Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yceA [C]

Identifier: 120598696

GI number: 120598696

Start: 2164687

End: 2165691

Strand: Direct

Name: yceA [C]

Synonym: Sputw3181_1881

Alternate gene names: 120598696

Gene position: 2164687-2165691 (Clockwise)

Preceding gene: 120598694

Following gene: 120598697

Centisome position: 45.98

GC content: 43.48

Gene sequence:

>1005_bases
ATGACTAAAGTTGTTGTGTGTGCGTTATATAAGTTTGTGTCGTTGCCGCATTTTGAATCTATCCGAGCACCTTTGCTCGC
TATGATGGAACAGGCTGAGGTCAAAGGTACGCTGCTACTCGCAAGTGAAGGGATCAATGGCACGGTTGCTGGCAACCAAG
AGGCTATCGAAGCCTTATTAGCGTGGCTCAATAATCAAAATGGTCTAGACAATATTGTTTACAAGTTATCATTCGACGAT
GAAATGCCGTTTTACCGCACTAAAGTTAAACTGAAAAACGAAATTGTGACTATGGGTGTGGAAGGGATTGATCCACTAAA
AGTGGTTGGCACTTACGTTAAACCTAAGGATTGGAATGCGCTGATTTCTGATCCTGATGTGATTTTAGTCGATACTCGTA
ATGATTATGAGGTACAGATCGGAACCTTCAAAAATGCCATTAACCCTGTCACTGAAACCTTTAGAGAATTCCCAGAATAC
GTAAAGCAGAACCTTGATCCTGTCAAACATAAAAAGGTGGCGATGTTTTGTACAGGTGGCATTCGTTGCGAAAAGTCAAC
GGCCTATTTGAAGGAGCAAGGTTTTGAGGAGGTGTATCATCTTGAAGGCGGTATTCTTAAATACTTGGAGGAAGTCAAAC
AAGAAGAAAGCCTATGGGAAGGCGAGTGCTTTGTGTTTGATAATCGTGTTGCCGTTAACCATGAGTTGAAGAAAGGCCAG
TACGATCAATGCAATGCTTGCCGTATGCCGATCACTGAAGCCGAAAAACGCAGTCCTGCCTATGTGCAGGGTGTCAGTTG
TCCTCATTGTGTCGATAAAATTTCTGATGAGCAGCGCAAGCGTTTTGTCGAGCGCGAACGTCAAGTTAATCTCGCCAAGG
CAAGAAACGAAGCGCATATCGGTAGCGACGTAAATCAAGTGATTGAAGCGCGTCGAGAGAAGAAAGAAGCGCTACGTAAA
CTCGCCGCACAAAAAAATAAACTAAAGCAAACTGGCACAGTTTAA

Upstream 100 bases:

>100_bases
TCAGGTAAAATTTCGCGCTATTTTGCGATCTGTCGCAAATTCATCGTTTATTTTAAGTTCATGCACTGGAAATTAAGTTC
CAGCCAGCAAAGAGGGTGTT

Downstream 100 bases:

>100_bases
TGAGTGTACGACTATTAAGGTGAAAACCAATTGAGAGATGGCCCGACTTGTTCGGGCTATTTTTTTACTTCAGATTTGTA
TTTTTAGTATAAATTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTKVVVCALYKFVSLPHFESIRAPLLAMMEQAEVKGTLLLASEGINGTVAGNQEAIEALLAWLNNQNGLDNIVYKLSFDD
EMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPKDWNALISDPDVILVDTRNDYEVQIGTFKNAINPVTETFREFPEY
VKQNLDPVKHKKVAMFCTGGIRCEKSTAYLKEQGFEEVYHLEGGILKYLEEVKQEESLWEGECFVFDNRVAVNHELKKGQ
YDQCNACRMPITEAEKRSPAYVQGVSCPHCVDKISDEQRKRFVERERQVNLAKARNEAHIGSDVNQVIEARREKKEALRK
LAAQKNKLKQTGTV

Sequences:

>Translated_334_residues
MTKVVVCALYKFVSLPHFESIRAPLLAMMEQAEVKGTLLLASEGINGTVAGNQEAIEALLAWLNNQNGLDNIVYKLSFDD
EMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPKDWNALISDPDVILVDTRNDYEVQIGTFKNAINPVTETFREFPEY
VKQNLDPVKHKKVAMFCTGGIRCEKSTAYLKEQGFEEVYHLEGGILKYLEEVKQEESLWEGECFVFDNRVAVNHELKKGQ
YDQCNACRMPITEAEKRSPAYVQGVSCPHCVDKISDEQRKRFVERERQVNLAKARNEAHIGSDVNQVIEARREKKEALRK
LAAQKNKLKQTGTV
>Mature_333_residues
TKVVVCALYKFVSLPHFESIRAPLLAMMEQAEVKGTLLLASEGINGTVAGNQEAIEALLAWLNNQNGLDNIVYKLSFDDE
MPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPKDWNALISDPDVILVDTRNDYEVQIGTFKNAINPVTETFREFPEYV
KQNLDPVKHKKVAMFCTGGIRCEKSTAYLKEQGFEEVYHLEGGILKYLEEVKQEESLWEGECFVFDNRVAVNHELKKGQY
DQCNACRMPITEAEKRSPAYVQGVSCPHCVDKISDEQRKRFVERERQVNLAKARNEAHIGSDVNQVIEARREKKEALRKL
AAQKNKLKQTGTV

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=279, Percent_Identity=33.3333333333333, Blast_Score=136, Evalue=3e-32,
Organism=Escherichia coli, GI1787294, Length=304, Percent_Identity=30.2631578947368, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1881_SHESW (A1RJ71)

Other databases:

- EMBL:   CP000503
- RefSeq:   YP_963270.1
- ProteinModelPortal:   A1RJ71
- STRING:   A1RJ71
- GeneID:   4660248
- GenomeReviews:   CP000503_GR
- KEGG:   shw:Sputw3181_1881
- eggNOG:   COG1054
- HOGENOM:   HBG366219
- OMA:   IVHKLSF
- ProtClustDB:   PRK00142
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 37950; Mature: 37819

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50206 RHODANESE_3

Important sites: ACT_SITE 177-177

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVVVCALYKFVSLPHFESIRAPLLAMMEQAEVKGTLLLASEGINGTVAGNQEAIEALL
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHH
AWLNNQNGLDNIVYKLSFDDEMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPKDWNA
HHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCCC
LISDPDVILVDTRNDYEVQIGTFKNAINPVTETFREFPEYVKQNLDPVKHKKVAMFCTGG
EECCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCC
IRCEKSTAYLKEQGFEEVYHLEGGILKYLEEVKQEESLWEGECFVFDNRVAVNHELKKGQ
EEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECEEEECCHHCCCC
YDQCNACRMPITEAEKRSPAYVQGVSCPHCVDKISDEQRKRFVERERQVNLAKARNEAHI
CCCCCCCCCCCCHHHCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHC
GSDVNQVIEARREKKEALRKLAAQKNKLKQTGTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKVVVCALYKFVSLPHFESIRAPLLAMMEQAEVKGTLLLASEGINGTVAGNQEAIEALL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHHHH
AWLNNQNGLDNIVYKLSFDDEMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPKDWNA
HHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCCC
LISDPDVILVDTRNDYEVQIGTFKNAINPVTETFREFPEYVKQNLDPVKHKKVAMFCTGG
EECCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCC
IRCEKSTAYLKEQGFEEVYHLEGGILKYLEEVKQEESLWEGECFVFDNRVAVNHELKKGQ
EEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECEEEECCHHCCCC
YDQCNACRMPITEAEKRSPAYVQGVSCPHCVDKISDEQRKRFVERERQVNLAKARNEAHI
CCCCCCCCCCCCHHHCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHC
GSDVNQVIEARREKKEALRKLAAQKNKLKQTGTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA