| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is surE
Identifier: 120598083
GI number: 120598083
Start: 1432483
End: 1433232
Strand: Direct
Name: surE
Synonym: Sputw3181_1260
Alternate gene names: 120598083
Gene position: 1432483-1433232 (Clockwise)
Preceding gene: 120598082
Following gene: 120598084
Centisome position: 30.42
GC content: 44.93
Gene sequence:
>750_bases ATGATCCGCATTCTTGTTAGTAATGATGATGGTGTAAATGCTCCTGGCATCAAAGCCTTAACAGAAGCACTCGTTGAAAT AGCCAACGTGATGACAGTCGCGCCTGATCGTAATTGTTCGGGGGCCAGTAACTCACTAACCTTGACTAATCCATTAAGAA TTAATAGGTTAGATAATGGTTATATTTCTGTACATGGTACGCCGACAGATTGTGTTCACTTAGCTATCCGCGAGCTCTGT GATGGTGAACCCGATATGGTCGTTTCTGGCATTAATGCCGGTGCAAATATGGGTGATGATACCTTGTATTCTGGGACCGT CGCTGCGGCAATGGAAGGGCGATTTTTAGGCTTTCCAGCAGTGGCTATTTCTCTCAATGGCCGAGAGTTTAAGCATTATC AATCTGCGGCTGTTTATGCACGGCGCATCGTGCAGGGACTTTTATTACACCCATTAGCGAGCGATCAAATTTTAAATATC AATGTACCAGATTTACCGCTTGATGAGATTAAAGGGATTAGAGTGACTCGGCTTGGCGCAAGGCATAAAGCTGAAGGCAT AGTGCGGACAAAAGATCCTGCGGGGCGAGAGATTTTTTGGCTCGGCCCACCAGGTCTTGAACAAGATGCTACCGAAGGGA CAGATTTTCATGCAGTTGCCAATGGGTATGTGTCAATTACCCCTTTGACAGTTGATCTCACAGCCTACAGACAATTATCG GTATTGCAGAATTGGGTAGATAAAATATGA
Upstream 100 bases:
>100_bases TTAGGGAACTGGTTAATTATCAGGATGTAAAAGAGCAGCAGTGGCAAGCAACAGTTACGTCAGAGGCTAACGCTGTTAAC GGTAGTGATGACGCTGCATC
Downstream 100 bases:
>100_bases CTCGAGTTGCCTTAACATCGGCGGTGAATCTCGCTAAAAAGCTTTCTGATGCGGGGATCCGTAATCAAGCCGTGTTAAAG GCGATATCGCAAACCCCGCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIRILVSNDDGVNAPGIKALTEALVEIANVMTVAPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELC DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGREFKHYQSAAVYARRIVQGLLLHPLASDQILNI NVPDLPLDEIKGIRVTRLGARHKAEGIVRTKDPAGREIFWLGPPGLEQDATEGTDFHAVANGYVSITPLTVDLTAYRQLS VLQNWVDKI
Sequences:
>Translated_249_residues MIRILVSNDDGVNAPGIKALTEALVEIANVMTVAPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELC DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGREFKHYQSAAVYARRIVQGLLLHPLASDQILNI NVPDLPLDEIKGIRVTRLGARHKAEGIVRTKDPAGREIFWLGPPGLEQDATEGTDFHAVANGYVSITPLTVDLTAYRQLS VLQNWVDKI >Mature_249_residues MIRILVSNDDGVNAPGIKALTEALVEIANVMTVAPDRNCSGASNSLTLTNPLRINRLDNGYISVHGTPTDCVHLAIRELC DGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPAVAISLNGREFKHYQSAAVYARRIVQGLLLHPLASDQILNI NVPDLPLDEIKGIRVTRLGARHKAEGIVRTKDPAGREIFWLGPPGLEQDATEGTDFHAVANGYVSITPLTVDLTAYRQLS VLQNWVDKI
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=249, Percent_Identity=59.4377510040161, Blast_Score=290, Evalue=8e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 26780; Mature: 26780
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILVSNDDGVNAPGIKALTEALVEIANVMTVAPDRNCSGASNSLTLTNPLRINRLDNG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCEEEEEECCC YISVHGTPTDCVHLAIRELCDGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPA EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEEHHCCCEECCCE VAISLNGREFKHYQSAAVYARRIVQGLLLHPLASDQILNINVPDLPLDEIKGIRVTRLGA EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCEEEEECCC RHKAEGIVRTKDPAGREIFWLGPPGLEQDATEGTDFHAVANGYVSITPLTVDLTAYRQLS CHHCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEEEEEHHHHHHHH VLQNWVDKI HHHHHHHCC >Mature Secondary Structure MIRILVSNDDGVNAPGIKALTEALVEIANVMTVAPDRNCSGASNSLTLTNPLRINRLDNG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCEEEEEECCC YISVHGTPTDCVHLAIRELCDGEPDMVVSGINAGANMGDDTLYSGTVAAAMEGRFLGFPA EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCEEEEHHCCCEECCCE VAISLNGREFKHYQSAAVYARRIVQGLLLHPLASDQILNINVPDLPLDEIKGIRVTRLGA EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCEEEEECCC RHKAEGIVRTKDPAGREIFWLGPPGLEQDATEGTDFHAVANGYVSITPLTVDLTAYRQLS CHHCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEEEEEHHHHHHHH VLQNWVDKI HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA