| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609081
Identifier: 120609081
GI number: 120609081
Start: 406519
End: 406941
Strand: Reverse
Name: 120609081
Synonym: Aave_0378
Alternate gene names: NA
Gene position: 406941-406519 (Counterclockwise)
Preceding gene: 120609082
Following gene: 120609067
Centisome position: 7.6
GC content: 69.27
Gene sequence:
>423_bases ATGCCGCGCCGGCCGCGCGAGCATGGCCTCGACCTTCCGGAGGGTGCGTTTTTCGACGTGGTCGGACGGTCAACCAGCCT GCTTACCCCTCGGACCCTGAGCGCCATGGAGCAGGCCGTGCTCCGGCAAGTCCGCGATCCAGCCGTGCATCGTGAATTCC TCATGGGCCACTCCACGTGGCGCGCCGGCATGCAGGCCCTGCATCCGCGGGAGTTCCAGGAGCACTTCCGCCTGCGTGAT GCGGATCCGTTCTTCGATGCGGACATTCCGGAAGACCTGGAGGGGCAAGCCGACTATGCCGCACGCGCCCGGCAGGTGGA AGCGCACTGGCGTCGGCGGGAGGACCAGCTGCTGCTCCGGTTGGCGGGCATCAGTCCACCGCCAAGCCCGCCCCCGGGAG GGCCTGCGCCACGGCAGGCATGA
Upstream 100 bases:
>100_bases GGTGCTGGGAAGCGGTGCGCCGGACGGGCCTTGAACGGCCCCCTGCCCCGCCCCCCCTTCGGTTCGCGAATCGACCATCT GCTGCGCATGGACGCAGGAC
Downstream 100 bases:
>100_bases TCATGCCCGAAGCGATGCGTTGGTGGCAGCGCTCGGGACAGGCCATACCCGCCCACCGCCCACCGCAAACAGTCGCCGGC CGGCCATCGGCGCCAGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPRRPREHGLDLPEGAFFDVVGRSTSLLTPRTLSAMEQAVLRQVRDPAVHREFLMGHSTWRAGMQALHPREFQEHFRLRD ADPFFDADIPEDLEGQADYAARARQVEAHWRRREDQLLLRLAGISPPPSPPPGGPAPRQA
Sequences:
>Translated_140_residues MPRRPREHGLDLPEGAFFDVVGRSTSLLTPRTLSAMEQAVLRQVRDPAVHREFLMGHSTWRAGMQALHPREFQEHFRLRD ADPFFDADIPEDLEGQADYAARARQVEAHWRRREDQLLLRLAGISPPPSPPPGGPAPRQA >Mature_139_residues PRRPREHGLDLPEGAFFDVVGRSTSLLTPRTLSAMEQAVLRQVRDPAVHREFLMGHSTWRAGMQALHPREFQEHFRLRDA DPFFDADIPEDLEGQADYAARARQVEAHWRRREDQLLLRLAGISPPPSPPPGGPAPRQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15903; Mature: 15772
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRPREHGLDLPEGAFFDVVGRSTSLLTPRTLSAMEQAVLRQVRDPAVHREFLMGHSTW CCCCCCHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCHHH RAGMQALHPREFQEHFRLRDADPFFDADIPEDLEGQADYAARARQVEAHWRRREDQLLLR HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAGISPPPSPPPGGPAPRQA HHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRRPREHGLDLPEGAFFDVVGRSTSLLTPRTLSAMEQAVLRQVRDPAVHREFLMGHSTW CCCCCHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCHHH RAGMQALHPREFQEHFRLRDADPFFDADIPEDLEGQADYAARARQVEAHWRRREDQLLLR HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAGISPPPSPPPGGPAPRQA HHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA