAQQVWAQNAAFVWVPWIALASLAA WFGMNDIADARASFAAQAAIFRRKHNWIMCVLYLGTFGSFIGFSAGFPLLIKSQFPEVNPLAYAWLGPLVGALIRPVGGW LSDKLGGARVTLWNFVAMALAVLGVLAFLPKGTGGYALAFGPAQGSFAGFFAMFMVLFLTTGIGNGSTFRMIPVIFLNLR LAEVRTGGAGARAQATREGNTEGAAALGFAGALGAYGGFFIPKSYGSSIAATGGPELALWAFAAFYALCIGITWWYYARR HAEMPC
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=478, Percent_Identity=52.510460251046, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1787743, Length=461, Percent_Identity=51.8438177874187, Blast_Score=412, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51512; Mature: 51381
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATPSSSSSSPSRGGARAGRVLTLWTPEDKEFWEREGEAIARLNLWISVPALFLSFAIW CCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH QVWSVVAVSLPALGFRYSTNQLFWLAAAPALSGATLRIFYSFMVPLVGGRRWTAISTASL HHHHHHHHHHHHCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHH LVPALGIGFAVQDSTTAYPTMLALALLCGLGGGNFSSSMANISFFFPKERKGSALGVNAG HHHHHCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEECCC LGNLGVSVVQFLSPLVITAGVFGVLGGDAQTMVKNGQAQQVWAQNAAFVWVPWIALASLA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHH AWFGMNDIADARASFAAQAAIFRRKHNWIMCVLYLGTFGSFIGFSAGFPLLIKSQFPEVN HHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCC PLAYAWLGPLVGALIRPVGGWLSDKLGGARVTLWNFVAMALAVLGVLAFLPKGTGGYALA CHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEE FGPAQGSFAGFFAMFMVLFLTTGIGNGSTFRMIPVIFLNLRLAEVRTGGAGARAQATREG ECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC NTEGAAALGFAGALGAYGGFFIPKSYGSSIAATGGPELALWAFAAFYALCIGITWWYYAR CCCCCHHHHHHHHHHHCCCEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RHAEMPC HHCCCCC >Mature Secondary Structure PATPSSSSSSPSRGGARAGRVLTLWTPEDKEFWEREGEAIARLNLWISVPALFLSFAIW CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH QVWSVVAVSLPALGFRYSTNQLFWLAAAPALSGATLRIFYSFMVPLVGGRRWTAISTASL HHHHHHHHHHHHCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHH LVPALGIGFAVQDSTTAYPTMLALALLCGLGGGNFSSSMANISFFFPKERKGSALGVNAG HHHHHCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEECCC LGNLGVSVVQFLSPLVITAGVFGVLGGDAQTMVKNGQAQQVWAQNAAFVWVPWIALASLA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHH AWFGMNDIADARASFAAQAAIFRRKHNWIMCVLYLGTFGSFIGFSAGFPLLIKSQFPEVN HHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCC PLAYAWLGPLVGALIRPVGGWLSDKLGGARVTLWNFVAMALAVLGVLAFLPKGTGGYALA CHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEE FGPAQGSFAGFFAMFMVLFLTTGIGNGSTFRMIPVIFLNLRLAEVRTGGAGARAQATREG ECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC NTEGAAALGFAGALGAYGGFFIPKSYGSSIAATGGPELALWAFAAFYALCIGITWWYYAR CCCCCHHHHHHHHHHHCCCEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RHAEMPC HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]