Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598626

Identifier: 120598626

GI number: 120598626

Start: 2082951

End: 2084993

Strand: Direct

Name: 120598626

Synonym: Sputw3181_1810

Alternate gene names: NA

Gene position: 2082951-2084993 (Clockwise)

Preceding gene: 120598625

Following gene: 120598627

Centisome position: 44.24

GC content: 43.42

Gene sequence:

>2043_bases
ATGAAAATGGTTAAAAATAGCTTTAACAAGTCGGCGCTTGCTTTGGGGGTGGCGTCGGCATTGAGTTTATTAACAGTGGC
AAGTGTTAATGCAGTCTCATTTGATTGGGGTGAGGTTAAGGGAACATTTGACTCAACTTGGACTGCTGGCGCGAGTTGGC
GTGTTGGAGACCGTGATTGGTCTGGTCAAATTGGTAAAGTGAATCAGCCTCAATTTGATTGGTCTAACTACAGCGCATTT
GGGAATACTAAGTATACCTCTACAGAGATCTGGGCTCAGCCAGGCTCTTATTCAAGTAACAACGATTTAAGTAATTTACT
TTATTCTCAGGGTGATACTACTTCTGAGATCTTCAAAGGCTTACATGAGTTATCACTTAAGTATAAAAACTATGGCCTAT
TTGCCCGCGGTATGTATTTTTACGATCGTAAATTAAACGACGGTAATTATGACTACAACGACCCGATAACAGGTAAAGCA
TTTGATCCTTGTGATGATAACCGAGCATCTGAAGTTCAATGTAAGGATATTCGTCTACTTGATGCTTTTGTTTACGGTAA
TTTCGATTTAAACGATGGTGCAAACCCTTTATCCATTCGTTTGGGTAACCAAGTGGTTTCATGGGGGGAAAGTACGTTAA
TTGCCCATGGGATCAGTGAAATTAACGCTGTTGATTTAAATATCCTTAACGCACCAGGCGCAGAGTTGAAAGAAGCTTTT
AGACCTCAAGGCATGGTGTGGGCATCCCTTGGGATCACTGATTCGTTAACAGTTGAAGCTTTCTATCAATACGATTGGCA
ACCCATTTGGGTTCCAACGCCAGGCTCCATTTTTGCGACCAATGATTTTGCGGGTTTTGGTGGTTATGCCCAAAATGCAC
AGCTTGGCTTTAACGCGAACCCAGATATTAATCTAGACTTCGTGATGCAAGAGTATGAACTCTTAGCAGGAATGATTGCC
AGTGGTCAGACTATCCCAACAGCACAATTGGTGTCTATGGGATTAGCTTACCCAACCAAAGTGACCTTAGTGCAGGATGA
ACAAGAGCCTAGCAACGGTGGGCAATACGGTATTAAGCTGGGTTATTATGCACCTTCACTCGGCGAGACCGAATTTGGGT
TCTATTTTATGAACTACCATAGCCGTAGACCATTGATCAGTGGTACAGCGGCTGATTTCAGTACAGGGGCTATCATAGCT
GATCTGGCAACGATAGGCCAAAACTCAGGCAATATTAATCGCGAACTGTTACTGAGTTTGAAGAGCTTTTCCAAGGCTCA
AATTGTCTACCCAGAAGATATTAAGCTGTATGGCTTTAGCTTTAACACCTTGATTGGTGATACTTCTGTCGCTGCGGAAA
TCGCCCACCGTCAAGATGAGCCGTTGCAGATTGATGATGTGGAATTGTTGTTTGCGGGTATGCCGCAGCAGTTAGCCAAT
GCTGGAATACGGCCTGATCTTGATGGTATTTCCCAGATAAAGGATGTTAAACCAGGAGAAACTGTTGATGGGTTTATTCG
CTTGGATACGACCCAAGCGCAAATGACCTTAACACACTTATTTGGCCCAACATTAGGTTTAGATAACTTAACTATGTTGG
CCGAAGTCGGTGGTGTGTGGATCCATGATATGCCTGGTTTTGATGAACTGCGTCTCAATGGACCTGGCACTTCGCGCTCT
GGTGGTAATCCAGATATGCCTGGAATTATTCAAGCACTGCACAATGGTCCAGAAACCAACCCATTCCCAACCGATTTTGC
TTGGGGATATCGCATTGTTGCTAAAGCTGAATTTAATAACCTATTTGCGGGTGTGAATATGTCTCCAAGGGTGATTTTCT
CCCATGACGTCGACGGTATCACACCAGATCCTATGTTCCTTTTTACGGAAGGACGTAAATCAATTGCACTAGGTCTTAAT
TTTGACTACCAAAACCGCTGGGGTGCAGATCTGTCCTATAACAACTTCTTTGGCGGTGTGGGTACGACGAATGCGATGGC
AGATCGTGATTATGTTTCATTCAATATCAAGTATTCGATCTAA

Upstream 100 bases:

>100_bases
AAGGGGATTAATTGCTGTAACAATGATGTTACCTGTGAGCTAACAAGATGTTGGTTGTAATTCCTAAAACAAAGAATCCA
GCAGGGTACGGAGAGCTAAA

Downstream 100 bases:

>100_bases
AAGGATTAAAACAATGAAGAAACTGACGATATTGGCGAGTGCAGTCATAATGGCACTTGCAGCGCCTGTTGTAATGGCGA
AAGTCTCAGAGGCTGATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MKMVKNSFNKSALALGVASALSLLTVASVNAVSFDWGEVKGTFDSTWTAGASWRVGDRDWSGQIGKVNQPQFDWSNYSAF
GNTKYTSTEIWAQPGSYSSNNDLSNLLYSQGDTTSEIFKGLHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKA
FDPCDDNRASEVQCKDIRLLDAFVYGNFDLNDGANPLSIRLGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF
RPQGMVWASLGITDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNANPDINLDFVMQEYELLAGMIA
SGQTIPTAQLVSMGLAYPTKVTLVQDEQEPSNGGQYGIKLGYYAPSLGETEFGFYFMNYHSRRPLISGTAADFSTGAIIA
DLATIGQNSGNINRELLLSLKSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAAEIAHRQDEPLQIDDVELLFAGMPQQLAN
AGIRPDLDGISQIKDVKPGETVDGFIRLDTTQAQMTLTHLFGPTLGLDNLTMLAEVGGVWIHDMPGFDELRLNGPGTSRS
GGNPDMPGIIQALHNGPETNPFPTDFAWGYRIVAKAEFNNLFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSIALGLN
FDYQNRWGADLSYNNFFGGVGTTNAMADRDYVSFNIKYSI

Sequences:

>Translated_680_residues
MKMVKNSFNKSALALGVASALSLLTVASVNAVSFDWGEVKGTFDSTWTAGASWRVGDRDWSGQIGKVNQPQFDWSNYSAF
GNTKYTSTEIWAQPGSYSSNNDLSNLLYSQGDTTSEIFKGLHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKA
FDPCDDNRASEVQCKDIRLLDAFVYGNFDLNDGANPLSIRLGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF
RPQGMVWASLGITDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNANPDINLDFVMQEYELLAGMIA
SGQTIPTAQLVSMGLAYPTKVTLVQDEQEPSNGGQYGIKLGYYAPSLGETEFGFYFMNYHSRRPLISGTAADFSTGAIIA
DLATIGQNSGNINRELLLSLKSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAAEIAHRQDEPLQIDDVELLFAGMPQQLAN
AGIRPDLDGISQIKDVKPGETVDGFIRLDTTQAQMTLTHLFGPTLGLDNLTMLAEVGGVWIHDMPGFDELRLNGPGTSRS
GGNPDMPGIIQALHNGPETNPFPTDFAWGYRIVAKAEFNNLFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSIALGLN
FDYQNRWGADLSYNNFFGGVGTTNAMADRDYVSFNIKYSI
>Mature_680_residues
MKMVKNSFNKSALALGVASALSLLTVASVNAVSFDWGEVKGTFDSTWTAGASWRVGDRDWSGQIGKVNQPQFDWSNYSAF
GNTKYTSTEIWAQPGSYSSNNDLSNLLYSQGDTTSEIFKGLHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKA
FDPCDDNRASEVQCKDIRLLDAFVYGNFDLNDGANPLSIRLGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF
RPQGMVWASLGITDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNANPDINLDFVMQEYELLAGMIA
SGQTIPTAQLVSMGLAYPTKVTLVQDEQEPSNGGQYGIKLGYYAPSLGETEFGFYFMNYHSRRPLISGTAADFSTGAIIA
DLATIGQNSGNINRELLLSLKSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAAEIAHRQDEPLQIDDVELLFAGMPQQLAN
AGIRPDLDGISQIKDVKPGETVDGFIRLDTTQAQMTLTHLFGPTLGLDNLTMLAEVGGVWIHDMPGFDELRLNGPGTSRS
GGNPDMPGIIQALHNGPETNPFPTDFAWGYRIVAKAEFNNLFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSIALGLN
FDYQNRWGADLSYNNFFGGVGTTNAMADRDYVSFNIKYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74537; Mature: 74537

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMVKNSFNKSALALGVASALSLLTVASVNAVSFDWGEVKGTFDSTWTAGASWRVGDRDW
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCCCCCCCEEECCCCCC
SGQIGKVNQPQFDWSNYSAFGNTKYTSTEIWAQPGSYSSNNDLSNLLYSQGDTTSEIFKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHH
LHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKAFDPCDDNRASEVQCKDIRLL
HHHHHEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEE
DAFVYGNFDLNDGANPLSIRLGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF
EEEEEECEECCCCCCEEEEEECCCEECCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHH
RPQGMVWASLGITDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNAN
CCCCEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCC
PDINLDFVMQEYELLAGMIASGQTIPTAQLVSMGLAYPTKVTLVQDEQEPSNGGQYGIKL
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEE
GYYAPSLGETEFGFYFMNYHSRRPLISGTAADFSTGAIIADLATIGQNSGNINRELLLSL
EEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
KSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAAEIAHRQDEPLQIDDVELLFAGMPQQLAN
HCCCCEEEECCCCEEEEEEEEHHEECCHHHHHHHHHCCCCCCEECCHHEEECCCCHHHHC
AGIRPDLDGISQIKDVKPGETVDGFIRLDTTQAQMTLTHLFGPTLGLDNLTMLAEVGGVW
CCCCCCCHHHHHHHCCCCCCCCCCEEEEECCHHHEEEHHHHCCCCCCCCHHHHHHHCCEE
IHDMPGFDELRLNGPGTSRSGGNPDMPGIIQALHNGPETNPFPTDFAWGYRIVAKAEFNN
EECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCC
LFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSIALGLNFDYQNRWGADLSYNNFFGGV
EEECCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
GTTNAMADRDYVSFNIKYSI
CCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKMVKNSFNKSALALGVASALSLLTVASVNAVSFDWGEVKGTFDSTWTAGASWRVGDRDW
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCCCCCCCEEECCCCCC
SGQIGKVNQPQFDWSNYSAFGNTKYTSTEIWAQPGSYSSNNDLSNLLYSQGDTTSEIFKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHH
LHELSLKYKNYGLFARGMYFYDRKLNDGNYDYNDPITGKAFDPCDDNRASEVQCKDIRLL
HHHHHEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEE
DAFVYGNFDLNDGANPLSIRLGNQVVSWGESTLIAHGISEINAVDLNILNAPGAELKEAF
EEEEEECEECCCCCCEEEEEECCCEECCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHH
RPQGMVWASLGITDSLTVEAFYQYDWQPIWVPTPGSIFATNDFAGFGGYAQNAQLGFNAN
CCCCEEEEECCCCCCEEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCC
PDINLDFVMQEYELLAGMIASGQTIPTAQLVSMGLAYPTKVTLVQDEQEPSNGGQYGIKL
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEE
GYYAPSLGETEFGFYFMNYHSRRPLISGTAADFSTGAIIADLATIGQNSGNINRELLLSL
EEECCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
KSFSKAQIVYPEDIKLYGFSFNTLIGDTSVAAEIAHRQDEPLQIDDVELLFAGMPQQLAN
HCCCCEEEECCCCEEEEEEEEHHEECCHHHHHHHHHCCCCCCEECCHHEEECCCCHHHHC
AGIRPDLDGISQIKDVKPGETVDGFIRLDTTQAQMTLTHLFGPTLGLDNLTMLAEVGGVW
CCCCCCCHHHHHHHCCCCCCCCCCEEEEECCHHHEEEHHHHCCCCCCCCHHHHHHHCCEE
IHDMPGFDELRLNGPGTSRSGGNPDMPGIIQALHNGPETNPFPTDFAWGYRIVAKAEFNN
EECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCC
LFAGVNMSPRVIFSHDVDGITPDPMFLFTEGRKSIALGLNFDYQNRWGADLSYNNFFGGV
EEECCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
GTTNAMADRDYVSFNIKYSI
CCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA