Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598635

Identifier: 120598635

GI number: 120598635

Start: 2097449

End: 2097961

Strand: Direct

Name: 120598635

Synonym: Sputw3181_1819

Alternate gene names: NA

Gene position: 2097449-2097961 (Clockwise)

Preceding gene: 120598634

Following gene: 120598649

Centisome position: 44.55

GC content: 35.87

Gene sequence:

>513_bases
ATGGATACATTAATTAATTTTTTAAGACGAGCGAACGGTCAACTTGAAAGTGGTTGGTTATATCTTCCGGAAGAAGGAGC
ATGGAATCTTAATACACTCGGGTTGATAATCGATGATGACGAGCTAGATATCCATGAAGTCGATGAACAAGATGAGCCAC
TTATTGCGAAAGAAAAAGGATTAATTTCCACTCTTAATACAGGAACGATTGAAAGTATATTTTCTTTTGCTAAGAGTCTT
GATTTTGAGCTAACTGATGATTTTTTATTTGAGTCATTCCAATATTATTATGACTACGATGCGTTTTTACCTTATCCAGG
TTTCAAGCCCTTAGAACAAGAAGAATACCAAAGGAAAGTAGACAGAGATTTTTATGATTGTCTTGGTGAAGAAAGAAGTC
AGGTACAGTGCAAAAATGAAGAGTGCCAAAGAGGAGCAATAACGAGCAGTGCTTATTGCAGAGCCCACCATTTTGAAATG
GTTCAAAACAAACCGTTTCCTTTTATAGATTGA

Upstream 100 bases:

>100_bases
CCTTAAAGATGCTGGCTTCCGTGAGTAATCGCTTAACAAAGCCAGTCAGTAGGACGATCGCAAGCCTGCACCTCTGCTGG
CGGCGGTATCAAAGGTAAAT

Downstream 100 bases:

>100_bases
AATATAATCTTCAAGTGAGGCTGTCCATCATTCTGCGCCAAGTTAATTAGGCTGTTTATCAGTCTGTATTCGCCCCATGA
TCCCTCGGGGTGCTTTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MDTLINFLRRANGQLESGWLYLPEEGAWNLNTLGLIIDDDELDIHEVDEQDEPLIAKEKGLISTLNTGTIESIFSFAKSL
DFELTDDFLFESFQYYYDYDAFLPYPGFKPLEQEEYQRKVDRDFYDCLGEERSQVQCKNEECQRGAITSSAYCRAHHFEM
VQNKPFPFID

Sequences:

>Translated_170_residues
MDTLINFLRRANGQLESGWLYLPEEGAWNLNTLGLIIDDDELDIHEVDEQDEPLIAKEKGLISTLNTGTIESIFSFAKSL
DFELTDDFLFESFQYYYDYDAFLPYPGFKPLEQEEYQRKVDRDFYDCLGEERSQVQCKNEECQRGAITSSAYCRAHHFEM
VQNKPFPFID
>Mature_170_residues
MDTLINFLRRANGQLESGWLYLPEEGAWNLNTLGLIIDDDELDIHEVDEQDEPLIAKEKGLISTLNTGTIESIFSFAKSL
DFELTDDFLFESFQYYYDYDAFLPYPGFKPLEQEEYQRKVDRDFYDCLGEERSQVQCKNEECQRGAITSSAYCRAHHFEM
VQNKPFPFID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19914; Mature: 19914

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLINFLRRANGQLESGWLYLPEEGAWNLNTLGLIIDDDELDIHEVDEQDEPLIAKEKG
CHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCC
LISTLNTGTIESIFSFAKSLDFELTDDFLFESFQYYYDYDAFLPYPGFKPLEQEEYQRKV
CEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
DRDFYDCLGEERSQVQCKNEECQRGAITSSAYCRAHHFEMVQNKPFPFID
HHHHHHHHCCCHHHEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDTLINFLRRANGQLESGWLYLPEEGAWNLNTLGLIIDDDELDIHEVDEQDEPLIAKEKG
CHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCC
LISTLNTGTIESIFSFAKSLDFELTDDFLFESFQYYYDYDAFLPYPGFKPLEQEEYQRKV
CEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
DRDFYDCLGEERSQVQCKNEECQRGAITSSAYCRAHHFEMVQNKPFPFID
HHHHHHHHCCCHHHEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA