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The map label for this gene is yfgC [C]

Identifier: 120597829

GI number: 120597829

Start: 1141757

End: 1142566

Strand: Direct

Name: yfgC [C]

Synonym: Sputw3181_0999

Alternate gene names: 120597829

Gene position: 1141757-1142566 (Clockwise)

Preceding gene: 120597828

Following gene: 120597830

Centisome position: 24.25

GC content: 47.41

Gene sequence:

>810_bases
ATGAAATCAAAACGATTAAGCTTGATGGTGATCACTGTCATGCTCGGATTATCGGCCTGTGCAACCACAAAATCGCCAAC
AGGAAGGGGTCAGACTCTGTTGTATTCATCAGCGCAAATGCAGCAGATGGGTGATGCCTCTTTTGAAGAGATGAAAAAGC
AACTGAAGGTGAGTAACGATAAAAAGCTGACACAATATGTTAATTGTGTGGCTAGCCGCATTACGGCGGTATTGCCAGAT
CAGACCCAACGCTGGGATGTAGTATTGTTTGACTCTGAACAAGTCAACGCGTTTGCCTTGCCGGGAGGCCATATCGGTGT
TTATACCGGATTACTTAAAGTCGCTAATGGTCCTGATCAGCTTGCCACTGTTATTGGTCACGAAGTTGCCCATGTACTGG
CGCAACATGGGAACGAACAGGTGTCCCGTGGGCAGTTAACGGGCGTTGGCATGCAAATAGCCGATGCAGCGTTGGGGGCG
AGTGGAGTGTCGAATCGTGACTTGTATATGTCAGCTCTGGGGTTGGGTGCCCAAGTTGGGGTTATTTTGCCCTTTGGTAG
AGCCCAAGAAAGTGAAGCCGATGTGATGGGGGTAGAGTTGATGGCGCGTGCAGGTTTTGATCCCGCACAAAGTGTTGAAC
TATGGCAAAATATGTCGAAAGCGGGAGGAAGCCAAGGTATTGAATTGTTATCGACTCATCCATCAAACAGCAACCGTATT
GCTCAGTTGCAACAACTTCAAAGCCAAATGCAACCGCTATATCAAAGCGCAAAGGTCAATGTTAAAAACCAGTGTGTTGC
ACCTAAATAA

Upstream 100 bases:

>100_bases
ATCCCATTTGGCTTATCGGCCTTATCTCAGTAAAATCATTTCATTCGCAGAGTCCTGAAAAGACTTCGTCATGTGATCAA
AGGATTTGGGAGAGTTCTAC

Downstream 100 bases:

>100_bases
CAATAATAGACAATTTCTATAATGAGTTAGCCCAGAAAGTTAAATAAGCAGTCAGTTTATCAGCATAAGCCTTCGAACTA
TGCTAAACTGGCGCGCAAAA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKSKRLSLMVITVMLGLSACATTKSPTGRGQTLLYSSAQMQQMGDASFEEMKKQLKVSNDKKLTQYVNCVASRITAVLPD
QTQRWDVVLFDSEQVNAFALPGGHIGVYTGLLKVANGPDQLATVIGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGA
SGVSNRDLYMSALGLGAQVGVILPFGRAQESEADVMGVELMARAGFDPAQSVELWQNMSKAGGSQGIELLSTHPSNSNRI
AQLQQLQSQMQPLYQSAKVNVKNQCVAPK

Sequences:

>Translated_269_residues
MKSKRLSLMVITVMLGLSACATTKSPTGRGQTLLYSSAQMQQMGDASFEEMKKQLKVSNDKKLTQYVNCVASRITAVLPD
QTQRWDVVLFDSEQVNAFALPGGHIGVYTGLLKVANGPDQLATVIGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGA
SGVSNRDLYMSALGLGAQVGVILPFGRAQESEADVMGVELMARAGFDPAQSVELWQNMSKAGGSQGIELLSTHPSNSNRI
AQLQQLQSQMQPLYQSAKVNVKNQCVAPK
>Mature_269_residues
MKSKRLSLMVITVMLGLSACATTKSPTGRGQTLLYSSAQMQQMGDASFEEMKKQLKVSNDKKLTQYVNCVASRITAVLPD
QTQRWDVVLFDSEQVNAFALPGGHIGVYTGLLKVANGPDQLATVIGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGA
SGVSNRDLYMSALGLGAQVGVILPFGRAQESEADVMGVELMARAGFDPAQSVELWQNMSKAGGSQGIELLSTHPSNSNRI
AQLQQLQSQMQPLYQSAKVNVKNQCVAPK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=238, Percent_Identity=31.5126050420168, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082185, Length=224, Percent_Identity=26.3392857142857, Blast_Score=67, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322940, Length=180, Percent_Identity=28.3333333333333, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28728; Mature: 28728

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKRLSLMVITVMLGLSACATTKSPTGRGQTLLYSSAQMQQMGDASFEEMKKQLKVSND
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCC
KKLTQYVNCVASRITAVLPDQTQRWDVVLFDSEQVNAFALPGGHIGVYTGLLKVANGPDQ
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCHHH
LATVIGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGASGVSNRDLYMSALGLGAQVG
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCEEE
VILPFGRAQESEADVMGVELMARAGFDPAQSVELWQNMSKAGGSQGIELLSTHPSNSNRI
EEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHH
AQLQQLQSQMQPLYQSAKVNVKNQCVAPK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKSKRLSLMVITVMLGLSACATTKSPTGRGQTLLYSSAQMQQMGDASFEEMKKQLKVSND
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHCCCCC
KKLTQYVNCVASRITAVLPDQTQRWDVVLFDSEQVNAFALPGGHIGVYTGLLKVANGPDQ
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCHHH
LATVIGHEVAHVLAQHGNEQVSRGQLTGVGMQIADAALGASGVSNRDLYMSALGLGAQVG
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCEEE
VILPFGRAQESEADVMGVELMARAGFDPAQSVELWQNMSKAGGSQGIELLSTHPSNSNRI
EEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHH
AQLQQLQSQMQPLYQSAKVNVKNQCVAPK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]