| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is pykA [H]
Identifier: 120598952
GI number: 120598952
Start: 2469067
End: 2470506
Strand: Direct
Name: pykA [H]
Synonym: Sputw3181_2144
Alternate gene names: 120598952
Gene position: 2469067-2470506 (Clockwise)
Preceding gene: 120598951
Following gene: 120598953
Centisome position: 52.44
GC content: 47.43
Gene sequence:
>1440_bases ATGTTCCGCAGAACCAAAATCGTCACCACACTCGGCCCCGCCACTGATCGTGATGATAATCTACGCCGCATTATCGCGGC AGGTGCAAATGTTGTACGTCTTAACTTTTCCCACGGCTCCCCCGAAGATCATCTCAAACGAGCAACTCAAGCTCGTGAAA TAGCAAAAGAATTAGGTGTTCACGTTGCTATTCTTGGTGACTTACAAGGGCCTAAAATCCGCGTTTCTACTTTCAAAGAC AACAAGAAAGTTCAGCTCAAACTCGGTCAAGCCTATGTTTTAGATGCTGAGCTCGCTAAAGGTGAAGGTGACGAGACCCA AGTCGGTATCGATTACAAGCAATTGCCAGACGACGTGACGGTCGGCGATATCCTGATGTTAGATGATGGCCGTGTTCAAT TACGTGTTGAAGGTGTTGAAGGCCGTAAGGTTCACACCACAGTGACGGTTGCGGGTCCTTTATCAAACAATAAGGGGATT AATAAGCAAGGTGGTGGTTTATCTGCCGCGGCGCTGACCGAAAAAGATAAAGCAGACATTCTGACGGCCGCAATGATCCA AGTGGATTATTTAGCCGTGTCTTTCCCACGTAGTGGTGCTGATCTCGATTACGCCCGCGATCTTGCCCGTCAAGCAGGTT GTAATGCACTGATTGTTGCTAAAGTTGAACGTGCAGAAGCCGTTGCCACTGATGAAGCGATGGATGATGTGATCTTAGCG TCTGATGTTGTTATGGTTGCCCGTGGTGACTTAGGCGTTGAAATTGGTGATGCTGCACTCGTTGCAGTGCAAAAGAAACT TATCGCCCGTTCACGTCAACTCAACAAAATCGTCATTACAGCGACACAAATGATGGAGTCGATGATTTCAAGCCCAATGC CAACCCGCGCCGAAGTAATGGACGTGGCAAACGCTGTGCTCGACGGGACTGATGCCGTAATGTTATCAGCCGAAACCGCT GCGGGAGATTTTCCTGAAGAAACCGTTAAGGCGATGGCAAATGTGTGTGTCGGTGCAGAGTCGCACCCAAGTGTTAAAGT GTCTAAGCATAGATTAGATGCACGCTTTACTTCTGTGGAAGAGACCATTGCCCTATCGACTATGTATGCGGCAAACCATT TAGAAGGTGTTAAAGCGATTATCGCCTTAACCGAATCGGGTGCAACACCTCAGATGATGTCGCGCATCAGTTCTTCACTG CCCATCCTTGGTTTATCACGCCATGCGACAACACTCGCTAAGATGGCATTATATCGCGGTGTATTACCGATTTACTTTGA TTCAACTATCTATCCAGCCGATCTATTAGCACAAAAAGCCTTAGAGTCACTGACAACCGCCGGTTATTTACAAAGCGGCG ATTTAGTTTTGATGACCAAGGGCGATGCAATGGAAACTATCGGTGGCACTAACACTTGTAAGGTGTTGATTGTTGCTTAA
Upstream 100 bases:
>100_bases GAAACATAACTTTAGATCAATTTGTTTGTAACTTTACTACATAATTTGGAATGGCATGGTAATATAGTCTCAAGATTTTT TAACTTTAACGGAGTATCTT
Downstream 100 bases:
>100_bases GTTTCTTATCGTCACTAAAACAGTGTTAGAAAATTAGCCAATAAAAAACCACCTAATGAAGGCTGTCTTTTATACAGAAG TCCCTCATATGATATGAGGG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGVHVAILGDLQGPKIRVSTFKD NKKVQLKLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVTVGDILMLDDGRVQLRVEGVEGRKVHTTVTVAGPLSNNKGI NKQGGGLSAAALTEKDKADILTAAMIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDEAMDDVILA SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKIVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMANVCVGAESHPSVKVSKHRLDARFTSVEETIALSTMYAANHLEGVKAIIALTESGATPQMMSRISSSL PILGLSRHATTLAKMALYRGVLPIYFDSTIYPADLLAQKALESLTTAGYLQSGDLVLMTKGDAMETIGGTNTCKVLIVA
Sequences:
>Translated_479_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGVHVAILGDLQGPKIRVSTFKD NKKVQLKLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVTVGDILMLDDGRVQLRVEGVEGRKVHTTVTVAGPLSNNKGI NKQGGGLSAAALTEKDKADILTAAMIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDEAMDDVILA SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKIVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMANVCVGAESHPSVKVSKHRLDARFTSVEETIALSTMYAANHLEGVKAIIALTESGATPQMMSRISSSL PILGLSRHATTLAKMALYRGVLPIYFDSTIYPADLLAQKALESLTTAGYLQSGDLVLMTKGDAMETIGGTNTCKVLIVA >Mature_479_residues MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGVHVAILGDLQGPKIRVSTFKD NKKVQLKLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVTVGDILMLDDGRVQLRVEGVEGRKVHTTVTVAGPLSNNKGI NKQGGGLSAAALTEKDKADILTAAMIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDEAMDDVILA SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKIVITATQMMESMISSPMPTRAEVMDVANAVLDGTDAVMLSAETA AGDFPEETVKAMANVCVGAESHPSVKVSKHRLDARFTSVEETIALSTMYAANHLEGVKAIIALTESGATPQMMSRISSSL PILGLSRHATTLAKMALYRGVLPIYFDSTIYPADLLAQKALESLTTAGYLQSGDLVLMTKGDAMETIGGTNTCKVLIVA
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=493, Percent_Identity=34.6855983772819, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI33286420, Length=493, Percent_Identity=34.6855983772819, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=34.6855983772819, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI32967597, Length=494, Percent_Identity=34.2105263157895, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI10835121, Length=494, Percent_Identity=34.2105263157895, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=33.9100346020761, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=33.9100346020761, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=31.9148936170213, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=31.9148936170213, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=31.3084112149533, Blast_Score=93, Evalue=7e-19, Organism=Escherichia coli, GI1788160, Length=477, Percent_Identity=71.6981132075472, Blast_Score=674, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=482, Percent_Identity=36.0995850622407, Blast_Score=274, Evalue=8e-75, Organism=Caenorhabditis elegans, GI17544584, Length=487, Percent_Identity=36.3449691991786, Blast_Score=271, Evalue=4e-73, Organism=Caenorhabditis elegans, GI71984406, Length=493, Percent_Identity=33.4685598377282, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71984413, Length=493, Percent_Identity=33.4685598377282, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17506831, Length=493, Percent_Identity=33.4685598377282, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17506829, Length=493, Percent_Identity=33.4685598377282, Blast_Score=223, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6319279, Length=477, Percent_Identity=35.4297693920335, Blast_Score=246, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6324923, Length=485, Percent_Identity=32.1649484536082, Blast_Score=215, Evalue=1e-56, Organism=Drosophila melanogaster, GI24648964, Length=498, Percent_Identity=34.5381526104418, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI28571814, Length=498, Percent_Identity=34.5381526104418, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI24648966, Length=453, Percent_Identity=34.878587196468, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24581235, Length=497, Percent_Identity=31.7907444668008, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24646914, Length=278, Percent_Identity=35.9712230215827, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50997; Mature: 50997
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGV CCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC HVAILGDLQGPKIRVSTFKDNKKVQLKLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVT EEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEECHHHCCCCCCEEECCCHHHCCCCCC VGDILMLDDGRVQLRVEGVEGRKVHTTVTVAGPLSNNKGINKQGGGLSAAALTEKDKADI CCEEEEEECCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHH LTAAMIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDEAMDDVILA HHHHHHEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHH SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKIVITATQMMESMISSPMPTRAEVM CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHH DVANAVLDGTDAVMLSAETAAGDFPEETVKAMANVCVGAESHPSVKVSKHRLDARFTSVE HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHH ETIALSTMYAANHLEGVKAIIALTESGATPQMMSRISSSLPILGLSRHATTLAKMALYRG HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHC VLPIYFDSTIYPADLLAQKALESLTTAGYLQSGDLVLMTKGDAMETIGGTNTCKVLIVA CCEEEECCCCCCHHHHHHHHHHHHHHHCCEECCCEEEEECCCCHHHCCCCCCEEEEEEC >Mature Secondary Structure MFRRTKIVTTLGPATDRDDNLRRIIAAGANVVRLNFSHGSPEDHLKRATQAREIAKELGV CCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC HVAILGDLQGPKIRVSTFKDNKKVQLKLGQAYVLDAELAKGEGDETQVGIDYKQLPDDVT EEEEEECCCCCEEEEEEECCCCEEEEEECCEEEEECHHHCCCCCCEEECCCHHHCCCCCC VGDILMLDDGRVQLRVEGVEGRKVHTTVTVAGPLSNNKGINKQGGGLSAAALTEKDKADI CCEEEEEECCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHH LTAAMIQVDYLAVSFPRSGADLDYARDLARQAGCNALIVAKVERAEAVATDEAMDDVILA HHHHHHEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHH SDVVMVARGDLGVEIGDAALVAVQKKLIARSRQLNKIVITATQMMESMISSPMPTRAEVM CCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHH DVANAVLDGTDAVMLSAETAAGDFPEETVKAMANVCVGAESHPSVKVSKHRLDARFTSVE HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHH ETIALSTMYAANHLEGVKAIIALTESGATPQMMSRISSSLPILGLSRHATTLAKMALYRG HHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHC VLPIYFDSTIYPADLLAQKALESLTTAGYLQSGDLVLMTKGDAMETIGGTNTCKVLIVA CCEEEECCCCCCHHHHHHHHHHHHHHHCCEECCCEEEEECCCCHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]