Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yfiP [H]

Identifier: 120598799

GI number: 120598799

Start: 2300124

End: 2300894

Strand: Direct

Name: yfiP [H]

Synonym: Sputw3181_1985

Alternate gene names: 120598799

Gene position: 2300124-2300894 (Clockwise)

Preceding gene: 120598796

Following gene: 120598801

Centisome position: 48.85

GC content: 46.04

Gene sequence:

>771_bases
ATGGCTCTAGCCCCCCATGCCGTCCACCGTCTATATGAGTACCGTAAGTCTATTTCGACTAAGCCTTTTGGTGCCCGTGG
CAAAAAATTGATCCGCTGCCCATTATGCCTTTTAGGTGAGCAGTTTTGTACCTGTGCGCTGCGCCGTCAGTTACAGACTC
AAGCCAGTTTTTTGCTGATCATGTATAACGATGAAGTGTTAAAACCGACGAATAGTGGCCGACTCATTGCGGATCTTATT
CCTGATACTCATGCCTATATTTGGTCACGTACAGAACCTGAAGCTGAGTTGCTTGGCTTGCTTGAGTCGCCGCAATATCA
ACCTTATTTAGTGTTTCCAGCCCAATATGCAGAGCAAGGGCAGATTGTACTAAATCAAGTACCTATGTCGACATTAGCTG
AAGGTAAACGGCCGCTGCTGATCATGCTTGATGGCAGTTGGCGTGAAGCGATAAAAATGTTCCGTAAGAGTCCTTATTTG
CACTCGTTGCCCTTATTATCATTCGATCCCGATACGCTTGCGACATATGCGCTACGAAAGGGGAGTCACGACTTTCAACT
GGGTACCGCTGAGGTCGCTTCTTTAGCGTTAGCCGCGATAGGTGAGGAGGCAAATAGCAAAGCCCTTAGCACTTGGTTTG
ATTTGTTTGTTGAATCATCATTACTTGGTCGTAATCGGCGTTGTAGAGAAGATCTTTTACCCATTTCATCCTTTACAGAT
GCTGTTGAAGCGGCTTATGAAAAGGCAAATGCCATTTTGCCCAGCGTTTAA

Upstream 100 bases:

>100_bases
TGCGCCATTGATGGTCAAGGGATAAACTGCGTCGCCGCAATAGGGAAGATTAAAAGCCCTCCATTGCAGCTTATCATAAG
TTTGAAAGAGAATTGGTTTT

Downstream 100 bases:

>100_bases
TTTATTTCAGTGGAAGAACGAAACTTCACAAATAAAACTCCCCTAACAAGTAGGGGAGTTTTGCTTTAATTGCGTTTATT
TTTAACTGCTATGGTTAAAC

Product: DTW domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MALAPHAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLIMYNDEVLKPTNSGRLIADLI
PDTHAYIWSRTEPEAELLGLLESPQYQPYLVFPAQYAEQGQIVLNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYL
HSLPLLSFDPDTLATYALRKGSHDFQLGTAEVASLALAAIGEEANSKALSTWFDLFVESSLLGRNRRCREDLLPISSFTD
AVEAAYEKANAILPSV

Sequences:

>Translated_256_residues
MALAPHAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLIMYNDEVLKPTNSGRLIADLI
PDTHAYIWSRTEPEAELLGLLESPQYQPYLVFPAQYAEQGQIVLNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYL
HSLPLLSFDPDTLATYALRKGSHDFQLGTAEVASLALAAIGEEANSKALSTWFDLFVESSLLGRNRRCREDLLPISSFTD
AVEAAYEKANAILPSV
>Mature_255_residues
ALAPHAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLIMYNDEVLKPTNSGRLIADLIP
DTHAYIWSRTEPEAELLGLLESPQYQPYLVFPAQYAEQGQIVLNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYLH
SLPLLSFDPDTLATYALRKGSHDFQLGTAEVASLALAAIGEEANSKALSTWFDLFVESSLLGRNRRCREDLLPISSFTDA
VEAAYEKANAILPSV

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTW family [H]

Homologues:

Organism=Escherichia coli, GI87082133, Length=221, Percent_Identity=44.7963800904977, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005636 [H]

Pfam domain/function: PF03942 DTW [H]

EC number: NA

Molecular weight: Translated: 28662; Mature: 28531

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAPHAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLI
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEE
MYNDEVLKPTNSGRLIADLIPDTHAYIWSRTEPEAELLGLLESPQYQPYLVFPAQYAEQG
EECCCEECCCCCCCEEEECCCCCHHEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCC
QIVLNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYLHSLPLLSFDPDTLATYALRK
CEEEECCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHC
GSHDFQLGTAEVASLALAAIGEEANSKALSTWFDLFVESSLLGRNRRCREDLLPISSFTD
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH
AVEAAYEKANAILPSV
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALAPHAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCALRRQLQTQASFLLI
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEE
MYNDEVLKPTNSGRLIADLIPDTHAYIWSRTEPEAELLGLLESPQYQPYLVFPAQYAEQG
EECCCEECCCCCCCEEEECCCCCHHEEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCCC
QIVLNQVPMSTLAEGKRPLLIMLDGSWREAIKMFRKSPYLHSLPLLSFDPDTLATYALRK
CEEEECCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHC
GSHDFQLGTAEVASLALAAIGEEANSKALSTWFDLFVESSLLGRNRRCREDLLPISSFTD
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH
AVEAAYEKANAILPSV
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]