Click here to switch to the map view.

The map label for this gene is 120609167

Identifier: 120609167

GI number: 120609167

Start: 502801

End: 503634

Strand: Reverse

Name: 120609167

Synonym: Aave_0464

Alternate gene names: NA

Gene position: 503634-502801 (Counterclockwise)

Preceding gene: 120609168

Following gene: 120609166

Centisome position: 9.41

GC content: 73.26

Gene sequence:

>834_bases
ATGCTGATCTGGTCTTCTCCCGGAGGCGCCGGCCTGCATTCGCCGGCCGGCATCCTCCGGGCCGCTGAATTCGAAACCGC
CACCACGGCCGTGGCCGTGCTGGAAGGGGCACGCACCGAGGGCGACCACCTCCTCGCCCAGGCAAGGCAGGAGGCCGCCG
ACCTGCTGGAGGCCGCGGCCAGGCAGGCGCAGGCGCTGCGCGACCAGGCCGCGGCCGATGCCGCAGCCCTGGTCGATCAG
GCCCGTGCCGATGCCCGGCTCCTCGCGGAGCAGGCCGTGGCCGACGCCTCCGAGGACGCCGCCCGCCGCTGGCACGCGGA
ATTCGCCGCGCTGCAGGCATCGCACGATGCCGCCATGGCGGGCATGGAAAAGCGCCTGGCGGCCGTTGTCGCGATGGCGG
TGGAACGCATGGTGCTGGCAGAGCCGAGGCAGGCCCTGCTGCAACGCGCGGTCCTGACCCTGCGCGACACCCTGGGCGAC
GCCCGCACCGCGCGCCTGCGTGTCCATCCTGACGATGCGGACGCGGCACGCGCCGCGCTTTCGGCCATCGGCAGCGACCC
CGACGCCCCGCGCGTCCAGGTGGAGGCCGATGCCGACCTACCGCCCGGCAGCAGCATTTTCGATGCCGACATCGGCCGCC
TGGACACCAGCCTGCAGGTGCAGCTGGCGGGCCTGCGCGGCGCGCTGGAGCGCGCCGTCCGCGTGGCCGCCGAGGAGCCG
GTCACCGTGGCCTATGCGAGCCGGCTGGGCGAGGACGATGGCCACGACAACGACGAATACCAGGACGATGGACAGGACGA
CGATCGCCTGCCCCGGGAGGATGACGATGCATGA

Upstream 100 bases:

>100_bases
CGCGCTCCGGCGCCCCCCGCCCCCACCTGGTGCCCCGTGCATCGGCCGCGGCGCGGGAGCGCCTGCAGGCGCTGGAAACC
CTTTTCCCGGAGGGCCGCAC

Downstream 100 bases:

>100_bases
CGTGAACGGAACCGCGCGGATTGCCCGCTGGATGGAGCGCGAGATCGCCGCCGCCCCGCTGGTGCGCCGCAGCGGCAAGG
TGGCCGAGGTGATCGGCACG

Product: HrpE/YscL family type III secretion apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLIWSSPGGAGLHSPAGILRAAEFETATTAVAVLEGARTEGDHLLAQARQEAADLLEAAARQAQALRDQAAADAAALVDQ
ARADARLLAEQAVADASEDAARRWHAEFAALQASHDAAMAGMEKRLAAVVAMAVERMVLAEPRQALLQRAVLTLRDTLGD
ARTARLRVHPDDADAARAALSAIGSDPDAPRVQVEADADLPPGSSIFDADIGRLDTSLQVQLAGLRGALERAVRVAAEEP
VTVAYASRLGEDDGHDNDEYQDDGQDDDRLPREDDDA

Sequences:

>Translated_277_residues
MLIWSSPGGAGLHSPAGILRAAEFETATTAVAVLEGARTEGDHLLAQARQEAADLLEAAARQAQALRDQAAADAAALVDQ
ARADARLLAEQAVADASEDAARRWHAEFAALQASHDAAMAGMEKRLAAVVAMAVERMVLAEPRQALLQRAVLTLRDTLGD
ARTARLRVHPDDADAARAALSAIGSDPDAPRVQVEADADLPPGSSIFDADIGRLDTSLQVQLAGLRGALERAVRVAAEEP
VTVAYASRLGEDDGHDNDEYQDDGQDDDRLPREDDDA
>Mature_277_residues
MLIWSSPGGAGLHSPAGILRAAEFETATTAVAVLEGARTEGDHLLAQARQEAADLLEAAARQAQALRDQAAADAAALVDQ
ARADARLLAEQAVADASEDAARRWHAEFAALQASHDAAMAGMEKRLAAVVAMAVERMVLAEPRQALLQRAVLTLRDTLGD
ARTARLRVHPDDADAARAALSAIGSDPDAPRVQVEADADLPPGSSIFDADIGRLDTSLQVQLAGLRGALERAVRVAAEEP
VTVAYASRLGEDDGHDNDEYQDDGQDDDRLPREDDDA

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29202; Mature: 29202

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIWSSPGGAGLHSPAGILRAAEFETATTAVAVLEGARTEGDHLLAQARQEAADLLEAAA
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RQAQALRDQAAADAAALVDQARADARLLAEQAVADASEDAARRWHAEFAALQASHDAAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GMEKRLAAVVAMAVERMVLAEPRQALLQRAVLTLRDTLGDARTARLRVHPDDADAARAAL
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
SAIGSDPDAPRVQVEADADLPPGSSIFDADIGRLDTSLQVQLAGLRGALERAVRVAAEEP
HHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHCCC
VTVAYASRLGEDDGHDNDEYQDDGQDDDRLPREDDDA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLIWSSPGGAGLHSPAGILRAAEFETATTAVAVLEGARTEGDHLLAQARQEAADLLEAAA
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RQAQALRDQAAADAAALVDQARADARLLAEQAVADASEDAARRWHAEFAALQASHDAAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GMEKRLAAVVAMAVERMVLAEPRQALLQRAVLTLRDTLGDARTARLRVHPDDADAARAAL
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
SAIGSDPDAPRVQVEADADLPPGSSIFDADIGRLDTSLQVQLAGLRGALERAVRVAAEEP
HHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHCCC
VTVAYASRLGEDDGHDNDEYQDDGQDDDRLPREDDDA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA