Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120599208

Identifier: 120599208

GI number: 120599208

Start: 2774865

End: 2775671

Strand: Direct

Name: 120599208

Synonym: Sputw3181_2404

Alternate gene names: NA

Gene position: 2774865-2775671 (Clockwise)

Preceding gene: 120599201

Following gene: 120599215

Centisome position: 58.93

GC content: 40.15

Gene sequence:

>807_bases
ATGCACTTACAAGGCAGTAGCTACCCACTTTTATGCTTCATCCTCTTTACCAGTTTAAGCTCTATGGTATTTGCCCAAGG
GCAGCAAGTCGATCCCATCCCCCAAATACGCGTAGGAGGGTATCAATTTGCCCCTTATGTTAATCTTCAACAGGATGGGC
GCTATACTGGCCTAACCCTCGATATTATTAATGCGCTCAATCAAGTACAACAGGATGTTAGATTTGAATTTGTCTCTACC
AGCATAGAGCATAGATATAAAGCCTATTCAGTAGGACGATTCGATATGATGATGTTTGAGAACCCTAATTGGGGTTGGCA
ACAAATCGAGACCCAATTTATTCCTTTACACATCACCGATGGTGAAGCTTTTATTGCCCTAAAGAGTAAAGCGAGAAATC
AGTTGTTTTTTAGCACTCTGACCAATAAATCGATCGCCTTAGTTAAAGGCTACCACTATCGCTTCGCACAATTAGAAACA
AATCCTGAGCACCTTGAAAAACAGTTCAATATTATATACGTAAACAATAATAAAGCTTCGATCGAGAGTATTTTACGCAA
ACGCGCTGATGTTGCACCTGTAACTTATTCTTACCTCAATCACTATCTCAAGCTCAATCCCCAAGAACAACCACTATTAC
TCATATCTGAGAAATGGGATCAACACTATACCCATAACATTCTATTGAAGCCGAACTCAGTACTCGAAGCGACAAAGCTA
TCCCATTGGTTACAATTACTGACTGATAACGGGAAGTTGGCAGAATTAGCACAAAATTATGACATCACACTCACCACGTC
AGATTAA

Upstream 100 bases:

>100_bases
ACAAAAATACGCATTAACAATACGTAAGTGCTGCAATTAATTGTATTAACTTGTAACAACCACAGGTAAGCTAAGGCCGT
GGTGAATAACAGGAGAACCT

Downstream 100 bases:

>100_bases
TGTGCTTTCCTATCACATCATTGCCATTAAGGGCTCCAACATAGACAAAATACCAATGAGTAGAAACACCAGAGCTTGGA
GACTCAACATAAGTCCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MHLQGSSYPLLCFILFTSLSSMVFAQGQQVDPIPQIRVGGYQFAPYVNLQQDGRYTGLTLDIINALNQVQQDVRFEFVST
SIEHRYKAYSVGRFDMMMFENPNWGWQQIETQFIPLHITDGEAFIALKSKARNQLFFSTLTNKSIALVKGYHYRFAQLET
NPEHLEKQFNIIYVNNNKASIESILRKRADVAPVTYSYLNHYLKLNPQEQPLLLISEKWDQHYTHNILLKPNSVLEATKL
SHWLQLLTDNGKLAELAQNYDITLTTSD

Sequences:

>Translated_268_residues
MHLQGSSYPLLCFILFTSLSSMVFAQGQQVDPIPQIRVGGYQFAPYVNLQQDGRYTGLTLDIINALNQVQQDVRFEFVST
SIEHRYKAYSVGRFDMMMFENPNWGWQQIETQFIPLHITDGEAFIALKSKARNQLFFSTLTNKSIALVKGYHYRFAQLET
NPEHLEKQFNIIYVNNNKASIESILRKRADVAPVTYSYLNHYLKLNPQEQPLLLISEKWDQHYTHNILLKPNSVLEATKL
SHWLQLLTDNGKLAELAQNYDITLTTSD
>Mature_268_residues
MHLQGSSYPLLCFILFTSLSSMVFAQGQQVDPIPQIRVGGYQFAPYVNLQQDGRYTGLTLDIINALNQVQQDVRFEFVST
SIEHRYKAYSVGRFDMMMFENPNWGWQQIETQFIPLHITDGEAFIALKSKARNQLFFSTLTNKSIALVKGYHYRFAQLET
NPEHLEKQFNIIYVNNNKASIESILRKRADVAPVTYSYLNHYLKLNPQEQPLLLISEKWDQHYTHNILLKPNSVLEATKL
SHWLQLLTDNGKLAELAQNYDITLTTSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30998; Mature: 30998

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLQGSSYPLLCFILFTSLSSMVFAQGQQVDPIPQIRVGGYQFAPYVNLQQDGRYTGLTL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCEEEECCCCCEEEEHH
DIINALNQVQQDVRFEFVSTSIEHRYKAYSVGRFDMMMFENPNWGWQQIETQFIPLHITD
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCHHHHEEEEEEEEEEC
GEAFIALKSKARNQLFFSTLTNKSIALVKGYHYRFAQLETNPEHLEKQFNIIYVNNNKAS
CCEEEEEECCCCCEEEEEECCCCCEEEEECCEEEEEEECCCHHHHHCEEEEEEEECCHHH
IESILRKRADVAPVTYSYLNHYLKLNPQEQPLLLISEKWDQHYTHNILLKPNSVLEATKL
HHHHHHHHCCCCCEEHHHHHHHEECCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHH
SHWLQLLTDNGKLAELAQNYDITLTTSD
HHHHHHHCCCCHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MHLQGSSYPLLCFILFTSLSSMVFAQGQQVDPIPQIRVGGYQFAPYVNLQQDGRYTGLTL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCEEEECCCCCEEEEHH
DIINALNQVQQDVRFEFVSTSIEHRYKAYSVGRFDMMMFENPNWGWQQIETQFIPLHITD
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCHHHHEEEEEEEEEEC
GEAFIALKSKARNQLFFSTLTNKSIALVKGYHYRFAQLETNPEHLEKQFNIIYVNNNKAS
CCEEEEEECCCCCEEEEEECCCCCEEEEECCEEEEEEECCCHHHHHCEEEEEEEECCHHH
IESILRKRADVAPVTYSYLNHYLKLNPQEQPLLLISEKWDQHYTHNILLKPNSVLEATKL
HHHHHHHHCCCCCEEHHHHHHHEECCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHH
SHWLQLLTDNGKLAELAQNYDITLTTSD
HHHHHHHCCCCHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA