| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is rhlE [H]
Identifier: 120597828
GI number: 120597828
Start: 1140341
End: 1141657
Strand: Direct
Name: rhlE [H]
Synonym: Sputw3181_0998
Alternate gene names: 120597828
Gene position: 1140341-1141657 (Clockwise)
Preceding gene: 120597825
Following gene: 120597829
Centisome position: 24.22
GC content: 48.97
Gene sequence:
>1317_bases ATGTTTTTATCCGGTGTTGTCATGACCTTCTCCGAATTTTCGTCATCCTCTGAGTCACTCACTTTTACCAAACTTGGCTT AAATTCGGCCTTGATTAAGGCATTACCTGCGATGCTGCAGTGTCCTACTCTGGTACAGCAATTGGCTATTCCTGCCATAT TAGCGGGGCGTGATGTGTTAGCGTTGGCGCAAACGGGGAGTGGCAAGACCTTAGCATTTGGTTTGCCCTTATTGCAGTCG GTTTTAGAGCAGCAGGCTCAAGCACTGATAACGGCTCAAGCATTGGTACTCGTGCCAACAAGAGAGTTAGCGCAACAAGT GACCCTGGCACTGCAAGCTGTGGCGCAGCCTTTGTCAGGGGCGATGAAAATTCAAACCCTTTGCGGTGGCGTGGACATCG ATAATCAATTAATTGAGCTTGCAGAGCGGCCTCAGATTTTAGTGGCAACCCCTGGGCGTATACTGGATTTATGTAAGCAA TCCCACATTACCCTCGACTCGATAAAGCACCTTGTTTTGGATGAGGCAGACCGTCTATTGGAAATGGGTTTCTGGCCTGA TGTGCAAAAGTTGATTGCGTTGATGCCCAAACATAAGCAAACCTTACTTTTTTCAGCCACGCTGCCCGAGGCTTTGAATA CATTGGCGAGTCAATTGCTGATCAATGATCCATTACGCGTTCAAGCCCACAAGGCTAATTCAGTCGTCCCCCATATTGAA GAACAGCTCTATTTGGTGAATAAGGGCAGTAAAACACAGGCATTGATTGCCCTGCTAAAACAATATCAATGGCCGCAGGT GCTGGTGTTTATTAGCGCCCGTGATGATGCTGATGCGGTCGCTAAACGGCTCGCAAAAGCGGGGATGAAAGTCGCTGCAC TACACGGTGAGAAAGATCAAACGGTGCGCAGCCAAACCTTGGCCGACTTTAAAGCCAAACGCATTCAAATATTAGTGGCG ACAGATTTGATGGCGCGCGGCATTCATATCGATGCCTTGCCTGTGGTGGTCAATCTTGATTTGCCCATGAGTGCGCCTGT GTATGTACATCGAATCGGCCGTACTGCGAGAGCGGGCACCAAAGGGCTGGCGATTTCCCTTGTATGCCATGGTGAAATGG CAACCTTAACAACGATTCGCGGTTTAACCGAGCGAGCGTTACCGCTGACATTATTGGCTGATTTTCCGGTAACAGATAAG CCGAGTGAACAAGCCAGTGATGGTAAGGTTGAACGTAAGCGGCCACCGCGGGATAAACAGGCCAACCGCCGTAGCATAAA TAAGCACAAGGCTAGCGAGTTTAAAGGTAAACGCTAA
Upstream 100 bases:
>100_bases TAAAAACGCTTAAACACGTTCTTTTAAATAAGTTCCTCTAAACAAGTGCCCTTAAACTAAATTGGTATTATTAGGTGACA CTCAGTAGACTTTCGCTCCC
Downstream 100 bases:
>100_bases TCCCATTTGGCTTATCGGCCTTATCTCAGTAAAATCATTTCATTCGCAGAGTCCTGAAAAGACTTCGTCATGTGATCAAA GGATTTGGGAGAGTTCTACA
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MFLSGVVMTFSEFSSSSESLTFTKLGLNSALIKALPAMLQCPTLVQQLAIPAILAGRDVLALAQTGSGKTLAFGLPLLQS VLEQQAQALITAQALVLVPTRELAQQVTLALQAVAQPLSGAMKIQTLCGGVDIDNQLIELAERPQILVATPGRILDLCKQ SHITLDSIKHLVLDEADRLLEMGFWPDVQKLIALMPKHKQTLLFSATLPEALNTLASQLLINDPLRVQAHKANSVVPHIE EQLYLVNKGSKTQALIALLKQYQWPQVLVFISARDDADAVAKRLAKAGMKVAALHGEKDQTVRSQTLADFKAKRIQILVA TDLMARGIHIDALPVVVNLDLPMSAPVYVHRIGRTARAGTKGLAISLVCHGEMATLTTIRGLTERALPLTLLADFPVTDK PSEQASDGKVERKRPPRDKQANRRSINKHKASEFKGKR
Sequences:
>Translated_438_residues MFLSGVVMTFSEFSSSSESLTFTKLGLNSALIKALPAMLQCPTLVQQLAIPAILAGRDVLALAQTGSGKTLAFGLPLLQS VLEQQAQALITAQALVLVPTRELAQQVTLALQAVAQPLSGAMKIQTLCGGVDIDNQLIELAERPQILVATPGRILDLCKQ SHITLDSIKHLVLDEADRLLEMGFWPDVQKLIALMPKHKQTLLFSATLPEALNTLASQLLINDPLRVQAHKANSVVPHIE EQLYLVNKGSKTQALIALLKQYQWPQVLVFISARDDADAVAKRLAKAGMKVAALHGEKDQTVRSQTLADFKAKRIQILVA TDLMARGIHIDALPVVVNLDLPMSAPVYVHRIGRTARAGTKGLAISLVCHGEMATLTTIRGLTERALPLTLLADFPVTDK PSEQASDGKVERKRPPRDKQANRRSINKHKASEFKGKR >Mature_438_residues MFLSGVVMTFSEFSSSSESLTFTKLGLNSALIKALPAMLQCPTLVQQLAIPAILAGRDVLALAQTGSGKTLAFGLPLLQS VLEQQAQALITAQALVLVPTRELAQQVTLALQAVAQPLSGAMKIQTLCGGVDIDNQLIELAERPQILVATPGRILDLCKQ SHITLDSIKHLVLDEADRLLEMGFWPDVQKLIALMPKHKQTLLFSATLPEALNTLASQLLINDPLRVQAHKANSVVPHIE EQLYLVNKGSKTQALIALLKQYQWPQVLVFISARDDADAVAKRLAKAGMKVAALHGEKDQTVRSQTLADFKAKRIQILVA TDLMARGIHIDALPVVVNLDLPMSAPVYVHRIGRTARAGTKGLAISLVCHGEMATLTTIRGLTERALPLTLLADFPVTDK PSEQASDGKVERKRPPRDKQANRRSINKHKASEFKGKR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI216548263, Length=351, Percent_Identity=37.3219373219373, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI262231852, Length=351, Percent_Identity=37.3219373219373, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI13518015, Length=351, Percent_Identity=37.3219373219373, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI262118318, Length=350, Percent_Identity=37.4285714285714, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=38.7862796833773, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI20149629, Length=384, Percent_Identity=35.6770833333333, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31542656, Length=357, Percent_Identity=39.2156862745098, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI41327771, Length=370, Percent_Identity=34.5945945945946, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=35.3932584269663, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=33.8935574229692, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI51094101, Length=385, Percent_Identity=35.0649350649351, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI164419743, Length=385, Percent_Identity=35.0649350649351, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=35.2112676056338, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=35.2112676056338, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI164664518, Length=403, Percent_Identity=32.258064516129, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI7661920, Length=377, Percent_Identity=31.0344827586207, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI301171467, Length=348, Percent_Identity=36.4942528735632, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI87196351, Length=348, Percent_Identity=36.4942528735632, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI301171475, Length=348, Percent_Identity=36.4942528735632, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=34.7826086956522, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI188035877, Length=334, Percent_Identity=37.4251497005988, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI169881239, Length=353, Percent_Identity=36.2606232294618, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13514809, Length=353, Percent_Identity=36.2606232294618, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI41327776, Length=387, Percent_Identity=34.625322997416, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=34.5403899721448, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI4758138, Length=338, Percent_Identity=34.6153846153846, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI21040371, Length=356, Percent_Identity=33.4269662921348, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI38569505, Length=371, Percent_Identity=34.2318059299191, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI38569503, Length=371, Percent_Identity=34.2318059299191, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI55749865, Length=336, Percent_Identity=33.0357142857143, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=32.4175824175824, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI83700235, Length=379, Percent_Identity=31.3984168865435, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI13514831, Length=366, Percent_Identity=34.6994535519126, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=32.5779036827195, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=32.5779036827195, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI256223453, Length=371, Percent_Identity=31.8059299191375, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=30.0248138957816, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI38327634, Length=374, Percent_Identity=32.0855614973262, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI41327779, Length=343, Percent_Identity=35.5685131195335, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI50659095, Length=382, Percent_Identity=29.5811518324607, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=30.3191489361702, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=32.0547945205479, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=31.7808219178082, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI17505907, Length=423, Percent_Identity=29.7872340425532, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=31.2020460358056, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI62241022, Length=343, Percent_Identity=32.3615160349854, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=30.8988764044944, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=32.2085889570552, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=36.8663594470046, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI154759257, Length=416, Percent_Identity=29.5673076923077, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI9966805, Length=338, Percent_Identity=30.4733727810651, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=28.0120481927711, Blast_Score=115, Evalue=6e-26, Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=42.2043010752688, Blast_Score=289, Evalue=3e-79, Organism=Escherichia coli, GI87082221, Length=372, Percent_Identity=40.5913978494624, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1787605, Length=337, Percent_Identity=45.1038575667656, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1790214, Length=420, Percent_Identity=35.4761904761905, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1788930, Length=375, Percent_Identity=38.6666666666667, Blast_Score=211, Evalue=9e-56, Organism=Escherichia coli, GI48994977, Length=355, Percent_Identity=24.7887323943662, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17555296, Length=425, Percent_Identity=34.3529411764706, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=38.0281690140845, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI32565321, Length=395, Percent_Identity=34.1772151898734, Blast_Score=222, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71995724, Length=379, Percent_Identity=34.3007915567282, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17507121, Length=379, Percent_Identity=34.0369393139842, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17507945, Length=350, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115533224, Length=359, Percent_Identity=35.933147632312, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI71999646, Length=361, Percent_Identity=35.4570637119114, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71999644, Length=361, Percent_Identity=35.4570637119114, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=36.3387978142077, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=36.3387978142077, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=36.3387978142077, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=34.1645885286783, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=35.8333333333333, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17552114, Length=338, Percent_Identity=33.1360946745562, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71987143, Length=361, Percent_Identity=31.0249307479224, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI115532548, Length=419, Percent_Identity=31.2649164677804, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI115532546, Length=377, Percent_Identity=32.6259946949602, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507881, Length=348, Percent_Identity=32.7586206896552, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=35.054347826087, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=31.283422459893, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=30.7277628032345, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI193208216, Length=378, Percent_Identity=33.8624338624339, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=30.4582210242588, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17537549, Length=434, Percent_Identity=30.8755760368664, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17509811, Length=360, Percent_Identity=31.6666666666667, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193206561, Length=353, Percent_Identity=33.4277620396601, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17505370, Length=366, Percent_Identity=34.1530054644809, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=31.4447592067989, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17556951, Length=359, Percent_Identity=29.5264623955432, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17508543, Length=394, Percent_Identity=31.9796954314721, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17553716, Length=343, Percent_Identity=29.1545189504373, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17507641, Length=371, Percent_Identity=32.0754716981132, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=31.266846361186, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17536099, Length=375, Percent_Identity=29.6, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17536101, Length=375, Percent_Identity=29.6, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17536103, Length=375, Percent_Identity=29.6, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=25.8373205741627, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI71997889, Length=417, Percent_Identity=26.8585131894484, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71982862, Length=218, Percent_Identity=31.651376146789, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148291, Length=368, Percent_Identity=25.2717391304348, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=25.5255255255255, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=39.3258426966292, Blast_Score=80, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=39.1184573002755, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6321856, Length=439, Percent_Identity=34.3963553530752, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6324217, Length=399, Percent_Identity=35.0877192982456, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6325138, Length=386, Percent_Identity=36.0103626943005, Blast_Score=216, Evalue=8e-57, Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=33.8935574229692, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6324778, Length=379, Percent_Identity=35.6200527704486, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=380, Percent_Identity=31.3157894736842, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=31.25, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=432, Percent_Identity=32.8703703703704, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=356, Percent_Identity=33.4269662921348, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=383, Percent_Identity=29.5039164490862, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=352, Percent_Identity=34.0909090909091, Blast_Score=180, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=34.6153846153846, Blast_Score=177, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=334, Percent_Identity=35.0299401197605, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=31.0344827586207, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=345, Percent_Identity=32.7536231884058, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=31.767955801105, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=31.767955801105, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=391, Percent_Identity=30.1790281329923, Blast_Score=166, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=30.5912596401028, Blast_Score=162, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=417, Percent_Identity=29.9760191846523, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=425, Percent_Identity=29.4117647058824, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6320173, Length=243, Percent_Identity=34.9794238683128, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=432, Percent_Identity=29.1666666666667, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=394, Percent_Identity=29.1878172588832, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6321374, Length=385, Percent_Identity=24.9350649350649, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24585582, Length=443, Percent_Identity=35.2144469525959, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=36.2359550561798, Blast_Score=228, Evalue=4e-60, Organism=Drosophila melanogaster, GI24584994, Length=369, Percent_Identity=35.230352303523, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.1823361823362, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=34.1736694677871, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI28575014, Length=359, Percent_Identity=36.7688022284123, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI21356161, Length=378, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644479, Length=359, Percent_Identity=33.1476323119777, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=33.2402234636872, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=33.2402234636872, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=33.2402234636872, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI28574962, Length=342, Percent_Identity=34.7953216374269, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=33.2402234636872, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=33.2402234636872, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=33.2402234636872, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=37.0056497175141, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI17985987, Length=354, Percent_Identity=36.4406779661017, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24645031, Length=375, Percent_Identity=32.5333333333333, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI21355075, Length=377, Percent_Identity=33.1564986737401, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI17136814, Length=359, Percent_Identity=34.5403899721448, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI18857967, Length=338, Percent_Identity=33.4319526627219, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI24583279, Length=338, Percent_Identity=33.7278106508876, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583281, Length=338, Percent_Identity=33.7278106508876, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=32.2946175637394, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=32.2946175637394, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=32.2946175637394, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=31.2328767123288, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=31.2328767123288, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=31.2328767123288, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=31.2328767123288, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI281365720, Length=335, Percent_Identity=31.9402985074627, Blast_Score=165, Evalue=5e-41, Organism=Drosophila melanogaster, GI28571808, Length=371, Percent_Identity=30.4582210242588, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI28571809, Length=371, Percent_Identity=30.4582210242588, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=32.9479768786127, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI17647335, Length=393, Percent_Identity=29.0076335877863, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24643725, Length=389, Percent_Identity=29.305912596401, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24642822, Length=363, Percent_Identity=31.9559228650138, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI21355559, Length=398, Percent_Identity=33.1658291457286, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI20130173, Length=468, Percent_Identity=26.7094017094017, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136666, Length=439, Percent_Identity=29.6127562642369, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI19920478, Length=375, Percent_Identity=26.9333333333333, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI24668515, Length=369, Percent_Identity=27.6422764227642, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=37.8995433789954, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=37.8995433789954, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=23.7822349570201, Blast_Score=92, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47597; Mature: 47597
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSGVVMTFSEFSSSSESLTFTKLGLNSALIKALPAMLQCPTLVQQLAIPAILAGRDVL CCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ALAQTGSGKTLAFGLPLLQSVLEQQAQALITAQALVLVPTRELAQQVTLALQAVAQPLSG EEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHCC AMKIQTLCGGVDIDNQLIELAERPQILVATPGRILDLCKQSHITLDSIKHLVLDEADRLL HHHHHHHHCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EMGFWPDVQKLIALMPKHKQTLLFSATLPEALNTLASQLLINDPLRVQAHKANSVVPHIE HCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC EQLYLVNKGSKTQALIALLKQYQWPQVLVFISARDDADAVAKRLAKAGMKVAALHGEKDQ CEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHH TVRSQTLADFKAKRIQILVATDLMARGIHIDALPVVVNLDLPMSAPVYVHRIGRTARAGT HHHHHHHHHHHHHHEEEEEEHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHCCHHCCCC KGLAISLVCHGEMATLTTIRGLTERALPLTLLADFPVTDKPSEQASDGKVERKRPPRDKQ CCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH ANRRSINKHKASEFKGKR HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFLSGVVMTFSEFSSSSESLTFTKLGLNSALIKALPAMLQCPTLVQQLAIPAILAGRDVL CCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ALAQTGSGKTLAFGLPLLQSVLEQQAQALITAQALVLVPTRELAQQVTLALQAVAQPLSG EEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHCC AMKIQTLCGGVDIDNQLIELAERPQILVATPGRILDLCKQSHITLDSIKHLVLDEADRLL HHHHHHHHCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EMGFWPDVQKLIALMPKHKQTLLFSATLPEALNTLASQLLINDPLRVQAHKANSVVPHIE HCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC EQLYLVNKGSKTQALIALLKQYQWPQVLVFISARDDADAVAKRLAKAGMKVAALHGEKDQ CEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCHH TVRSQTLADFKAKRIQILVATDLMARGIHIDALPVVVNLDLPMSAPVYVHRIGRTARAGT HHHHHHHHHHHHHHEEEEEEHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHCCHHCCCC KGLAISLVCHGEMATLTTIRGLTERALPLTLLADFPVTDKPSEQASDGKVERKRPPRDKQ CCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH ANRRSINKHKASEFKGKR HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]