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The map label for this gene is 120598379

Identifier: 120598379

GI number: 120598379

Start: 1776989

End: 1777777

Strand: Direct

Name: 120598379

Synonym: Sputw3181_1561

Alternate gene names: NA

Gene position: 1776989-1777777 (Clockwise)

Preceding gene: 120598378

Following gene: 120598381

Centisome position: 37.74

GC content: 51.46

Gene sequence:

>789_bases
ATGTTGCCTAGCTCCCAGCCGATGACTGACAACGAGCAAGTGACTAATACCGAAGTAACGAGTACCGAAGTAACGAGTGC
AGAAATGTCGAGTGCTGAATTTGCCTGTGAGCAAACGCTCGATACCAGCGCGGTATTTATCGGCTTAGTGAATCCTAAAA
CGCCCGTTAACGTCGGTGGCATTATGCGCGCATCAGGTTGTTATGGCGTCAATGGCGTATTTTATACCGGCAGGCGCTAC
GAGTTAGCCGCGCGTTCGGGCGCTGTGCAATACCATGTCGATACTAAAGATGCTGGCGAGCGCATTCCGCTCACGGGCGT
CACTTCATTGTTAGCCGCGATTCCGGCGGACACTCAGCTTATCTGTGTCGATTTGGTCGTGGGCGCAACGCCGCTGCCGG
ATTTTGTCCATCCCGCAAAAGCCTTTTATGTGTTTGGTCCTGAAGATGGCACCATTGGCCAAGAGATTATCGATAAAGCC
GATGCCGTAGTGTATGTGCCTACGGTCGGATGTATGAATCTTGCGGCTTCGGTCAATGTGCTGTTATACGACAGATTGGC
CAAATCCCATCGCGTGGCTGCAAGCCTGACATCGAGCCTAGCATCTGGTCTACCTTCGAACCTAAGTGGCGATGCGCTTA
TTCGTCAGAGCCGCGATAATAACAATCGTACTCGGGTGAAAGTGGCGAGAGAATCGAGAAAGCCCCGACATATTGAGGCT
AGTTGTGTAGAGCCTAGCTGTCTTGAACCTAGCAGCAGTGATAACACTATGGTTGTTACTGCCGCTTAA

Upstream 100 bases:

>100_bases
GACTGTCTAGCACTCGCGCGCCAAGAATTAAACGATGCCGATTATGCCTTGGTTGAACAGGCATGGGCACAGCTGCAGGC
AAAGATTATAGGCGAATTGG

Downstream 100 bases:

>100_bases
GTGGTTTACAGAAAATAATAAAAAAGGGATAAAGCCAAGGCTTAATCCCTTTTTTATTTGTACAGGCGATGGCAAAGCTA
GAGGGATTTTCCCTTGAGTA

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; Cold-Shock RNA Methyltransferase; rRNA Methylase; TrmH Family RNA Methyltransferase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; SpoU Class RRNA Methylase

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLPSSQPMTDNEQVTNTEVTSTEVTSAEMSSAEFACEQTLDTSAVFIGLVNPKTPVNVGGIMRASGCYGVNGVFYTGRRY
ELAARSGAVQYHVDTKDAGERIPLTGVTSLLAAIPADTQLICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKA
DAVVYVPTVGCMNLAASVNVLLYDRLAKSHRVAASLTSSLASGLPSNLSGDALIRQSRDNNNRTRVKVARESRKPRHIEA
SCVEPSCLEPSSSDNTMVVTAA

Sequences:

>Translated_262_residues
MLPSSQPMTDNEQVTNTEVTSTEVTSAEMSSAEFACEQTLDTSAVFIGLVNPKTPVNVGGIMRASGCYGVNGVFYTGRRY
ELAARSGAVQYHVDTKDAGERIPLTGVTSLLAAIPADTQLICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKA
DAVVYVPTVGCMNLAASVNVLLYDRLAKSHRVAASLTSSLASGLPSNLSGDALIRQSRDNNNRTRVKVARESRKPRHIEA
SCVEPSCLEPSSSDNTMVVTAA
>Mature_262_residues
MLPSSQPMTDNEQVTNTEVTSTEVTSAEMSSAEFACEQTLDTSAVFIGLVNPKTPVNVGGIMRASGCYGVNGVFYTGRRY
ELAARSGAVQYHVDTKDAGERIPLTGVTSLLAAIPADTQLICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKA
DAVVYVPTVGCMNLAASVNVLLYDRLAKSHRVAASLTSSLASGLPSNLSGDALIRQSRDNNNRTRVKVARESRKPRHIEA
SCVEPSCLEPSSSDNTMVVTAA

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27754; Mature: 27754

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSSQPMTDNEQVTNTEVTSTEVTSAEMSSAEFACEQTLDTSAVFIGLVNPKTPVNVGG
CCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
IMRASGCYGVNGVFYTGRRYELAARSGAVQYHVDTKDAGERIPLTGVTSLLAAIPADTQL
EEEECCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
ICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKADAVVYVPTVGCMNLAASVNV
EEEEEEECCCCCCHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHH
LLYDRLAKSHRVAASLTSSLASGLPSNLSGDALIRQSRDNNNRTRVKVARESRKPRHIEA
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEHHCCCCCCEEE
SCVEPSCLEPSSSDNTMVVTAA
ECCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLPSSQPMTDNEQVTNTEVTSTEVTSAEMSSAEFACEQTLDTSAVFIGLVNPKTPVNVGG
CCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
IMRASGCYGVNGVFYTGRRYELAARSGAVQYHVDTKDAGERIPLTGVTSLLAAIPADTQL
EEEECCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
ICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKADAVVYVPTVGCMNLAASVNV
EEEEEEECCCCCCHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHH
LLYDRLAKSHRVAASLTSSLASGLPSNLSGDALIRQSRDNNNRTRVKVARESRKPRHIEA
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEHHCCCCCCEEE
SCVEPSCLEPSSSDNTMVVTAA
ECCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA