| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609352
Identifier: 120609352
GI number: 120609352
Start: 704397
End: 705221
Strand: Reverse
Name: 120609352
Synonym: Aave_0652
Alternate gene names: NA
Gene position: 705221-704397 (Counterclockwise)
Preceding gene: 120609354
Following gene: 120609348
Centisome position: 13.17
GC content: 77.7
Gene sequence:
>825_bases ATGCAACTGCCCATCCGCTTGCGGCGCTCCGCGGGGCGCGCCGCCTCCCTGGCCCTGCTGGTCCTGGCCGCGGCATGCGC CAGCCCCGCCCCGACCTCCCCGCCTGCCGGCGGCGACCCCTGGCAGGCGCTGCTGCCCGCCGAGATCCTGCTGCTGGGCG AGCAGCACGACGCACCGGACCACCAGCGGCTGGAACGCGAGGCCGTCGCCTCGCTGGCAGGCCGCGGGCAACTGGCGGCG CTGGTGATGGAGATGGCCGAGGCCGGCCACGGCACGGCCGGCCTGCCGCGCGATGCCTCCGAATCCGCCGTGCGCGCAGC GCTCGCATGGAACGACGCGGCCTGGCCCTGGACGCGCTACGGTCCGGTGGCGATGGAGGCCGTGCGTGCCGGCGTGCCGG TGCTCGGCGGCAACCTCCCCCGTGCGCGGATGCGCGAGGCCATGCAGGACGCCGCCTGGGACGCCCGCGTGCCCGCCCCC GTCCTGCGCCGGCAGGTCGAGGCCATGGAGGCCGGCCACTGCGGCCTGCTGCCCGCGTCGCAACTGCCCGGCATGGCCCG CATCCAGATCGCGCGCGACGACAGCCTCGCCCGGACGGCCGCCAGCGCGCGACGGCCGGGGCAGACGGTACTGCTGGTCA CGGGCGCGGGCCACGCCCGCCGCGACCTCGGCGTGCCGCTGCACTGGGACGCGGGCGTGCAGGCCCGCGTCGCGATCGCG CGCCCGGAATCCGCCACCGATCCGCTGCCCGGAGGCGCCGCCGACACGGTCCTGCCCACTCCACCCCTGCCACCCACCGA CCATTGCGCCGCGCTCCGGCGATAA
Upstream 100 bases:
>100_bases GCATGGCCGGCAGTGTAGGAACGGGCAACACCGTGGCCCTTGATACAAGTCAAGCCAGAGCCTTCGAGGCCGCCCGCCTC GATGGGTTAAGGTGCCGGCC
Downstream 100 bases:
>100_bases AGCGACGGGGCGCCGGGCCACGGCCCGCCCGCGGACCTACTCCTCCGACCCGGCGTTCCAGAACGCCTGCAGCACGCCCG GCAGTTCCTCGATCGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MQLPIRLRRSAGRAASLALLVLAAACASPAPTSPPAGGDPWQALLPAEILLLGEQHDAPDHQRLEREAVASLAGRGQLAA LVMEMAEAGHGTAGLPRDASESAVRAALAWNDAAWPWTRYGPVAMEAVRAGVPVLGGNLPRARMREAMQDAAWDARVPAP VLRRQVEAMEAGHCGLLPASQLPGMARIQIARDDSLARTAASARRPGQTVLLVTGAGHARRDLGVPLHWDAGVQARVAIA RPESATDPLPGGAADTVLPTPPLPPTDHCAALRR
Sequences:
>Translated_274_residues MQLPIRLRRSAGRAASLALLVLAAACASPAPTSPPAGGDPWQALLPAEILLLGEQHDAPDHQRLEREAVASLAGRGQLAA LVMEMAEAGHGTAGLPRDASESAVRAALAWNDAAWPWTRYGPVAMEAVRAGVPVLGGNLPRARMREAMQDAAWDARVPAP VLRRQVEAMEAGHCGLLPASQLPGMARIQIARDDSLARTAASARRPGQTVLLVTGAGHARRDLGVPLHWDAGVQARVAIA RPESATDPLPGGAADTVLPTPPLPPTDHCAALRR >Mature_274_residues MQLPIRLRRSAGRAASLALLVLAAACASPAPTSPPAGGDPWQALLPAEILLLGEQHDAPDHQRLEREAVASLAGRGQLAA LVMEMAEAGHGTAGLPRDASESAVRAALAWNDAAWPWTRYGPVAMEAVRAGVPVLGGNLPRARMREAMQDAAWDARVPAP VLRRQVEAMEAGHCGLLPASQLPGMARIQIARDDSLARTAASARRPGQTVLLVTGAGHARRDLGVPLHWDAGVQARVAIA RPESATDPLPGGAADTVLPTPPLPPTDHCAALRR
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28616; Mature: 28616
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPIRLRRSAGRAASLALLVLAAACASPAPTSPPAGGDPWQALLPAEILLLGEQHDAPD CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHEEECCCCCCCH HQRLEREAVASLAGRGQLAALVMEMAEAGHGTAGLPRDASESAVRAALAWNDAAWPWTRY HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GPVAMEAVRAGVPVLGGNLPRARMREAMQDAAWDARVPAPVLRRQVEAMEAGHCGLLPAS CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHH QLPGMARIQIARDDSLARTAASARRPGQTVLLVTGAGHARRDLGVPLHWDAGVQARVAIA HCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCEEECCCCEEEEEEE RPESATDPLPGGAADTVLPTPPLPPTDHCAALRR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MQLPIRLRRSAGRAASLALLVLAAACASPAPTSPPAGGDPWQALLPAEILLLGEQHDAPD CCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHEEECCCCCCCH HQRLEREAVASLAGRGQLAALVMEMAEAGHGTAGLPRDASESAVRAALAWNDAAWPWTRY HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC GPVAMEAVRAGVPVLGGNLPRARMREAMQDAAWDARVPAPVLRRQVEAMEAGHCGLLPAS CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHH QLPGMARIQIARDDSLARTAASARRPGQTVLLVTGAGHARRDLGVPLHWDAGVQARVAIA HCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCEEECCCCEEEEEEE RPESATDPLPGGAADTVLPTPPLPPTDHCAALRR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA