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The map label for this gene is 120597945

Identifier: 120597945

GI number: 120597945

Start: 1265548

End: 1267053

Strand: Direct

Name: 120597945

Synonym: Sputw3181_1116

Alternate gene names: NA

Gene position: 1265548-1267053 (Clockwise)

Preceding gene: 120597944

Following gene: 120597946

Centisome position: 26.88

GC content: 52.59

Gene sequence:

>1506_bases
GTGTCGGGCAAACCCATCACAGATCAACAAATCAGGTTATATGTGAATGAACGTAAACAAGGTCAAACCCAGCTTGCCGC
TTCGGCAAAGTCTGGTTTATCAGAGCGATCAGGTCGCCGCATAGACAGCGGTGAACTGAACACAGAACCAACCCCCAAGC
GTCAATGGCGCACTCGCAAAGACCCGCTTGCTGAGGTCTGGTCATCGGTGCTGGTACCACTACTCGAAGCGAACCCTGAA
CTATTGCCGCTCACGTTGTTTGAATACCTTCACGACAACTACCCCAATCAGTATGACAACACCGTACTGCGCACGTTGCA
GCGACGTGTCAAAGCATGGAAGGTCAAACATGGCCCCGCAAAGGAAGTCATGTTCCGCCAAACTAAAGTGCCTGGGCGTT
TGGGTTTATCGGACTTCACGCTCTTGAAAGGGGTTACGATTACAATACTTGGGCAGGTATTTTGCCATTTGCTATACCAC
TATCGCCTTGCCTTTAGCGGCTGGACGTACGCCAAAGTCATTTGCGGTGGTGAAAGCTATACCGCCTTGTCTACAGGGCT
TCAGAATGCCTTATGGCGCAGTGGTGGCGCACCCCTTGAACACCGCACCGACAGCTTGAGTGCCGCCTTTAACAATCTGG
CCGAGAAGGAACAGCTTACCGTTCGGTACGACGCCTTATGCCACCACTATCAACTCAAAGGCAGTCGTAACAACCCCGGC
AAGAGCCATGAGAACGGTACAATAGAAGCGGCACACGGGCATTTAAAGCGACGTATGACTCAGGCCTTGCTGCTGCGAGG
CGATACTGATTTTACGTCCCTTGAGGCCTATCAAGCCTTCGTGGATGGTATTGTCACCAAGATTAACCAGCAATGCCGCA
CCCGCTTTGAACAAGAGCGGCCGTTATTGCAGACACTGCCAAAACGGCGCACTCATGATTATGCGGAGCACAGTGTTCTG
ATTAGCAGCAGTAGCAGCTTTGACCTCAAACGGGTGACCTATACCGTACCGTCTCGCTTTATCGGCGAGCGGCTGTATGT
TCAGCTGTATGACGAGCGCTTGGATCTGTTCAGTGGGCATGAGCAGATACTCAGCTTACCGCGTGTTTATGCCACCACAA
CCCAGCGCGGACGCAGTGTCGATTATCGCCATGTTATCGACTCCTTGGTTAAAAAGCCGGGGGCCTTCCGTTACTCGCAG
CTGCGCGATGACTTATTACCCACCCCGGACTACCACCGTATCTGGCAGTATGTTGACGGCACACTGAATCCCCATGATGC
CTGCCGTTACATCGTGCGCCTGCTGCACTTGGCCGCGACAGCTCAGTGCCAAGATAGCCTTGGTCGTTACGTACTCAAAA
GCATTGAGGGGGGTGAATTACCCAGCAACTTACAGTGCAATAAGCGCTTTAGTACAGACACGGCCGTGATTCCACTCATT
ACGGCAAAGCAGCACCTGCTGGCTGATTACGATCAGCTGTTATGTGTGGAGGTGCAACATGGCTGA

Upstream 100 bases:

>100_bases
CTAATGAATATTGAACGACAATTAACTTGTCCGGTCGGCGACAACTATGTTGGCCGGTTGATCTGATACCGTCCGTCACG
GATTCCATTAGGAGATAACC

Downstream 100 bases:

>100_bases
TCTTGCCTCCCTCCCGATTCTCTTGAAGGAATTAAAGTTAAGTAGCTTCGCCCAGCACTGGGAAGGCCTTGCACAAAAGG
CGCTGGATGAACAATGGTTA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSGKPITDQQIRLYVNERKQGQTQLAASAKSGLSERSGRRIDSGELNTEPTPKRQWRTRKDPLAEVWSSVLVPLLEANPE
LLPLTLFEYLHDNYPNQYDNTVLRTLQRRVKAWKVKHGPAKEVMFRQTKVPGRLGLSDFTLLKGVTITILGQVFCHLLYH
YRLAFSGWTYAKVICGGESYTALSTGLQNALWRSGGAPLEHRTDSLSAAFNNLAEKEQLTVRYDALCHHYQLKGSRNNPG
KSHENGTIEAAHGHLKRRMTQALLLRGDTDFTSLEAYQAFVDGIVTKINQQCRTRFEQERPLLQTLPKRRTHDYAEHSVL
ISSSSSFDLKRVTYTVPSRFIGERLYVQLYDERLDLFSGHEQILSLPRVYATTTQRGRSVDYRHVIDSLVKKPGAFRYSQ
LRDDLLPTPDYHRIWQYVDGTLNPHDACRYIVRLLHLAATAQCQDSLGRYVLKSIEGGELPSNLQCNKRFSTDTAVIPLI
TAKQHLLADYDQLLCVEVQHG

Sequences:

>Translated_501_residues
MSGKPITDQQIRLYVNERKQGQTQLAASAKSGLSERSGRRIDSGELNTEPTPKRQWRTRKDPLAEVWSSVLVPLLEANPE
LLPLTLFEYLHDNYPNQYDNTVLRTLQRRVKAWKVKHGPAKEVMFRQTKVPGRLGLSDFTLLKGVTITILGQVFCHLLYH
YRLAFSGWTYAKVICGGESYTALSTGLQNALWRSGGAPLEHRTDSLSAAFNNLAEKEQLTVRYDALCHHYQLKGSRNNPG
KSHENGTIEAAHGHLKRRMTQALLLRGDTDFTSLEAYQAFVDGIVTKINQQCRTRFEQERPLLQTLPKRRTHDYAEHSVL
ISSSSSFDLKRVTYTVPSRFIGERLYVQLYDERLDLFSGHEQILSLPRVYATTTQRGRSVDYRHVIDSLVKKPGAFRYSQ
LRDDLLPTPDYHRIWQYVDGTLNPHDACRYIVRLLHLAATAQCQDSLGRYVLKSIEGGELPSNLQCNKRFSTDTAVIPLI
TAKQHLLADYDQLLCVEVQHG
>Mature_500_residues
SGKPITDQQIRLYVNERKQGQTQLAASAKSGLSERSGRRIDSGELNTEPTPKRQWRTRKDPLAEVWSSVLVPLLEANPEL
LPLTLFEYLHDNYPNQYDNTVLRTLQRRVKAWKVKHGPAKEVMFRQTKVPGRLGLSDFTLLKGVTITILGQVFCHLLYHY
RLAFSGWTYAKVICGGESYTALSTGLQNALWRSGGAPLEHRTDSLSAAFNNLAEKEQLTVRYDALCHHYQLKGSRNNPGK
SHENGTIEAAHGHLKRRMTQALLLRGDTDFTSLEAYQAFVDGIVTKINQQCRTRFEQERPLLQTLPKRRTHDYAEHSVLI
SSSSSFDLKRVTYTVPSRFIGERLYVQLYDERLDLFSGHEQILSLPRVYATTTQRGRSVDYRHVIDSLVKKPGAFRYSQL
RDDLLPTPDYHRIWQYVDGTLNPHDACRYIVRLLHLAATAQCQDSLGRYVLKSIEGGELPSNLQCNKRFSTDTAVIPLIT
AKQHLLADYDQLLCVEVQHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57120; Mature: 56988

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKPITDQQIRLYVNERKQGQTQLAASAKSGLSERSGRRIDSGELNTEPTPKRQWRTRK
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHCCCC
DPLAEVWSSVLVPLLEANPELLPLTLFEYLHDNYPNQYDNTVLRTLQRRVKAWKVKHGPA
CHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
KEVMFRQTKVPGRLGLSDFTLLKGVTITILGQVFCHLLYHYRLAFSGWTYAKVICGGESY
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
TALSTGLQNALWRSGGAPLEHRTDSLSAAFNNLAEKEQLTVRYDALCHHYQLKGSRNNPG
HHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
KSHENGTIEAAHGHLKRRMTQALLLRGDTDFTSLEAYQAFVDGIVTKINQQCRTRFEQER
CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLLQTLPKRRTHDYAEHSVLISSSSSFDLKRVTYTVPSRFIGERLYVQLYDERLDLFSGH
CHHHHCCHHHCCCHHHCEEEEECCCCCCEEHEEECCCHHHHHHHHHHHHHHHHHHHHCCC
EQILSLPRVYATTTQRGRSVDYRHVIDSLVKKPGAFRYSQLRDDLLPTPDYHRIWQYVDG
HHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC
TLNPHDACRYIVRLLHLAATAQCQDSLGRYVLKSIEGGELPSNLQCNKRFSTDTAVIPLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEH
TAKQHLLADYDQLLCVEVQHG
HHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
SGKPITDQQIRLYVNERKQGQTQLAASAKSGLSERSGRRIDSGELNTEPTPKRQWRTRK
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHCCCC
DPLAEVWSSVLVPLLEANPELLPLTLFEYLHDNYPNQYDNTVLRTLQRRVKAWKVKHGPA
CHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
KEVMFRQTKVPGRLGLSDFTLLKGVTITILGQVFCHLLYHYRLAFSGWTYAKVICGGESY
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
TALSTGLQNALWRSGGAPLEHRTDSLSAAFNNLAEKEQLTVRYDALCHHYQLKGSRNNPG
HHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
KSHENGTIEAAHGHLKRRMTQALLLRGDTDFTSLEAYQAFVDGIVTKINQQCRTRFEQER
CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLLQTLPKRRTHDYAEHSVLISSSSSFDLKRVTYTVPSRFIGERLYVQLYDERLDLFSGH
CHHHHCCHHHCCCHHHCEEEEECCCCCCEEHEEECCCHHHHHHHHHHHHHHHHHHHHCCC
EQILSLPRVYATTTQRGRSVDYRHVIDSLVKKPGAFRYSQLRDDLLPTPDYHRIWQYVDG
HHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC
TLNPHDACRYIVRLLHLAATAQCQDSLGRYVLKSIEGGELPSNLQCNKRFSTDTAVIPLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEH
TAKQHLLADYDQLLCVEVQHG
HHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]