| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is nifP [H]
Identifier: 120598675
GI number: 120598675
Start: 2144042
End: 2144863
Strand: Direct
Name: nifP [H]
Synonym: Sputw3181_1860
Alternate gene names: 120598675
Gene position: 2144042-2144863 (Clockwise)
Preceding gene: 120598674
Following gene: 120598676
Centisome position: 45.54
GC content: 45.86
Gene sequence:
>822_bases ATGGGCGTGATAGCTAGGCTAAAAGAAGATATTGAATCTATTTATCACCGTGATCCAGCGGCGCGCAGTGCCTTTGAGAT CTTGGTTAACTATCCAGGAATGCATGCTATTTGGTTGCACAGGATAAGCCATAAATTATGGAAGGCAGATTGGCGCTTGA CAGCACGTTGTTTATCGACGTTTTCCCGTTGGCTGACGGGGGTTGAAATCCATCCCGGCGCAACCATAGGCCATCGGTTT TTTATCGATCATGGTATGGGGGTTGTGATCGGTGAAACCGCAGAGATTGGTGATGATTGTACTTTATACCATGGGGTAAC CTTAGGGGGAACGACTTGGCAGGCAGGGAAACGTCATCCAACCTTAGCCAATAACGTAGTGGTCGGTGCAGGGGCTAAGA TCCTTGGTCCTATTACTATGCATGATGGCGCACGCGTAGGCTCTAATTCAGTTGTTGTTAAAGATGTACCTAAGGATACC ACAGTAGTCGGTATTCCTGGGCGCGTTGTCGCAACCCCTTCACCTCAATCGAAGGAAAAATCTGAACGCCGTAGTGCTAT GGCAAAGAAATACGGTTTTGATGCCTATGCAGTTTCACCTGATAATCCTGATCCTGTCGCTAATGCCATAGGTCAAATGC TAGATCATATGCATTTAATGGATTCAAAAGTGCAAGAATTGTGTCAGGCAATACAACGTTTAGGTGGGGATGTCTGCACT GAAAAACTGCCAGAGCTTGATATGGGTGAGTTTAATGAGGCAGAAAAAGCGGCAGCGGATAAACGTCAAAGTTCATTAGA AGAGTTTGATCCTAGCATTTAA
Upstream 100 bases:
>100_bases ATATTCTTAGAGGGATCCTGACTTCCATCGATAAAGTGGTTAGCAATAAACAAAAATAGTTAACCCTACAATAGTCAAAA ATAATCGCGAAGGATAAACA
Downstream 100 bases:
>100_bases GCTTCGCTACAGATCGTGTTTGCCCAGAAGAAGTGCCAGTGCTGTTAATAAATCCACAGATTAGGGAATAGGTTTATATT TCACTCTCTTTGTGGTGTTT
Product: serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MGVIARLKEDIESIYHRDPAARSAFEILVNYPGMHAIWLHRISHKLWKADWRLTARCLSTFSRWLTGVEIHPGATIGHRF FIDHGMGVVIGETAEIGDDCTLYHGVTLGGTTWQAGKRHPTLANNVVVGAGAKILGPITMHDGARVGSNSVVVKDVPKDT TVVGIPGRVVATPSPQSKEKSERRSAMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQELCQAIQRLGGDVCT EKLPELDMGEFNEAEKAAADKRQSSLEEFDPSI
Sequences:
>Translated_273_residues MGVIARLKEDIESIYHRDPAARSAFEILVNYPGMHAIWLHRISHKLWKADWRLTARCLSTFSRWLTGVEIHPGATIGHRF FIDHGMGVVIGETAEIGDDCTLYHGVTLGGTTWQAGKRHPTLANNVVVGAGAKILGPITMHDGARVGSNSVVVKDVPKDT TVVGIPGRVVATPSPQSKEKSERRSAMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQELCQAIQRLGGDVCT EKLPELDMGEFNEAEKAAADKRQSSLEEFDPSI >Mature_272_residues GVIARLKEDIESIYHRDPAARSAFEILVNYPGMHAIWLHRISHKLWKADWRLTARCLSTFSRWLTGVEIHPGATIGHRFF IDHGMGVVIGETAEIGDDCTLYHGVTLGGTTWQAGKRHPTLANNVVVGAGAKILGPITMHDGARVGSNSVVVKDVPKDTT VVGIPGRVVATPSPQSKEKSERRSAMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQELCQAIQRLGGDVCTE KLPELDMGEFNEAEKAAADKRQSSLEEFDPSI
Specific function: Probable serine acetyltransferase required for optimizing the expression of nitrogenase activity. May be required to boost rates of synthesis or intracellular concentrations of cysteine or methionine [H]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=171, Percent_Identity=42.1052631578947, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1788371, Length=135, Percent_Identity=37.7777777777778, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 29818; Mature: 29687
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIARLKEDIESIYHRDPAARSAFEILVNYPGMHAIWLHRISHKLWKADWRLTARCLST CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSRWLTGVEIHPGATIGHRFFIDHGMGVVIGETAEIGDDCTLYHGVTLGGTTWQAGKRHP HHHHHCCCEECCCCCCCCEEEEECCCEEEEECCHHCCCCEEEEECEEECCCCCCCCCCCC TLANNVVVGAGAKILGPITMHDGARVGSNSVVVKDVPKDTTVVGIPGRVVATPSPQSKEK CHHCCEEEECCCHHCCCEEECCCCEECCCCEEEEECCCCCEEEECCCEEEECCCCCHHHH SERRSAMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQELCQAIQRLGGDVCT HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EKLPELDMGEFNEAEKAAADKRQSSLEEFDPSI HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GVIARLKEDIESIYHRDPAARSAFEILVNYPGMHAIWLHRISHKLWKADWRLTARCLST CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSRWLTGVEIHPGATIGHRFFIDHGMGVVIGETAEIGDDCTLYHGVTLGGTTWQAGKRHP HHHHHCCCEECCCCCCCCEEEEECCCEEEEECCHHCCCCEEEEECEEECCCCCCCCCCCC TLANNVVVGAGAKILGPITMHDGARVGSNSVVVKDVPKDTTVVGIPGRVVATPSPQSKEK CHHCCEEEECCCHHCCCEEECCCCEECCCCEEEEECCCCCEEEECCCEEEECCCCCHHHH SERRSAMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQELCQAIQRLGGDVCT HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EKLPELDMGEFNEAEKAAADKRQSSLEEFDPSI HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885524 [H]