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The map label for this gene is 120598628

Identifier: 120598628

GI number: 120598628

Start: 2086425

End: 2087438

Strand: Direct

Name: 120598628

Synonym: Sputw3181_1812

Alternate gene names: NA

Gene position: 2086425-2087438 (Clockwise)

Preceding gene: 120598627

Following gene: 120598629

Centisome position: 44.31

GC content: 42.7

Gene sequence:

>1014_bases
ATGTCGTTTCGCATCCTTCACTGTGTTACTGCGCTCAGTCTCAGTTGTTTATTTAGTTCTTCTTTGTTTTCTGCGACATC
AGTTACGCCGCCATCTCAAATTCAACCTTTGGCTAGCTCATCACTAATATTAGACATTGCCGATACGGGTCAACGCTTAG
TCGCGGTGGGTGAGCGTGGGCATGTACTGGTTTATGATAACCATTGGCAACAAGTGATTACGCCTACATCGGTTCAGTTA
ACTAAAGTGTTTTTTATTAATAGCACATTAGGTTGGGCTGTTGGACATGACGCAACGATTTTGCATACACAGGATGGCGG
TCAAACATGGCAACTCCAAATGCAATCTAGCGAGGTTGAAAAGCCTTTTCTCGATATTCTGTTTTTAAATGAACGAGAAG
GTATGGCGATAGGTGCCTATGGATTGTTTTATCGTACTAGGGATGGTGGCGTTAATTGGCGTGCCGAGTTCCATGAAGAA
TTACTCGCCGAAGAGGATGTCGCTTATTTGGCTGAGTTAAAAGGTAGCGATGAAGCCGCCTATCTGGATGAGCGAGCTTC
TTTATTACCTCATTTTAACCGCATTATCGCTTTAAAAGATGGTCGCCTAATTCTAGTCGGAGAACTGGGTTTAGTGGCTT
CATCGGACGATAAGGGAATAACCTTCACCCGAACTAGTTTTGATTATGATGGTTCTATGTTTAATGCCATTGAAATGCGA
GATGCAATCTATGTGATGGGGCTGAGGGGAAATATATTTAAGACCGATTTGAGTTTGGAACAATGGCATGAAATTGAGAT
GCCAGTACAATCTTCAATCAATGGGGTTATGGCTATCTCAGATGAAACACTCTATTTAGTCGGCAATGCGGGGGTTGTGA
TACAGCTAAATAGTGATGACACCAGTAGCATAGTCACCCGTCGTCAAGGGGAAAATTTAGTTTCTATCGCAAAAGATAAT
CAAGGGAATATGTGGTTATCCGGCAGCCAAGGGCTGTTTATTCTTAAGCCATAA

Upstream 100 bases:

>100_bases
AAGCAAACTTTACCCCAGACGCCTTACGTCGTGAAGGTATTCGTTAATCGCCAAATATTAAGGGGCGCTAAGCGCCCCTC
ATTAGTTTAAGGAAGTTTGT

Downstream 100 bases:

>100_bases
AATTCTAGAACAACAATAATAGGGCCGAGAAGATGTTAGAAAAACTGGTCAACGGATTTGAATCATTTTTATTTCGCAAT
CGCGCATGGGTAGTTGGTAT

Product: BNR repeat-containing protein

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase; BNR Repeat Protein

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSFRILHCVTALSLSCLFSSSLFSATSVTPPSQIQPLASSSLILDIADTGQRLVAVGERGHVLVYDNHWQQVITPTSVQL
TKVFFINSTLGWAVGHDATILHTQDGGQTWQLQMQSSEVEKPFLDILFLNEREGMAIGAYGLFYRTRDGGVNWRAEFHEE
LLAEEDVAYLAELKGSDEAAYLDERASLLPHFNRIIALKDGRLILVGELGLVASSDDKGITFTRTSFDYDGSMFNAIEMR
DAIYVMGLRGNIFKTDLSLEQWHEIEMPVQSSINGVMAISDETLYLVGNAGVVIQLNSDDTSSIVTRRQGENLVSIAKDN
QGNMWLSGSQGLFILKP

Sequences:

>Translated_337_residues
MSFRILHCVTALSLSCLFSSSLFSATSVTPPSQIQPLASSSLILDIADTGQRLVAVGERGHVLVYDNHWQQVITPTSVQL
TKVFFINSTLGWAVGHDATILHTQDGGQTWQLQMQSSEVEKPFLDILFLNEREGMAIGAYGLFYRTRDGGVNWRAEFHEE
LLAEEDVAYLAELKGSDEAAYLDERASLLPHFNRIIALKDGRLILVGELGLVASSDDKGITFTRTSFDYDGSMFNAIEMR
DAIYVMGLRGNIFKTDLSLEQWHEIEMPVQSSINGVMAISDETLYLVGNAGVVIQLNSDDTSSIVTRRQGENLVSIAKDN
QGNMWLSGSQGLFILKP
>Mature_336_residues
SFRILHCVTALSLSCLFSSSLFSATSVTPPSQIQPLASSSLILDIADTGQRLVAVGERGHVLVYDNHWQQVITPTSVQLT
KVFFINSTLGWAVGHDATILHTQDGGQTWQLQMQSSEVEKPFLDILFLNEREGMAIGAYGLFYRTRDGGVNWRAEFHEEL
LAEEDVAYLAELKGSDEAAYLDERASLLPHFNRIIALKDGRLILVGELGLVASSDDKGITFTRTSFDYDGSMFNAIEMRD
AIYVMGLRGNIFKTDLSLEQWHEIEMPVQSSINGVMAISDETLYLVGNAGVVIQLNSDDTSSIVTRRQGENLVSIAKDNQ
GNMWLSGSQGLFILKP

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37231; Mature: 37099

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRILHCVTALSLSCLFSSSLFSATSVTPPSQIQPLASSSLILDIADTGQRLVAVGERG
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCCEEEEECCCC
HVLVYDNHWQQVITPTSVQLTKVFFINSTLGWAVGHDATILHTQDGGQTWQLQMQSSEVE
EEEEEECCCCEEECCCCEEEEEEEEEECCCCEEECCCEEEEEECCCCCEEEEEECCCCCC
KPFLDILFLNEREGMAIGAYGLFYRTRDGGVNWRAEFHEELLAEEDVAYLAELKGSDEAA
CCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCHH
YLDERASLLPHFNRIIALKDGRLILVGELGLVASSDDKGITFTRTSFDYDGSMFNAIEMR
HHHHHHHHCCCCEEEEEEECCCEEEEEECCEEECCCCCCEEEEEECCCCCCCEEEEEEEC
DAIYVMGLRGNIFKTDLSLEQWHEIEMPVQSSINGVMAISDETLYLVGNAGVVIQLNSDD
CEEEEEEECCCEEEECCCHHHHHEECCCHHHCCCEEEEECCCEEEEEECCEEEEEECCCC
TSSIVTRRQGENLVSIAKDNQGNMWLSGSQGLFILKP
CHHHHHHCCCCCEEEEEECCCCCEEEECCCCEEEECC
>Mature Secondary Structure 
SFRILHCVTALSLSCLFSSSLFSATSVTPPSQIQPLASSSLILDIADTGQRLVAVGERG
CEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCCEEEEECCCC
HVLVYDNHWQQVITPTSVQLTKVFFINSTLGWAVGHDATILHTQDGGQTWQLQMQSSEVE
EEEEEECCCCEEECCCCEEEEEEEEEECCCCEEECCCEEEEEECCCCCEEEEEECCCCCC
KPFLDILFLNEREGMAIGAYGLFYRTRDGGVNWRAEFHEELLAEEDVAYLAELKGSDEAA
CCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCHH
YLDERASLLPHFNRIIALKDGRLILVGELGLVASSDDKGITFTRTSFDYDGSMFNAIEMR
HHHHHHHHCCCCEEEEEEECCCEEEEEECCEEECCCCCCEEEEEECCCCCCCEEEEEEEC
DAIYVMGLRGNIFKTDLSLEQWHEIEMPVQSSINGVMAISDETLYLVGNAGVVIQLNSDD
CEEEEEEECCCEEEECCCHHHHHEECCCHHHCCCEEEEECCCEEEEEECCEEEEEECCCC
TSSIVTRRQGENLVSIAKDNQGNMWLSGSQGLFILKP
CHHHHHHCCCCCEEEEEECCCCCEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA