Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yfiK [C]

Identifier: 120598693

GI number: 120598693

Start: 2161432

End: 2162058

Strand: Direct

Name: yfiK [C]

Synonym: Sputw3181_1878

Alternate gene names: 120598693

Gene position: 2161432-2162058 (Clockwise)

Preceding gene: 120598691

Following gene: 120598694

Centisome position: 45.91

GC content: 41.79

Gene sequence:

>627_bases
ATGAATATTGCATTTTTTTACGACACACAATTATGGAGTTTAATGACTTCGGCGGCGCTATTTTGTGCCACGATGACAAT
GACACCCGGCCCGAATAATATTCTATTGGCTAGCTCAGGTGCGCATTTTGGCGTATTACGGACTGTGCCACATATTGCGG
GGATCCGCTTAGGCTCGACCTCTTTGCATCTATCGGTATTGCTTGGTCTTGGTGCTTTGTTTGCAACAGTCCCCCTATTG
CATCAAGTGCTGAAATACTTCGCTTTAGCTTACTTGTTGTATTTAGCTTACAGATTAGTGACTTTACCAGTGCAAGAAAC
TTATCTAGATGATGGGCGAAAACCAATGACGCTAATAGAAGCTGCATTGTTTCAATGGATTAACCCTAAATCTTGGATGT
CGACAATTACCCTTTGTAGTGCTTTTACATTAAGTGGGGAGGGCTTTTGGTTAAGTGCTTTTCTCGGCGTATTAGTGTTT
AACTTAGTGGGATTTCCAGCATCATTTACTTGGGTATTGATGGGCGCAGCGATCAGTAAAAAACTCAATACCGCTAAACG
TAAGCGACACTTCAATTGGTTTATGGGTAGTTTACTTCTGGTGTCTTTACCGATGATTTTACGTTAG

Upstream 100 bases:

>100_bases
GTACCCATAACAATAAATCCATTGATCTCTAATATTCACCGTATATTATTTGTTGAATATTTTTATGTCAAACAATGTAT
GCATACAATTATGGGTAATT

Downstream 100 bases:

>100_bases
CTTAAATTTCAGAACCCTTAAATCCATAAATATTCTGGAAAACAAACTCGCGTAACGATTGGCTTTATGTCATAACCAAC
CTAATATTGATGAATTTTTT

Product: lysine exporter protein (LysE/YggA)

Products: NA

Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Transporter LysE Family; Transporter Protein; Translocator Protein LysE Family; RhtB Family Transporter; LysE Family Protein; Amino Acid Efflux Protein LysE Family; Amino Acid Efflux Protein; Transporter LysE Family Protein; Threonine Efflux Protein; Transmembrane Transporter Protein; Amino Acid Efflux Pump RhtB Family Protein; LysE Type Translocator Family; LOW QUALITY PROTEIN Lysine Exporter Protein LysE; Neutral Amino-Acid Efflux System; Transporter-LysE Family; Transmembrane Transporter Protein LysE Type Translocator; LysE Family Transporter

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNIAFFYDTQLWSLMTSAALFCATMTMTPGPNNILLASSGAHFGVLRTVPHIAGIRLGSTSLHLSVLLGLGALFATVPLL
HQVLKYFALAYLLYLAYRLVTLPVQETYLDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLSGEGFWLSAFLGVLVF
NLVGFPASFTWVLMGAAISKKLNTAKRKRHFNWFMGSLLLVSLPMILR

Sequences:

>Translated_208_residues
MNIAFFYDTQLWSLMTSAALFCATMTMTPGPNNILLASSGAHFGVLRTVPHIAGIRLGSTSLHLSVLLGLGALFATVPLL
HQVLKYFALAYLLYLAYRLVTLPVQETYLDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLSGEGFWLSAFLGVLVF
NLVGFPASFTWVLMGAAISKKLNTAKRKRHFNWFMGSLLLVSLPMILR
>Mature_208_residues
MNIAFFYDTQLWSLMTSAALFCATMTMTPGPNNILLASSGAHFGVLRTVPHIAGIRLGSTSLHLSVLLGLGALFATVPLL
HQVLKYFALAYLLYLAYRLVTLPVQETYLDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLSGEGFWLSAFLGVLVF
NLVGFPASFTWVLMGAAISKKLNTAKRKRHFNWFMGSLLLVSLPMILR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23043; Mature: 23043

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAFFYDTQLWSLMTSAALFCATMTMTPGPNNILLASSGAHFGVLRTVPHIAGIRLGST
CCEEEEEHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHCEEECCH
SLHLSVLLGLGALFATVPLLHQVLKYFALAYLLYLAYRLVTLPVQETYLDDGRKPMTLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
AALFQWINPKSWMSTITLCSAFTLSGEGFWLSAFLGVLVFNLVGFPASFTWVLMGAAISK
HHHHHHCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KLNTAKRKRHFNWFMGSLLLVSLPMILR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIAFFYDTQLWSLMTSAALFCATMTMTPGPNNILLASSGAHFGVLRTVPHIAGIRLGST
CCEEEEEHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHCEEECCH
SLHLSVLLGLGALFATVPLLHQVLKYFALAYLLYLAYRLVTLPVQETYLDDGRKPMTLIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
AALFQWINPKSWMSTITLCSAFTLSGEGFWLSAFLGVLVFNLVGFPASFTWVLMGAAISK
HHHHHHCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KLNTAKRKRHFNWFMGSLLLVSLPMILR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA