| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608797
Identifier: 120608797
GI number: 120608797
Start: 93019
End: 93462
Strand: Reverse
Name: 120608797
Synonym: Aave_0087
Alternate gene names: NA
Gene position: 93462-93019 (Counterclockwise)
Preceding gene: 120608798
Following gene: 120608796
Centisome position: 1.75
GC content: 69.59
Gene sequence:
>444_bases ATGCACACGACCCGCTCTCCCGACGGCCTGCACCGCGCAGCCCTGCGCTTCGAGGGCGAGATCCGCTTCGGGCCGGAGTA CTTCCGGCTGGCCATCGATGGCCGCGAGGTGCCGCACCGGATCTTCGGCAGGCCGCTGTGCTGGTCGCCCGATTCGCGCG TCGTCGTGGCCCAGGAGTGGCTCACCACCGACGATGGCGAGGGCCCCGTCACCTGCGCCGCGCTGATCGACGTGCAGGCC TGGGCGATCGCGCGGCTGGAGGTGGCGGTGAAAGGGTTCGCGGAGGACTTCCGGCCCGATGATGCCGGCACGCTGCGCTA TCGCATGCGCTTTCCGGCCATGGGCGAGGTGTTCGATGTGGCAATGGAGACGAGTGCGGTGCATGCGTGGACGGGCATCG ATGTGCAGCCCCGGCCGCAAGCGCCGCATTCGCAGCCTCTCTAA
Upstream 100 bases:
>100_bases GACTACATGCGGACCACGGGCGCGGTCATTCCGCGGCTGGTGCCGCGGCGGCGCATCGCCTGACCGGCAGCCCCTCGCAG ATGCACGTACGTCATCACGC
Downstream 100 bases:
>100_bases GTCCTCTCTAAGTCTGCAGTCCTAGGATGAAATCGTCGTTGAAAGCCCTGGCGATTTCACCATCGCAAGGGGCGGACGAC ACGGTACCGGCATGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MHTTRSPDGLHRAALRFEGEIRFGPEYFRLAIDGREVPHRIFGRPLCWSPDSRVVVAQEWLTTDDGEGPVTCAALIDVQA WAIARLEVAVKGFAEDFRPDDAGTLRYRMRFPAMGEVFDVAMETSAVHAWTGIDVQPRPQAPHSQPL
Sequences:
>Translated_147_residues MHTTRSPDGLHRAALRFEGEIRFGPEYFRLAIDGREVPHRIFGRPLCWSPDSRVVVAQEWLTTDDGEGPVTCAALIDVQA WAIARLEVAVKGFAEDFRPDDAGTLRYRMRFPAMGEVFDVAMETSAVHAWTGIDVQPRPQAPHSQPL >Mature_147_residues MHTTRSPDGLHRAALRFEGEIRFGPEYFRLAIDGREVPHRIFGRPLCWSPDSRVVVAQEWLTTDDGEGPVTCAALIDVQA WAIARLEVAVKGFAEDFRPDDAGTLRYRMRFPAMGEVFDVAMETSAVHAWTGIDVQPRPQAPHSQPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16485; Mature: 16485
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTTRSPDGLHRAALRFEGEIRFGPEYFRLAIDGREVPHRIFGRPLCWSPDSRVVVAQEW CCCCCCCCCHHEEHEEECCEEEECCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEC LTTDDGEGPVTCAALIDVQAWAIARLEVAVKGFAEDFRPDDAGTLRYRMRFPAMGEVFDV CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH AMETSAVHAWTGIDVQPRPQAPHSQPL HHCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MHTTRSPDGLHRAALRFEGEIRFGPEYFRLAIDGREVPHRIFGRPLCWSPDSRVVVAQEW CCCCCCCCCHHEEHEEECCEEEECCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEC LTTDDGEGPVTCAALIDVQAWAIARLEVAVKGFAEDFRPDDAGTLRYRMRFPAMGEVFDV CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH AMETSAVHAWTGIDVQPRPQAPHSQPL HHCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA