Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is ybeL [H]

Identifier: 120597871

GI number: 120597871

Start: 1185982

End: 1186482

Strand: Direct

Name: ybeL [H]

Synonym: Sputw3181_1041

Alternate gene names: 120597871

Gene position: 1185982-1186482 (Clockwise)

Preceding gene: 120597856

Following gene: 120597880

Centisome position: 25.19

GC content: 41.12

Gene sequence:

>501_bases
ATGAATGAGAGAAGTGGCGAACTACTAGGACTGTACCAAGCCTTAATTACCGAGGTGAAATCGCAATTTGCAGAAGATAA
CACGCTGACTGCAAAGAATTTATTTAAATCTGTCACACAAGGTAAGGAGTTTTTGCGTCTAAAAGAACAGGCCAAAGAAG
ATGAGCTTGCTTTGGTGGAACAATTTTTAAAGCGTGATATTGCCAGCTTTCTTCGAGAACAAAATGCCGATAGTCTCAGC
CATAGTCCCAGTTTAATCGTGCTGGAAAATACACTCTGGCATTGGTTAAGTGAGATTACTGATCGTAGCCAAGTGGAATG
GCATGAGTTAACACAGGATTTTAAACACCACGGTTATTACCAGAGCGGTGATATTGTTAATCAAGGTATTATGGTCTGCA
CCAATTGTGGCCATGAAATGAGCATCGAATTTCCCAGCGAAATTCCAGATTGTCCTGAATGTGATAATGAAGAATTTACC
CGCGAGCCGCTAACACCTTAA

Upstream 100 bases:

>100_bases
CCTATTTATTTGATCTAACGCCATATCGGCGCGAATAAGATCTGCATAGAATAAACTAGAAGTGATGCATTAAAAAGGTT
CCTATGAAGGAGTATTGGTT

Downstream 100 bases:

>100_bases
CCAAGGTGATGATGTTATGCAGTTAAAACGACGCCTCAGCGTCGTTTTTTTTGGGATTGATTAGACCTAAATTGCTCATA
TTTGCATTCACTAGGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNERSGELLGLYQALITEVKSQFAEDNTLTAKNLFKSVTQGKEFLRLKEQAKEDELALVEQFLKRDIASFLREQNADSLS
HSPSLIVLENTLWHWLSEITDRSQVEWHELTQDFKHHGYYQSGDIVNQGIMVCTNCGHEMSIEFPSEIPDCPECDNEEFT
REPLTP

Sequences:

>Translated_166_residues
MNERSGELLGLYQALITEVKSQFAEDNTLTAKNLFKSVTQGKEFLRLKEQAKEDELALVEQFLKRDIASFLREQNADSLS
HSPSLIVLENTLWHWLSEITDRSQVEWHELTQDFKHHGYYQSGDIVNQGIMVCTNCGHEMSIEFPSEIPDCPECDNEEFT
REPLTP
>Mature_166_residues
MNERSGELLGLYQALITEVKSQFAEDNTLTAKNLFKSVTQGKEFLRLKEQAKEDELALVEQFLKRDIASFLREQNADSLS
HSPSLIVLENTLWHWLSEITDRSQVEWHELTQDFKHHGYYQSGDIVNQGIMVCTNCGHEMSIEFPSEIPDCPECDNEEFT
REPLTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786863, Length=131, Percent_Identity=32.824427480916, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009912 [H]

Pfam domain/function: PF07295 DUF1451 [H]

EC number: NA

Molecular weight: Translated: 19149; Mature: 19149

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERSGELLGLYQALITEVKSQFAEDNTLTAKNLFKSVTQGKEFLRLKEQAKEDELALVE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QFLKRDIASFLREQNADSLSHSPSLIVLENTLWHWLSEITDRSQVEWHELTQDFKHHGYY
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QSGDIVNQGIMVCTNCGHEMSIEFPSEIPDCPECDNEEFTREPLTP
CCCCHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNERSGELLGLYQALITEVKSQFAEDNTLTAKNLFKSVTQGKEFLRLKEQAKEDELALVE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QFLKRDIASFLREQNADSLSHSPSLIVLENTLWHWLSEITDRSQVEWHELTQDFKHHGYY
HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
QSGDIVNQGIMVCTNCGHEMSIEFPSEIPDCPECDNEEFTREPLTP
CCCCHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]