Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yghX [H]

Identifier: 120597773

GI number: 120597773

Start: 1073144

End: 1074139

Strand: Direct

Name: yghX [H]

Synonym: Sputw3181_0943

Alternate gene names: 120597773

Gene position: 1073144-1074139 (Clockwise)

Preceding gene: 120597772

Following gene: 120597774

Centisome position: 22.79

GC content: 47.89

Gene sequence:

>996_bases
ATGACACAGCGACCAACGCAGCCTCACCCCACCGCTAGCCAATCTAGTGCGATTACAACTAATCCACAACAACCTATTCC
ACAAGAAGCCTTCGATTGGTATGACGAATATGCCCACGGTATTATCGATCGTCGTGAGTTTATGGCTCGTCTTGCTGGGC
TGGTGGCGCTCGGTTTTACCCTGACAAGCCTTACCAGCGCATTGCTGCCTAACTATGCCTTAGCCGAACAAGTTTCCTTT
AATGATCCCAGTATTAAAGCCAGCTATGTAAAATTTCCTTCTCCAAATGGCTATGGTGAGGGGCGCGGTTATTTGGTGGT
ACCTAGCAGCCTGCTTAAGATTGAAGTGGATGGTAAACCTGCTGAAACATTGATTTACGACACCGATAAAAAAGCCCCTG
TGGTACTTGTGGTGCATGAAAATCGTGGTCTTAATCCTTATATTGAAGATGTTGCCCGCCGTTTAGCGGCGCAAGGCTAT
ATTGCTTTCGCTCCCGATGCGCTCTACTCCCTCGGTGGTTACCCGGGCAATGACGATACGGGCCGTGCGATGCAAAGCAA
TTTGGATCGCGCCAAAATGGAGCAAGATTTTATTGCCGCTGCACTCTTTTTAAAGTCCCACCCCCAAAGTAGTGGCAAAC
TCGGCGCTGTGGGTTTTTGTTTTGGTGGCTATATCGTCAATATGTTAGCCGCCACCATTCCAGATGATCTTAATGCTGGT
GTTTCTTTCTACGGTACGCCCGCCGCACCCGAACTGCGTAGCCGTGTAAAAGGGCCGTTAATGCTGCAGTTTGCTGAGCT
TGATCAGCGGATTAATGACACTTGGGCAGAATATGAAGCGCAGCTAAAAGCCAATAAAGCCGATTATGTTGCTTACCTTT
ACCCCAAGGTGAACCACGGTTTTCATAATGATTCCACCGCAAGGTATGATAAAACGACCGCCGAATTTGCTTGGTCACGC
AGTTTAGATTTCTTCTCGAAATATCTAGGTGGTTAA

Upstream 100 bases:

>100_bases
GCCTTCGTTGTGTTTAATCCTTTACTCTTTATTAACACTAAGAACCACAAGCTAGGTAAGATCAATACCTGCGGTTAGCT
TGTTTAATGGAGTTTTATCT

Downstream 100 bases:

>100_bases
CTCAGATGAGTGCACTTAGTGAATGAGTTGCACTCTTCTATCTACGCGTCATCCACGACTTGCCTATTTGCTTAATATTA
CCGCTCAGGCGACTGGGCTA

Product: dienelactone hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTQRPTQPHPTASQSSAITTNPQQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTLTSLTSALLPNYALAEQVSF
NDPSIKASYVKFPSPNGYGEGRGYLVVPSSLLKIEVDGKPAETLIYDTDKKAPVVLVVHENRGLNPYIEDVARRLAAQGY
IAFAPDALYSLGGYPGNDDTGRAMQSNLDRAKMEQDFIAAALFLKSHPQSSGKLGAVGFCFGGYIVNMLAATIPDDLNAG
VSFYGTPAAPELRSRVKGPLMLQFAELDQRINDTWAEYEAQLKANKADYVAYLYPKVNHGFHNDSTARYDKTTAEFAWSR
SLDFFSKYLGG

Sequences:

>Translated_331_residues
MTQRPTQPHPTASQSSAITTNPQQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTLTSLTSALLPNYALAEQVSF
NDPSIKASYVKFPSPNGYGEGRGYLVVPSSLLKIEVDGKPAETLIYDTDKKAPVVLVVHENRGLNPYIEDVARRLAAQGY
IAFAPDALYSLGGYPGNDDTGRAMQSNLDRAKMEQDFIAAALFLKSHPQSSGKLGAVGFCFGGYIVNMLAATIPDDLNAG
VSFYGTPAAPELRSRVKGPLMLQFAELDQRINDTWAEYEAQLKANKADYVAYLYPKVNHGFHNDSTARYDKTTAEFAWSR
SLDFFSKYLGG
>Mature_330_residues
TQRPTQPHPTASQSSAITTNPQQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFTLTSLTSALLPNYALAEQVSFN
DPSIKASYVKFPSPNGYGEGRGYLVVPSSLLKIEVDGKPAETLIYDTDKKAPVVLVVHENRGLNPYIEDVARRLAAQGYI
AFAPDALYSLGGYPGNDDTGRAMQSNLDRAKMEQDFIAAALFLKSHPQSSGKLGAVGFCFGGYIVNMLAATIPDDLNAGV
SFYGTPAAPELRSRVKGPLMLQFAELDQRINDTWAEYEAQLKANKADYVAYLYPKVNHGFHNDSTARYDKTTAEFAWSRS
LDFFSKYLGG

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994982, Length=218, Percent_Identity=30.7339449541284, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 36389; Mature: 36258

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRPTQPHPTASQSSAITTNPQQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFT
CCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTSLTSALLPNYALAEQVSFNDPSIKASYVKFPSPNGYGEGRGYLVVPSSLLKIEVDGKP
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCC
AETLIYDTDKKAPVVLVVHENRGLNPYIEDVARRLAAQGYIAFAPDALYSLGGYPGNDDT
CCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCC
GRAMQSNLDRAKMEQDFIAAALFLKSHPQSSGKLGAVGFCFGGYIVNMLAATIPDDLNAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
VSFYGTPAAPELRSRVKGPLMLQFAELDQRINDTWAEYEAQLKANKADYVAYLYPKVNHG
CEECCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
FHNDSTARYDKTTAEFAWSRSLDFFSKYLGG
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
TQRPTQPHPTASQSSAITTNPQQPIPQEAFDWYDEYAHGIIDRREFMARLAGLVALGFT
CCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTSLTSALLPNYALAEQVSFNDPSIKASYVKFPSPNGYGEGRGYLVVPSSLLKIEVDGKP
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCC
AETLIYDTDKKAPVVLVVHENRGLNPYIEDVARRLAAQGYIAFAPDALYSLGGYPGNDDT
CCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCC
GRAMQSNLDRAKMEQDFIAAALFLKSHPQSSGKLGAVGFCFGGYIVNMLAATIPDDLNAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
VSFYGTPAAPELRSRVKGPLMLQFAELDQRINDTWAEYEAQLKANKADYVAYLYPKVNHG
CEECCCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
FHNDSTARYDKTTAEFAWSRSLDFFSKYLGG
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]