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The map label for this gene is 120598777

Identifier: 120598777

GI number: 120598777

Start: 2270706

End: 2272592

Strand: Direct

Name: 120598777

Synonym: Sputw3181_1962

Alternate gene names: NA

Gene position: 2270706-2272592 (Clockwise)

Preceding gene: 120598776

Following gene: 120598780

Centisome position: 48.23

GC content: 47.96

Gene sequence:

>1887_bases
ATGACTCATTCTCTGACAACATTGATGGCCGCGATGGCGCTCACATTTGGCTTTAGCACTGGAGTGGTTGAAGCGTCACC
TGTGCTTCCTGATAATCATATTACCAGTGAAACCTTTGCCAACCCATTGTTTCGTAATGGTGCAGATCCTTGGCTTGCAT
ACCATAATGGAAACTATTATTTAACGACGACCACTTGGACCTCTGAATTGGTGATGCGTAAATCGCCTACCATAGCAGGG
CTTGCCGATGCCCCTGCGCACAATATTTGGTCAGACGATGATAAGTCCCGTTGCTGTAATTTTTGGGCGTTTGAATTCCA
CCCCATGCAAACCGCAGAAGGTTTGCGTTGGTATGTGATTTATACCTCGGGTGTGGCTGAAAATTTTGATGGTCAGCGCA
ATCATATCCTCGAGAGCGAGGGCAGCGATCCTATGGGGCCCTATAAGTTTAAAGGCACTCCTATGCCGGATCATTGGAAT
ATCGATGGCAGTTACTTACAGCACAAGGGGCAGTTGTACTTTTTGTGGTCAGAATGGCATGGTAAAGATCAAGTGAACCT
CATCGCTAAAATGACCAATCCTTGGACGATAACGGGCGATCATAAAGTGATCACTAAGCCCATTTATGACTGGGAAAAGT
CCGGTTTAAATGTCAATGAAGGGCCTGAGATTATTCAGCGTGATGGACGCACTTTCCTCGTCCATTCGGCAAGTTTTTGT
AATACAGAGGATTATTCTCTCGGTGTTGTTGAGCTGACAGGGGAGGATCCTATGGATCCTGCGGCTTGGACAAAATTCGA
CAAACCCTTCTTCAGTAAAGCCAATGGCGTATATGGCCCAGGCCATCACGGATTTTTCACTTCCCCCGATGGCAGCGAAG
ATTGGTTAGTGTATCACGGTAACTCATCACCCACAGATGGTTGCAGTGGCACCCGCGCCGCCAGAGCACAACCTTTTAAG
TGGGATGATAAAGGCTTACCGCAGTTTGGTGAGCCATTAGCCGACAAGCAACAGTTACCTGTTCCAAGCGGCGAGTTTGG
GCCATTAAAAGCCCAAGTTGAAGGGGTGAAATACCGCATCGTCAATCGTGATATTAATCAATGTTTAGTGACCAATGCGA
AAGGAGAAGTCAGTGTTGGTCAGTGTGATGATAAAGCCAGTGCTTGGATTATCGACCCTGCTAACGATGGTTTATATCGG
TTTGCTAATGTGGCCGAAGGGACCTTTTTAACGCAAGCTGACTGCCAAGATGAAAAGGCCTCGGACGTGAATGCCGCGCC
TTGGGTTGCGTCCCGTTGTCAGCGTTGGTCGGTTGATGCGAGTCGTGATGGCTGGTTCCGTTTTGCCAATGAGCGCTCGA
TTAAAAATCTACAAGCGGCCAATTGCAGCAGCAAAAAGAATACGGCTGTGGTTGCCGGTGAAAATCGTGTTAGTGAATGT
ACTGACTGGCGTATCGAACCCATATCCCATTTTGCAATTGTAAATGCCCACAGTGGCCGTGTAGTCTCAGCGCAGCAATG
TGACACAAAGGCCAATGCTAATGTTGTGCAATATGAATACACAGGTAACGCCTGCCAGCAATGGCACGCGACATCCACCA
GTGAAGGCTATTACCGTCTGCAATCAAATCAACTGACGGCGAATAAACAAGCCCAGTGCTTAGTCAGTGTTGAGGGCAAT
TTGCAACTTGGCGCCTGTGATAAAGATGACAGCGAATGGCGCACTGAGTTTATGCCAAATGGTTCCCTTCGAGTGGTATC
GCGCAAAGGGGGATCGTCGATGAAAGTCGCGGGCGAGTCCTATGCCAATGGCGACAATATTGTTGAGGATGTGTGGAAGA
ATACCATTTCGCAGCAGTTCTATTTCAGGGAGGTGAAAACCAAATAG

Upstream 100 bases:

>100_bases
CTGAATTAACATGGAATACCCAAGGTTGGCCTGTCGTTGATCCAAATGCGCTGACTCAATATAAAAGTGTATTAGTTGAC
CCAATCGGAAATAAATAATA

Downstream 100 bases:

>100_bases
CCCAAACTATTTTAGGGAGGGTGATGTTTCGAGATTCATTTTTGTTTGTTCTGGTCCAGATTTACCAAAATCTAGGGCAG
GTAGCGACAAAAAATAACCC

Product: Alpha-N-arabinofuranosidase

Products: NA

Alternate protein names: Alpha-N-arabinofuranosidase II; Alpha-N-AFase II; Arabinosidase II [H]

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MTHSLTTLMAAMALTFGFSTGVVEASPVLPDNHITSETFANPLFRNGADPWLAYHNGNYYLTTTTWTSELVMRKSPTIAG
LADAPAHNIWSDDDKSRCCNFWAFEFHPMQTAEGLRWYVIYTSGVAENFDGQRNHILESEGSDPMGPYKFKGTPMPDHWN
IDGSYLQHKGQLYFLWSEWHGKDQVNLIAKMTNPWTITGDHKVITKPIYDWEKSGLNVNEGPEIIQRDGRTFLVHSASFC
NTEDYSLGVVELTGEDPMDPAAWTKFDKPFFSKANGVYGPGHHGFFTSPDGSEDWLVYHGNSSPTDGCSGTRAARAQPFK
WDDKGLPQFGEPLADKQQLPVPSGEFGPLKAQVEGVKYRIVNRDINQCLVTNAKGEVSVGQCDDKASAWIIDPANDGLYR
FANVAEGTFLTQADCQDEKASDVNAAPWVASRCQRWSVDASRDGWFRFANERSIKNLQAANCSSKKNTAVVAGENRVSEC
TDWRIEPISHFAIVNAHSGRVVSAQQCDTKANANVVQYEYTGNACQQWHATSTSEGYYRLQSNQLTANKQAQCLVSVEGN
LQLGACDKDDSEWRTEFMPNGSLRVVSRKGGSSMKVAGESYANGDNIVEDVWKNTISQQFYFREVKTK

Sequences:

>Translated_628_residues
MTHSLTTLMAAMALTFGFSTGVVEASPVLPDNHITSETFANPLFRNGADPWLAYHNGNYYLTTTTWTSELVMRKSPTIAG
LADAPAHNIWSDDDKSRCCNFWAFEFHPMQTAEGLRWYVIYTSGVAENFDGQRNHILESEGSDPMGPYKFKGTPMPDHWN
IDGSYLQHKGQLYFLWSEWHGKDQVNLIAKMTNPWTITGDHKVITKPIYDWEKSGLNVNEGPEIIQRDGRTFLVHSASFC
NTEDYSLGVVELTGEDPMDPAAWTKFDKPFFSKANGVYGPGHHGFFTSPDGSEDWLVYHGNSSPTDGCSGTRAARAQPFK
WDDKGLPQFGEPLADKQQLPVPSGEFGPLKAQVEGVKYRIVNRDINQCLVTNAKGEVSVGQCDDKASAWIIDPANDGLYR
FANVAEGTFLTQADCQDEKASDVNAAPWVASRCQRWSVDASRDGWFRFANERSIKNLQAANCSSKKNTAVVAGENRVSEC
TDWRIEPISHFAIVNAHSGRVVSAQQCDTKANANVVQYEYTGNACQQWHATSTSEGYYRLQSNQLTANKQAQCLVSVEGN
LQLGACDKDDSEWRTEFMPNGSLRVVSRKGGSSMKVAGESYANGDNIVEDVWKNTISQQFYFREVKTK
>Mature_627_residues
THSLTTLMAAMALTFGFSTGVVEASPVLPDNHITSETFANPLFRNGADPWLAYHNGNYYLTTTTWTSELVMRKSPTIAGL
ADAPAHNIWSDDDKSRCCNFWAFEFHPMQTAEGLRWYVIYTSGVAENFDGQRNHILESEGSDPMGPYKFKGTPMPDHWNI
DGSYLQHKGQLYFLWSEWHGKDQVNLIAKMTNPWTITGDHKVITKPIYDWEKSGLNVNEGPEIIQRDGRTFLVHSASFCN
TEDYSLGVVELTGEDPMDPAAWTKFDKPFFSKANGVYGPGHHGFFTSPDGSEDWLVYHGNSSPTDGCSGTRAARAQPFKW
DDKGLPQFGEPLADKQQLPVPSGEFGPLKAQVEGVKYRIVNRDINQCLVTNAKGEVSVGQCDDKASAWIIDPANDGLYRF
ANVAEGTFLTQADCQDEKASDVNAAPWVASRCQRWSVDASRDGWFRFANERSIKNLQAANCSSKKNTAVVAGENRVSECT
DWRIEPISHFAIVNAHSGRVVSAQQCDTKANANVVQYEYTGNACQQWHATSTSEGYYRLQSNQLTANKQAQCLVSVEGNL
QLGACDKDDSEWRTEFMPNGSLRVVSRKGGSSMKVAGESYANGDNIVEDVWKNTISQQFYFREVKTK

Specific function: Unknown

COG id: COG3940

COG function: function code R; Predicted beta-xylosidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016828
- InterPro:   IPR006710
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 69914; Mature: 69783

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSLTTLMAAMALTFGFSTGVVEASPVLPDNHITSETFANPLFRNGADPWLAYHNGNYY
CCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHCHHHHCCCCCEEEEECCCEE
LTTTTWTSELVMRKSPTIAGLADAPAHNIWSDDDKSRCCNFWAFEFHPMQTAEGLRWYVI
EEEECCCHHHHEECCCCEEECCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCCCEEEEE
YTSGVAENFDGQRNHILESEGSDPMGPYKFKGTPMPDHWNIDGSYLQHKGQLYFLWSEWH
EECCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCC
GKDQVNLIAKMTNPWTITGDHKVITKPIYDWEKSGLNVNEGPEIIQRDGRTFLVHSASFC
CCCCEEEEEEECCCEEEECCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCEEEEEECCCC
NTEDYSLGVVELTGEDPMDPAAWTKFDKPFFSKANGVYGPGHHGFFTSPDGSEDWLVYHG
CCCCCEEEEEEECCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC
NSSPTDGCSGTRAARAQPFKWDDKGLPQFGEPLADKQQLPVPSGEFGPLKAQVEGVKYRI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEE
VNRDINQCLVTNAKGEVSVGQCDDKASAWIIDPANDGLYRFANVAEGTFLTQADCQDEKA
ECCCCCHHEEECCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCC
SDVNAAPWVASRCQRWSVDASRDGWFRFANERSIKNLQAANCSSKKNTAVVAGENRVSEC
CCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEEEECCCCCCCC
TDWRIEPISHFAIVNAHSGRVVSAQQCDTKANANVVQYEYTGNACQQWHATSTSEGYYRL
CCCEECCCCEEEEEECCCCCEEEHHHCCCCCCCCEEEEEECCCHHHHCCCCCCCCCEEEE
QSNQLTANKQAQCLVSVEGNLQLGACDKDDSEWRTEFMPNGSLRVVSRKGGSSMKVAGES
ECCEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHCCCCCCEEEEEECCCCEEEECCCC
YANGDNIVEDVWKNTISQQFYFREVKTK
CCCCCHHHHHHHHHHHHHHHEEHEECCC
>Mature Secondary Structure 
THSLTTLMAAMALTFGFSTGVVEASPVLPDNHITSETFANPLFRNGADPWLAYHNGNYY
CCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHCHHHHCCCCCEEEEECCCEE
LTTTTWTSELVMRKSPTIAGLADAPAHNIWSDDDKSRCCNFWAFEFHPMQTAEGLRWYVI
EEEECCCHHHHEECCCCEEECCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCCCEEEEE
YTSGVAENFDGQRNHILESEGSDPMGPYKFKGTPMPDHWNIDGSYLQHKGQLYFLWSEWH
EECCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCEEEEEECCC
GKDQVNLIAKMTNPWTITGDHKVITKPIYDWEKSGLNVNEGPEIIQRDGRTFLVHSASFC
CCCCEEEEEEECCCEEEECCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCEEEEEECCCC
NTEDYSLGVVELTGEDPMDPAAWTKFDKPFFSKANGVYGPGHHGFFTSPDGSEDWLVYHG
CCCCCEEEEEEECCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC
NSSPTDGCSGTRAARAQPFKWDDKGLPQFGEPLADKQQLPVPSGEFGPLKAQVEGVKYRI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEE
VNRDINQCLVTNAKGEVSVGQCDDKASAWIIDPANDGLYRFANVAEGTFLTQADCQDEKA
ECCCCCHHEEECCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCC
SDVNAAPWVASRCQRWSVDASRDGWFRFANERSIKNLQAANCSSKKNTAVVAGENRVSEC
CCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEEEECCCCCCCC
TDWRIEPISHFAIVNAHSGRVVSAQQCDTKANANVVQYEYTGNACQQWHATSTSEGYYRL
CCCEECCCCEEEEEECCCCCEEEHHHCCCCCCCCEEEEEECCCHHHHCCCCCCCCCEEEE
QSNQLTANKQAQCLVSVEGNLQLGACDKDDSEWRTEFMPNGSLRVVSRKGGSSMKVAGES
ECCEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHCCCCCCEEEEEECCCCEEEECCCC
YANGDNIVEDVWKNTISQQFYFREVKTK
CCCCCHHHHHHHHHHHHHHHEEHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10657233 [H]