Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598519

Identifier: 120598519

GI number: 120598519

Start: 1959368

End: 1960114

Strand: Direct

Name: 120598519

Synonym: Sputw3181_1702

Alternate gene names: NA

Gene position: 1959368-1960114 (Clockwise)

Preceding gene: 120598518

Following gene: 120598520

Centisome position: 41.61

GC content: 42.3

Gene sequence:

>747_bases
GTGAATTTTAAACAGGTTCAGCAGTCTTTTATCGACTATATTCGCGACCCTGCTAAGCCATTACCGGCTGGGACATCCAT
TGAGCGAATGCAGGTTTACCGTGAATTATTTTTTAGTAATGTGATGGGGTTTGTCTCTAACGGTTTTCCGGTTTTGAAGA
GTTTATACACCGAGAATGATTGGTTGATTTTGGTACAAGATTTTTTTAGTCAGCACGACTGCCAGTCTCCACTTTTCATC
GATATCGCTGGGGAGTTCCTCGATTTTCTGCAACAGGAATACCAACTTAAAAATACTGATCCTGTGTTTATGTTGGAGTT
GGCTCATTATGAGTGGCTTGAACTTGTCGTTGCAGTCGCACAACAGGATGCTAAGGAAGTGGAGCTCAAGCCTGAAAATA
TTCAAGATCTCCCGCTGTGCCTTTCGTCTACAGCGAGGGTTGCGCAGTACCATTATCCAGTGCAACTTATTCGTGATGAC
TTTTGTCCTACAGCATGTCTTGATACGCCAGTATTTTTTTGTATTTACCAAGATGAAGATAGTGAAGTCCGTTTTTTGCA
ATTAAACCCACTAAGTGCCCAAGTGTTAGCCTATCTTGCTGAGCAAGGCTTGATGAGTTTTGATGGTATAGTCAATTGGT
TAACAATAACTTATCCGCAGATAACGCCTGAGGCTTTAGCACAAGGTTGTTTGCAGCTACTCGAACAGTTAGCCATCAAA
GGCATAGTGCGAACTCATCAGTCTTAG

Upstream 100 bases:

>100_bases
TTAATTTACCACCCACCTCTGAGCTATTACGCGAGATTGAACAAATTCATCAACATCAAGCGATTGCGTTTAATTCGGCT
GTTGCGAAAAGGAGTGCTTA

Downstream 100 bases:

>100_bases
CACGACTATTGATCAAAATAATTGCAATAACCCTACATAAAAAGGGTTTTTGTTGATTTGACAAACGGCTACAATGTCGC
CCGTTTTGTGATCTCCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNFKQVQQSFIDYIRDPAKPLPAGTSIERMQVYRELFFSNVMGFVSNGFPVLKSLYTENDWLILVQDFFSQHDCQSPLFI
DIAGEFLDFLQQEYQLKNTDPVFMLELAHYEWLELVVAVAQQDAKEVELKPENIQDLPLCLSSTARVAQYHYPVQLIRDD
FCPTACLDTPVFFCIYQDEDSEVRFLQLNPLSAQVLAYLAEQGLMSFDGIVNWLTITYPQITPEALAQGCLQLLEQLAIK
GIVRTHQS

Sequences:

>Translated_248_residues
MNFKQVQQSFIDYIRDPAKPLPAGTSIERMQVYRELFFSNVMGFVSNGFPVLKSLYTENDWLILVQDFFSQHDCQSPLFI
DIAGEFLDFLQQEYQLKNTDPVFMLELAHYEWLELVVAVAQQDAKEVELKPENIQDLPLCLSSTARVAQYHYPVQLIRDD
FCPTACLDTPVFFCIYQDEDSEVRFLQLNPLSAQVLAYLAEQGLMSFDGIVNWLTITYPQITPEALAQGCLQLLEQLAIK
GIVRTHQS
>Mature_248_residues
MNFKQVQQSFIDYIRDPAKPLPAGTSIERMQVYRELFFSNVMGFVSNGFPVLKSLYTENDWLILVQDFFSQHDCQSPLFI
DIAGEFLDFLQQEYQLKNTDPVFMLELAHYEWLELVVAVAQQDAKEVELKPENIQDLPLCLSSTARVAQYHYPVQLIRDD
FCPTACLDTPVFFCIYQDEDSEVRFLQLNPLSAQVLAYLAEQGLMSFDGIVNWLTITYPQITPEALAQGCLQLLEQLAIK
GIVRTHQS

Specific function: Unknown

COG id: COG3219

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28506; Mature: 28506

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKQVQQSFIDYIRDPAKPLPAGTSIERMQVYRELFFSNVMGFVSNGFPVLKSLYTEND
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
WLILVQDFFSQHDCQSPLFIDIAGEFLDFLQQEYQLKNTDPVFMLELAHYEWLELVVAVA
CEEEHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
QQDAKEVELKPENIQDLPLCLSSTARVAQYHYPVQLIRDDFCPTACLDTPVFFCIYQDED
HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCEEEEEEECCC
SEVRFLQLNPLSAQVLAYLAEQGLMSFDGIVNWLTITYPQITPEALAQGCLQLLEQLAIK
CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH
GIVRTHQS
HHHHHCCC
>Mature Secondary Structure
MNFKQVQQSFIDYIRDPAKPLPAGTSIERMQVYRELFFSNVMGFVSNGFPVLKSLYTEND
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
WLILVQDFFSQHDCQSPLFIDIAGEFLDFLQQEYQLKNTDPVFMLELAHYEWLELVVAVA
CEEEHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHH
QQDAKEVELKPENIQDLPLCLSSTARVAQYHYPVQLIRDDFCPTACLDTPVFFCIYQDED
HCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCEEEEEEECCC
SEVRFLQLNPLSAQVLAYLAEQGLMSFDGIVNWLTITYPQITPEALAQGCLQLLEQLAIK
CCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH
GIVRTHQS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA