| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609082
Identifier: 120609082
GI number: 120609082
Start: 407008
End: 407580
Strand: Reverse
Name: 120609082
Synonym: Aave_0379
Alternate gene names: NA
Gene position: 407580-407008 (Counterclockwise)
Preceding gene: 120609083
Following gene: 120609081
Centisome position: 7.61
GC content: 72.08
Gene sequence:
>573_bases ATGCCCTCCACCTCCCGCCCCCCTGCACCGACGCCCCCTCCGGGATTGCCGGCCCGGATCGCGCGGTTGCTGCGCCATCG CTGGGCAGAAGGCGGCCTGCACCGCGCGCTGCCGCCCGATCTGCTCGAACGCCTGGCGCGCCGCGTGGCCGCCAGCGAGG CGCGGCATACGGGGCAGATACGCATTTGCGCCGAAGGCGGGCTGCCCGCAAGCTACCTGTGGCGCGGAGCATCTGCGCGC GAGCGTGCCGTCACGCTCTTCGGCAAGCTGCGCGTGTGGGACACGGAGCACAACAACGGGGTGCTCATCTACCTGCTGCT GGCCGAGCATGCGATCGAGATCGTGGCCGACCGTGCCCTCGCGCGGACCGTGCCGCCCGCGGCCTGGCACGAGATGGTTG CCCGCATGGGCGAAGCCTTCCGCTCCGGACACTACGAGGACGGCCTCACGCAGGCCCTGGAGGAAGTGTCGGCATTGCTG GCGGAGCATTTCCCGGCAGGCCGGGGGCCCCGCAGGGCCAATGAGCTGCCCGACATGCCGGTGCTGGGAAGCGGTGCGCC GGACGGGCCTTGA
Upstream 100 bases:
>100_bases GCGGTGGCGACTTCGGCGGCGGCGGTGCGTCGGGCGACTGGTAGGCCTTTCCGTCCCAGCCCCCTTCTTTCCCATCAACC TCCAGGACCGGATCCGCTCC
Downstream 100 bases:
>100_bases ACGGCCCCCTGCCCCGCCCCCCCTTCGGTTCGCGAATCGACCATCTGCTGCGCATGGACGCAGGACATGCCGCGCCGGCC GCGCGAGCATGGCCTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPSTSRPPAPTPPPGLPARIARLLRHRWAEGGLHRALPPDLLERLARRVAASEARHTGQIRICAEGGLPASYLWRGASAR ERAVTLFGKLRVWDTEHNNGVLIYLLLAEHAIEIVADRALARTVPPAAWHEMVARMGEAFRSGHYEDGLTQALEEVSALL AEHFPAGRGPRRANELPDMPVLGSGAPDGP
Sequences:
>Translated_190_residues MPSTSRPPAPTPPPGLPARIARLLRHRWAEGGLHRALPPDLLERLARRVAASEARHTGQIRICAEGGLPASYLWRGASAR ERAVTLFGKLRVWDTEHNNGVLIYLLLAEHAIEIVADRALARTVPPAAWHEMVARMGEAFRSGHYEDGLTQALEEVSALL AEHFPAGRGPRRANELPDMPVLGSGAPDGP >Mature_189_residues PSTSRPPAPTPPPGLPARIARLLRHRWAEGGLHRALPPDLLERLARRVAASEARHTGQIRICAEGGLPASYLWRGASARE RAVTLFGKLRVWDTEHNNGVLIYLLLAEHAIEIVADRALARTVPPAAWHEMVARMGEAFRSGHYEDGLTQALEEVSALLA EHFPAGRGPRRANELPDMPVLGSGAPDGP
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20664; Mature: 20533
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTSRPPAPTPPPGLPARIARLLRHRWAEGGLHRALPPDLLERLARRVAASEARHTGQI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE RICAEGGLPASYLWRGASARERAVTLFGKLRVWDTEHNNGVLIYLLLAEHAIEIVADRAL EEEECCCCCHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH ARTVPPAAWHEMVARMGEAFRSGHYEDGLTQALEEVSALLAEHFPAGRGPRRANELPDMP HHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VLGSGAPDGP CCCCCCCCCC >Mature Secondary Structure PSTSRPPAPTPPPGLPARIARLLRHRWAEGGLHRALPPDLLERLARRVAASEARHTGQI CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE RICAEGGLPASYLWRGASARERAVTLFGKLRVWDTEHNNGVLIYLLLAEHAIEIVADRAL EEEECCCCCHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHHHHHHH ARTVPPAAWHEMVARMGEAFRSGHYEDGLTQALEEVSALLAEHFPAGRGPRRANELPDMP HHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VLGSGAPDGP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA