| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609282
Identifier: 120609282
GI number: 120609282
Start: 634205
End: 635719
Strand: Reverse
Name: 120609282
Synonym: Aave_0582
Alternate gene names: NA
Gene position: 635719-634205 (Counterclockwise)
Preceding gene: 120609290
Following gene: 120609278
Centisome position: 11.88
GC content: 65.15
Gene sequence:
>1515_bases ATGACGCTCTACACGACCGACTACCTGGAGTACTACCTCACGCTCGTTGGCTGGATCGTCCAGAACGGCATCTGGAACAT CCTCGTCGCGAGCGGAGCGTTCGCCCTGCCCTTCGTCGCGATCGTTGTCCAGGAGTGGCTCCGCGCCCGGGGCGAAGGTG CCGACGAGGGCAACAAAGGTGTGCTGTCGGCCGCCCGGATCGAAAACCGCGTGTGGGTGGCTGTGGTGGTCATCCTGTTC GCCGGCATCCCCTTCATCGATGTGGATCTCTCCACGATCCAGTTCGACACCAGCCGCTCCAAGCAGTGCAAGGTCGATGT GGCCGTCCCCCAGGACACGCGCTGGGCGAATGCGTTCACGACGCTCAACAACCAGAGCGCACGCGTGCCGGTGTGGTGGT TCTTCATGCACGCGATTTCCAAGGCCGTGACCGGGGCCGCCGTCGTCGCCATTCCCTGTGGGACGGACCTACGGCAGATG CGGATGGAGATCGACAGCGCGCGCATCAACGATCCCGTGCTGGCACAGGAGGTGGCCGATTTCACGCGGGACTGCTACGG GCCCGCGCGGGCCAAGCTCTTCATGGGCCGCCCCGAGCTCTCGGACGCCCAGATGAACGACGTGACCTGGATCGGCTCCG CCTACTTTCTTGGAACAGGCGGGTACTACGACATCTACCACTCGCAGACACCCCGCACATCCTGGCCCTACGACGCCACG CGCGACGCGGGGCTGGCACAGGTCGCGAATGGGGGCGGCTACCCTACCTGCAGGCAATGGTGGAACGACGGCGACCGCGG CCTGCGCAGCCGGCTGCTGGCCCAGGTGGATTCCGGTCTCCTGGCCCGTGTCGGGCGCTGGGCGAGCTTCGTGTCGCGCC AACAGGCGGACGATGCCGTCATCCGGGCCATCGCGGCGCCGCGCCAGCAGACCATGAACCAGGGCCAGGCCTACGCCGAC TATGGCGGGCAGGTCGACATGACGTTGCCCAACATCGTCACGCGGGGAGCGGCCGACGCGGGCCTGGCAGTCGGCTCGGT CGGCTTCTTCCCGGCCATGGACGTGGTGCGCCAAGCCCTACCGATGGTGCTGTCGTTCCTCAAGATGGCGCTGGTCATCT GTGTGCCGCTCGTGCTGCTGTTCGGCACGTACGACCTCAAGGCCGTGGTGACCATGAGCTGTGTGCAGTTCGCCCTCTTC TTCGTGGACTTCTGGTTCCAGTTGGCCCGCTGGATCGACAGCACGATCCTCGACGCACTGTATGGATGGAGTGGTCCGCA CAGCAACCTCGACCCACTTCTCGGGCTGAACAATGCGTTCGGAGACATGCTGCTGAACTTCGTGATGGCGAGCATGTTTC TCATACTGCCGGGCGTATGGGTTGCCGCGCTTGGATGGGTGGGGGTGCAGGCGGGAACGATGGCGCGCATGCTCGCCACA GGCACGGACGGCGCAAGATCGGCTGGAAGTAAGGGAAGCGACGCGGCACTCAATGCCGCGCTGAGATCCAAGTGA
Upstream 100 bases:
>100_bases CTCTCCAATGCGGAACGGCGCCGACGCTCATTGCCTGCAGCCAGCATCGCCTCGCGACTCCCATCATCCCCAACACGCTA TGCATGATGTTGAGGCCCGC
Downstream 100 bases:
>100_bases CCGCTGCGATCGCTTAGCTGTCTTCCTGCTCGCCCGGGTCGATCCGCATATCGCCCCTGTAGAGCCCGTAACCCTCCCAC CCGTCCTTCCACTCCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTLYTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVVQEWLRARGEGADEGNKGVLSAARIENRVWVAVVVILF AGIPFIDVDLSTIQFDTSRSKQCKVDVAVPQDTRWANAFTTLNNQSARVPVWWFFMHAISKAVTGAAVVAIPCGTDLRQM RMEIDSARINDPVLAQEVADFTRDCYGPARAKLFMGRPELSDAQMNDVTWIGSAYFLGTGGYYDIYHSQTPRTSWPYDAT RDAGLAQVANGGGYPTCRQWWNDGDRGLRSRLLAQVDSGLLARVGRWASFVSRQQADDAVIRAIAAPRQQTMNQGQAYAD YGGQVDMTLPNIVTRGAADAGLAVGSVGFFPAMDVVRQALPMVLSFLKMALVICVPLVLLFGTYDLKAVVTMSCVQFALF FVDFWFQLARWIDSTILDALYGWSGPHSNLDPLLGLNNAFGDMLLNFVMASMFLILPGVWVAALGWVGVQAGTMARMLAT GTDGARSAGSKGSDAALNAALRSK
Sequences:
>Translated_504_residues MTLYTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVVQEWLRARGEGADEGNKGVLSAARIENRVWVAVVVILF AGIPFIDVDLSTIQFDTSRSKQCKVDVAVPQDTRWANAFTTLNNQSARVPVWWFFMHAISKAVTGAAVVAIPCGTDLRQM RMEIDSARINDPVLAQEVADFTRDCYGPARAKLFMGRPELSDAQMNDVTWIGSAYFLGTGGYYDIYHSQTPRTSWPYDAT RDAGLAQVANGGGYPTCRQWWNDGDRGLRSRLLAQVDSGLLARVGRWASFVSRQQADDAVIRAIAAPRQQTMNQGQAYAD YGGQVDMTLPNIVTRGAADAGLAVGSVGFFPAMDVVRQALPMVLSFLKMALVICVPLVLLFGTYDLKAVVTMSCVQFALF FVDFWFQLARWIDSTILDALYGWSGPHSNLDPLLGLNNAFGDMLLNFVMASMFLILPGVWVAALGWVGVQAGTMARMLAT GTDGARSAGSKGSDAALNAALRSK >Mature_503_residues TLYTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVVQEWLRARGEGADEGNKGVLSAARIENRVWVAVVVILFA GIPFIDVDLSTIQFDTSRSKQCKVDVAVPQDTRWANAFTTLNNQSARVPVWWFFMHAISKAVTGAAVVAIPCGTDLRQMR MEIDSARINDPVLAQEVADFTRDCYGPARAKLFMGRPELSDAQMNDVTWIGSAYFLGTGGYYDIYHSQTPRTSWPYDATR DAGLAQVANGGGYPTCRQWWNDGDRGLRSRLLAQVDSGLLARVGRWASFVSRQQADDAVIRAIAAPRQQTMNQGQAYADY GGQVDMTLPNIVTRGAADAGLAVGSVGFFPAMDVVRQALPMVLSFLKMALVICVPLVLLFGTYDLKAVVTMSCVQFALFF VDFWFQLARWIDSTILDALYGWSGPHSNLDPLLGLNNAFGDMLLNFVMASMFLILPGVWVAALGWVGVQAGTMARMLATG TDGARSAGSKGSDAALNAALRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55004; Mature: 54873
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLYTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVVQEWLRARGEGADEGNKG CCEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC VLSAARIENRVWVAVVVILFAGIPFIDVDLSTIQFDTSRSKQCKVDVAVPQDTRWANAFT CCHHHHHCCHHHHHHHHHHHCCCCEEECCHHEEEECCCCCCCEEEEEECCCCCCHHHHHH TLNNQSARVPVWWFFMHAISKAVTGAAVVAIPCGTDLRQMRMEIDSARINDPVLAQEVAD HCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH FTRDCYGPARAKLFMGRPELSDAQMNDVTWIGSAYFLGTGGYYDIYHSQTPRTSWPYDAT HHHHHCCHHHHHEEECCCCCCCCCCCCEEEECCEEEEECCCEEEEECCCCCCCCCCCCCC RDAGLAQVANGGGYPTCRQWWNDGDRGLRSRLLAQVDSGLLARVGRWASFVSRQQADDAV CCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRAIAAPRQQTMNQGQAYADYGGQVDMTLPNIVTRGAADAGLAVGSVGFFPAMDVVRQAL HHHHHHHHHHHHHCCCEECCCCCEEEEEHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHH PMVLSFLKMALVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDAL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGWSGPHSNLDPLLGLNNAFGDMLLNFVMASMFLILPGVWVAALGWVGVQAGTMARMLAT HCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTDGARSAGSKGSDAALNAALRSK CCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TLYTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVVQEWLRARGEGADEGNKG CEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC VLSAARIENRVWVAVVVILFAGIPFIDVDLSTIQFDTSRSKQCKVDVAVPQDTRWANAFT CCHHHHHCCHHHHHHHHHHHCCCCEEECCHHEEEECCCCCCCEEEEEECCCCCCHHHHHH TLNNQSARVPVWWFFMHAISKAVTGAAVVAIPCGTDLRQMRMEIDSARINDPVLAQEVAD HCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH FTRDCYGPARAKLFMGRPELSDAQMNDVTWIGSAYFLGTGGYYDIYHSQTPRTSWPYDAT HHHHHCCHHHHHEEECCCCCCCCCCCCEEEECCEEEEECCCEEEEECCCCCCCCCCCCCC RDAGLAQVANGGGYPTCRQWWNDGDRGLRSRLLAQVDSGLLARVGRWASFVSRQQADDAV CCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRAIAAPRQQTMNQGQAYADYGGQVDMTLPNIVTRGAADAGLAVGSVGFFPAMDVVRQAL HHHHHHHHHHHHHCCCEECCCCCEEEEEHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHH PMVLSFLKMALVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDAL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGWSGPHSNLDPLLGLNNAFGDMLLNFVMASMFLILPGVWVAALGWVGVQAGTMARMLAT HCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTDGARSAGSKGSDAALNAALRSK CCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA