| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609138
Identifier: 120609138
GI number: 120609138
Start: 472034
End: 473293
Strand: Reverse
Name: 120609138
Synonym: Aave_0435
Alternate gene names: NA
Gene position: 473293-472034 (Counterclockwise)
Preceding gene: 120609139
Following gene: 120609137
Centisome position: 8.84
GC content: 71.19
Gene sequence:
>1260_bases ATGGATGAAATCATGGGTTTTTGGGCGCAATGGCTGCGCCCATCGGCCGGGCTCCCGACGGTGCAGTGGTCCCTGCTGCT GGCCGTCGCGGCGGTTTCGGGCTATCTCTTCCAGCGCCACATCGGCCTGCCCAAGGTGGTGGGCTACACGCTCGTCGGCA CCATCGCCGGGCTGCTGGGCTTCAGCGGCGCCGTCTGGCCCCTGCAGGGCATCAGCCTGTTCCTGCTGGAGCTGGGCATC GCCATCGTGCTGTTCGAGGCGGGCGGGCGCATCCCGCTGCGGTGGTTCCGGCACAACCCGATGGTGCTCGTGCAGAGCAT CATCGAATCGGCGCTGACCTATTTCGCTGTGTACTACGCCATGCTCTGGCTGGACGTGCCCCAGCGCGCCGCGGGCCCGC TGGCGCTGGTGGCCCTGGCGGCGTCGCCCGCCGTGCTCACGCGCGTGGTGGCCGACACCCGCGCCGCCGGCCCGGTGACG GACCGCGCCATCGTCCTGGCCACGCTCTCCACCCTCTACGCGCTCACCCTGGGCAGCGCCACCGCGGAACTGATCAACCG TCCCGCCGCCCGCCTCATGGACACCGTGTACCCCGTCATGGTGGTGCTGGGCGTCTCGATCATCGTCGGCGCGGTGCTCG CCCTGGTCCTGCGCATGGCCCTGCGCTTCATGAGCCCGACGAGCGAGAACACCGCCTTCCTGCTGCTCACGCTGATCGCC GCCGGGACCGCCGTGGCCGCGCACATGGGAGGTTCCGCGCCGCTCGCCGCGCTGCTGGCCGGCATGCTGCTCAAGCAGCT CAACCCGCGCCCGTGGACCTGGCCCCGCCAGCTCGGCACCGCCGCCTCGCTGCTCACCATGCTGATGTTCGTGCTGGTGT CCACCGTCGCCGCGCAGGCCGACTGGAGCGGCCCCGTGGCCGGCCTGGTGCTGGCCCTCATCGTGGCGCGCCTGGTGGCC AAGGCCCTGGGCGTGGCCCTGGGCAACGTGGGCAGCGGCGCCAGCTGGCGCCAGGCCCTGTGGGTGGGCTGCGCGATGAC GCCGATGTCGTCGATCGCACTGCTGATCGCCTCGCAGTTCGTGGTGGCCTCCGCTTCCACCGGGCAGCTCATCGCGCGCG TCGCCCTGCCCACCATCCTGCTCATGGAAGTGCTGGGCGCCGTGATCGCCACGGTGGCCATCTACCGCGCCGGAGAGAGT TCGAAACCCTGGGCGCCCCAGACACGCGCCGCCAACGCAGAGCGGGAGCAGCAGCCATGA
Upstream 100 bases:
>100_bases TACAGCGCCCTCCCGGATCAGCAGGTACATTCGGTCGGCCCCGGCCGGGGGACGCGCGGCCTCCCCGCGCGGATCGGGCG GGAATGCAAGGATCAGAACG
Downstream 100 bases:
>100_bases GCCTCGAAGCCTTCCACCATTCCGAGCCGCTGACGCTCGGCGTCGAGCTCGAGCTGCAGCTCGTCAACACGCACAACTAC GATCTCGCGCCCTACGCCGA
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: Sodium/Hydrogen Exchanger Family Protein; Na/H Antiporter
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MDEIMGFWAQWLRPSAGLPTVQWSLLLAVAAVSGYLFQRHIGLPKVVGYTLVGTIAGLLGFSGAVWPLQGISLFLLELGI AIVLFEAGGRIPLRWFRHNPMVLVQSIIESALTYFAVYYAMLWLDVPQRAAGPLALVALAASPAVLTRVVADTRAAGPVT DRAIVLATLSTLYALTLGSATAELINRPAARLMDTVYPVMVVLGVSIIVGAVLALVLRMALRFMSPTSENTAFLLLTLIA AGTAVAAHMGGSAPLAALLAGMLLKQLNPRPWTWPRQLGTAASLLTMLMFVLVSTVAAQADWSGPVAGLVLALIVARLVA KALGVALGNVGSGASWRQALWVGCAMTPMSSIALLIASQFVVASASTGQLIARVALPTILLMEVLGAVIATVAIYRAGES SKPWAPQTRAANAEREQQP
Sequences:
>Translated_419_residues MDEIMGFWAQWLRPSAGLPTVQWSLLLAVAAVSGYLFQRHIGLPKVVGYTLVGTIAGLLGFSGAVWPLQGISLFLLELGI AIVLFEAGGRIPLRWFRHNPMVLVQSIIESALTYFAVYYAMLWLDVPQRAAGPLALVALAASPAVLTRVVADTRAAGPVT DRAIVLATLSTLYALTLGSATAELINRPAARLMDTVYPVMVVLGVSIIVGAVLALVLRMALRFMSPTSENTAFLLLTLIA AGTAVAAHMGGSAPLAALLAGMLLKQLNPRPWTWPRQLGTAASLLTMLMFVLVSTVAAQADWSGPVAGLVLALIVARLVA KALGVALGNVGSGASWRQALWVGCAMTPMSSIALLIASQFVVASASTGQLIARVALPTILLMEVLGAVIATVAIYRAGES SKPWAPQTRAANAEREQQP >Mature_419_residues MDEIMGFWAQWLRPSAGLPTVQWSLLLAVAAVSGYLFQRHIGLPKVVGYTLVGTIAGLLGFSGAVWPLQGISLFLLELGI AIVLFEAGGRIPLRWFRHNPMVLVQSIIESALTYFAVYYAMLWLDVPQRAAGPLALVALAASPAVLTRVVADTRAAGPVT DRAIVLATLSTLYALTLGSATAELINRPAARLMDTVYPVMVVLGVSIIVGAVLALVLRMALRFMSPTSENTAFLLLTLIA AGTAVAAHMGGSAPLAALLAGMLLKQLNPRPWTWPRQLGTAASLLTMLMFVLVSTVAAQADWSGPVAGLVLALIVARLVA KALGVALGNVGSGASWRQALWVGCAMTPMSSIALLIASQFVVASASTGQLIARVALPTILLMEVLGAVIATVAIYRAGES SKPWAPQTRAANAEREQQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44032; Mature: 44032
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIMGFWAQWLRPSAGLPTVQWSLLLAVAAVSGYLFQRHIGLPKVVGYTLVGTIAGLLG CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FSGAVWPLQGISLFLLELGIAIVLFEAGGRIPLRWFRHNPMVLVQSIIESALTYFAVYYA CCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH MLWLDVPQRAAGPLALVALAASPAVLTRVVADTRAAGPVTDRAIVLATLSTLYALTLGSA HHHHCCCHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH TAELINRPAARLMDTVYPVMVVLGVSIIVGAVLALVLRMALRFMSPTSENTAFLLLTLIA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AGTAVAAHMGGSAPLAALLAGMLLKQLNPRPWTWPRQLGTAASLLTMLMFVLVSTVAAQA HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC DWSGPVAGLVLALIVARLVAKALGVALGNVGSGASWRQALWVGCAMTPMSSIALLIASQF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVASASTGQLIARVALPTILLMEVLGAVIATVAIYRAGESSKPWAPQTRAANAEREQQP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEIMGFWAQWLRPSAGLPTVQWSLLLAVAAVSGYLFQRHIGLPKVVGYTLVGTIAGLLG CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FSGAVWPLQGISLFLLELGIAIVLFEAGGRIPLRWFRHNPMVLVQSIIESALTYFAVYYA CCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH MLWLDVPQRAAGPLALVALAASPAVLTRVVADTRAAGPVTDRAIVLATLSTLYALTLGSA HHHHCCCHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH TAELINRPAARLMDTVYPVMVVLGVSIIVGAVLALVLRMALRFMSPTSENTAFLLLTLIA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AGTAVAAHMGGSAPLAALLAGMLLKQLNPRPWTWPRQLGTAASLLTMLMFVLVSTVAAQA HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC DWSGPVAGLVLALIVARLVAKALGVALGNVGSGASWRQALWVGCAMTPMSSIALLIASQF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VVASASTGQLIARVALPTILLMEVLGAVIATVAIYRAGESSKPWAPQTRAANAEREQQP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA