| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608798
Identifier: 120608798
GI number: 120608798
Start: 93500
End: 94108
Strand: Reverse
Name: 120608798
Synonym: Aave_0088
Alternate gene names: NA
Gene position: 94108-93500 (Counterclockwise)
Preceding gene: 120608799
Following gene: 120608797
Centisome position: 1.76
GC content: 70.44
Gene sequence:
>609_bases ATGCATCTTCACGCCCCCCAGGCCGCATTCCTTGCCGGCCTGCTGGCCTACCAGGCCATCCGCACCATCTACCAGCGCCG CGCGCGCGCTGCGGGCCCGTCCAGGGCGAGCTATTCCAGCCGCCAGGACAAGGCGCTGATCGCGCTGGTGGCGATCGGGC AGATGGTGCTGCCGCTGGCGTACATCTTCACGCCCTGGCTCGATGGAGCCTCGCACGATGTGGCTCCCGACGTGCTGCCG TATGCCGGTGCGCTGGTCTGGGCCGCGGGCCTGTGGGTGTTCTGGCGCGCCCACGCGGAGCTGGGTACGTGGTGGTCGAT CACGCTGGAGATCCGCCACGACCACCAGTTGGTCCAGCGCGGCGTGTACCGCGCGGTGCGGCACCCCATGTATGCCGCGT TCCTGCTGTTCGGCGTGGCGCAGGCCCTGCTGCTGCCCAATGCCATCGCGGGGCCCGCGGCACTGGTCGCGGTGGCCATC CTCTGCATCGTGCGCATCCCCCGCGAGGAGGCGATGATGTGCGAAGTGTTCGGGCAGGCGTACCGCGACTACATGCGGAC CACGGGCGCGGTCATTCCGCGGCTGGTGCCGCGGCGGCGCATCGCCTGA
Upstream 100 bases:
>100_bases GTGCTACCGAGGGTTATGGCTGGCGGAAAGCCTTGCCACTGTCCACTGCGTCCGTGGCGATACAGAATGGCCGGGCGATA GAAAAACAGAGAGGGAACCC
Downstream 100 bases:
>100_bases CCGGCAGCCCCTCGCAGATGCACGTACGTCATCACGCATGCACACGACCCGCTCTCCCGACGGCCTGCACCGCGCAGCCC TGCGCTTCGAGGGCGAGATC
Product: isoprenylcysteine carboxyl methyltransferase
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MHLHAPQAAFLAGLLAYQAIRTIYQRRARAAGPSRASYSSRQDKALIALVAIGQMVLPLAYIFTPWLDGASHDVAPDVLP YAGALVWAAGLWVFWRAHAELGTWWSITLEIRHDHQLVQRGVYRAVRHPMYAAFLLFGVAQALLLPNAIAGPAALVAVAI LCIVRIPREEAMMCEVFGQAYRDYMRTTGAVIPRLVPRRRIA
Sequences:
>Translated_202_residues MHLHAPQAAFLAGLLAYQAIRTIYQRRARAAGPSRASYSSRQDKALIALVAIGQMVLPLAYIFTPWLDGASHDVAPDVLP YAGALVWAAGLWVFWRAHAELGTWWSITLEIRHDHQLVQRGVYRAVRHPMYAAFLLFGVAQALLLPNAIAGPAALVAVAI LCIVRIPREEAMMCEVFGQAYRDYMRTTGAVIPRLVPRRRIA >Mature_202_residues MHLHAPQAAFLAGLLAYQAIRTIYQRRARAAGPSRASYSSRQDKALIALVAIGQMVLPLAYIFTPWLDGASHDVAPDVLP YAGALVWAAGLWVFWRAHAELGTWWSITLEIRHDHQLVQRGVYRAVRHPMYAAFLLFGVAQALLLPNAIAGPAALVAVAI LCIVRIPREEAMMCEVFGQAYRDYMRTTGAVIPRLVPRRRIA
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22409; Mature: 22409
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLHAPQAAFLAGLLAYQAIRTIYQRRARAAGPSRASYSSRQDKALIALVAIGQMVLPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YIFTPWLDGASHDVAPDVLPYAGALVWAAGLWVFWRAHAELGTWWSITLEIRHDHQLVQR HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHH GVYRAVRHPMYAAFLLFGVAQALLLPNAIAGPAALVAVAILCIVRIPREEAMMCEVFGQA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YRDYMRTTGAVIPRLVPRRRIA HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHLHAPQAAFLAGLLAYQAIRTIYQRRARAAGPSRASYSSRQDKALIALVAIGQMVLPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YIFTPWLDGASHDVAPDVLPYAGALVWAAGLWVFWRAHAELGTWWSITLEIRHDHQLVQR HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHH GVYRAVRHPMYAAFLLFGVAQALLLPNAIAGPAALVAVAILCIVRIPREEAMMCEVFGQA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YRDYMRTTGAVIPRLVPRRRIA HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA