| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yfcL [C]
Identifier: 120598378
GI number: 120598378
Start: 1776715
End: 1776999
Strand: Direct
Name: yfcL [C]
Synonym: Sputw3181_1560
Alternate gene names: 120598378
Gene position: 1776715-1776999 (Clockwise)
Preceding gene: 120598377
Following gene: 120598379
Centisome position: 37.74
GC content: 48.42
Gene sequence:
>285_bases ATGTTAGAGCATTACGAAGACGCATTAGAACAGTGGATCGCCAGTGTAGTCAGCCATGGTGATGACGATGCTTTGTTTGC CTGTGGCTACTTACAGGGCCATGTGGCCGTAGTGTTATCCCAATTGGAAGCACAGGGTGAAACGGATCTTGATGCGTTAA TGCTAAAAATGACCGACTGTCTAGCACTCGCGCGCCAAGAATTAAACGATGCCGATTATGCCTTGGTTGAACAGGCATGG GCACAGCTGCAGGCAAAGATTATAGGCGAATTGGATGTTGCCTAG
Upstream 100 bases:
>100_bases ACGGGCTACCATGATTACGTTATGTATCAGGTGGCCAATCCAGATTTATTGGTCGCAGCAGATGTGTCGGCCAATCCAGT ATTAATGGAGAGTTAGACCC
Downstream 100 bases:
>100_bases CTCCCAGCCGATGACTGACAACGAGCAAGTGACTAATACCGAAGTAACGAGTACCGAAGTAACGAGTGCAGAAATGTCGA GTGCTGAATTTGCCTGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MLEHYEDALEQWIASVVSHGDDDALFACGYLQGHVAVVLSQLEAQGETDLDALMLKMTDCLALARQELNDADYALVEQAW AQLQAKIIGELDVA
Sequences:
>Translated_94_residues MLEHYEDALEQWIASVVSHGDDDALFACGYLQGHVAVVLSQLEAQGETDLDALMLKMTDCLALARQELNDADYALVEQAW AQLQAKIIGELDVA >Mature_94_residues MLEHYEDALEQWIASVVSHGDDDALFACGYLQGHVAVVLSQLEAQGETDLDALMLKMTDCLALARQELNDADYALVEQAW AQLQAKIIGELDVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10320; Mature: 10320
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEHYEDALEQWIASVVSHGDDDALFACGYLQGHVAVVLSQLEAQGETDLDALMLKMTDC CCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LALARQELNDADYALVEQAWAQLQAKIIGELDVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLEHYEDALEQWIASVVSHGDDDALFACGYLQGHVAVVLSQLEAQGETDLDALMLKMTDC CCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LALARQELNDADYALVEQAWAQLQAKIIGELDVA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA