Click here to switch to the map view.

The map label for this gene is mdoD

Identifier: 120597754

GI number: 120597754

Start: 1049026

End: 1050810

Strand: Direct

Name: mdoD

Synonym: Sputw3181_0924

Alternate gene names: 120597754

Gene position: 1049026-1050810 (Clockwise)

Preceding gene: 120597753

Following gene: 120597756

Centisome position: 22.28

GC content: 45.38

Gene sequence:

>1785_bases
ATGGTTATCATTGTCATCAACAGTTCTCCACAGGGCAGTCATTGCATATTGCTTATATGTGCAGCGAAGTGTCAGGAAGT
TACACCAATTCAGAGTCTGCTTATGCAACCCAATTTATTTCCCGAACAAAGAAATGTTAACCGTGAATTGATGGCTATGC
CGTCATCAGTTGAAATTCAATCTACTCGTGGACGTTTGCAACGTATGGTTGGCAGTGTATTGCTGACCTGTAGTGTATTG
CTAAGTCTTTCCGCCTGCGCTGCAGGTAAGGCGAGCGCGCCGCAAGAGGGCGAAGAGTTCAGTTATGCATGGCTTAAGGG
TCATGCTCGTACACTTGCTGCTGAGTCCTATGTTAGTCACAAGGGCGAACTGCCTAAAAGCCTGCAGGGGATGAGCTGGG
ATGATTACCAGCAGTTCCATTTTAAGAAAAAAGCGGCAATGTGGCGTGATCAGGATTCTGAGTTTCGTGCCGAATTATTT
CACCTAGGTTTGTATTTTGATACGCCAGTACATATCTATGAGTTAGATGAGAGTAAGGCCAAACTTATCGAATACTCACC
ATCGATGTTTGATTACGGCAAGTCTAAAGTGAAAGGAAGTCAGCTACCTAAAGATCTCGGTTTTGCTGGATTTAGAATGC
AGTTTAATACCGATTGGCAGCGTGATGTGGTGGCTTTCCTTGGGGCGAGTTATTTCCGAGCAGTAGGTCAAGAGATGCAA
TACGGTTTATCAGCCCGTGGTTTGGCGGTTGATACTGCATTACCAAAACCTGAAGAGTTTCCAATGTTTACTCATTTCTG
GTTAGAGAAACCTAAACCAGGCTCGAATATTGCCACCGTCTATGCATTGTTAGATTCTCCAAGTGTGACTGGCGCTTACC
GTTTTGACATTGAGCCAGGTGAGCGTTTGAAGATGAAAGTCGATGCGGCGATTTATCCCCGTAAAGCGATTGAGCGTTTA
GGTGTCGCGCCACTAACCAGTATGTATATGGTGGGTGAAAACGATCGCCGTACTGGTTATGACTGGCGTCAAGAGATCCA
CGATTCGGATGGCTTAGCAATGCATACAGGGAGTGGCGAATGGATTTGGCGTCCACTCGCTAACCCAGAAAATCTGCGAT
TCAACGCCTATAGCGATGAAAATCCAAGAGGTTTTGGTTTAATGCAGCGCGATCGTAATTTTGATCATTATCAGGATGAC
GGTGTTTTCTACGAAAAACGTCCAAGTTTATGGATTGAACCTACGGGAAGTTGGGGTAAAGGTTCTGTACAGCTAGTGGA
AATCCCAACGCTGGATGAAACCTTCGATAACATAGTGGCATTTTGGAACCCTGCAGAGCCTATTTTACCAGGTCAAGAGT
TGCTTTATAGCTACAACATGTATTGGGGAGGCATTCCACCTGTGCAATCACCTCGTGCCCGTGTTGTTGATACTTTCACT
GGTTTAGGTGGTGTGGTTGGTCAGAAGCGCAAATATTACAGTAAGCGCTTTGTTATCGATTTTGCTGGTGGCACTTTACC
TATGTTAGGCAAAGATACTCAAGTAAAAGCGGTGATCAGTACCTCACAAGGCCGTGTAGAAATCGAATCAGCACGTCCTT
TAGCATCGATTAATGGCTATCGTGCTATGTTTGATGTAGTGCCTCCAGAGGACAGCGTTGAGCCAATTAACCTAAGAGTT
TACTTAGAAGTCGATGGTCAACCACTGTCTGAGACTTGGATGTATCAGTGGAATCCGCCCGCTAAGGATGATCGTGAACT
CTATAACGCGGGCCATCTGCAATAA

Upstream 100 bases:

>100_bases
TATTTTCATAAACTGACGGCAGTATTGAAAATAGCCGCCGTGCCGTATTCCATTGTGCTGAAATTATGTTAGATTCTGGC
GAACTGATGGAGATAAAGGT

Downstream 100 bases:

>100_bases
GCGATTTGTGAGTCATTAATCTAAAATGCCAGCTAACTTAGCTGGCATTTTTGTTTTGGCTTTAGCCACTTTTTACTTAG
GGGTATATACGGCTTGATAG

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MVIIVINSSPQGSHCILLICAAKCQEVTPIQSLLMQPNLFPEQRNVNRELMAMPSSVEIQSTRGRLQRMVGSVLLTCSVL
LSLSACAAGKASAPQEGEEFSYAWLKGHARTLAAESYVSHKGELPKSLQGMSWDDYQQFHFKKKAAMWRDQDSEFRAELF
HLGLYFDTPVHIYELDESKAKLIEYSPSMFDYGKSKVKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQ
YGLSARGLAVDTALPKPEEFPMFTHFWLEKPKPGSNIATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERL
GVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHTGSGEWIWRPLANPENLRFNAYSDENPRGFGLMQRDRNFDHYQDD
GVFYEKRPSLWIEPTGSWGKGSVQLVEIPTLDETFDNIVAFWNPAEPILPGQELLYSYNMYWGGIPPVQSPRARVVDTFT
GLGGVVGQKRKYYSKRFVIDFAGGTLPMLGKDTQVKAVISTSQGRVEIESARPLASINGYRAMFDVVPPEDSVEPINLRV
YLEVDGQPLSETWMYQWNPPAKDDRELYNAGHLQ

Sequences:

>Translated_594_residues
MVIIVINSSPQGSHCILLICAAKCQEVTPIQSLLMQPNLFPEQRNVNRELMAMPSSVEIQSTRGRLQRMVGSVLLTCSVL
LSLSACAAGKASAPQEGEEFSYAWLKGHARTLAAESYVSHKGELPKSLQGMSWDDYQQFHFKKKAAMWRDQDSEFRAELF
HLGLYFDTPVHIYELDESKAKLIEYSPSMFDYGKSKVKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQ
YGLSARGLAVDTALPKPEEFPMFTHFWLEKPKPGSNIATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERL
GVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHTGSGEWIWRPLANPENLRFNAYSDENPRGFGLMQRDRNFDHYQDD
GVFYEKRPSLWIEPTGSWGKGSVQLVEIPTLDETFDNIVAFWNPAEPILPGQELLYSYNMYWGGIPPVQSPRARVVDTFT
GLGGVVGQKRKYYSKRFVIDFAGGTLPMLGKDTQVKAVISTSQGRVEIESARPLASINGYRAMFDVVPPEDSVEPINLRV
YLEVDGQPLSETWMYQWNPPAKDDRELYNAGHLQ
>Mature_594_residues
MVIIVINSSPQGSHCILLICAAKCQEVTPIQSLLMQPNLFPEQRNVNRELMAMPSSVEIQSTRGRLQRMVGSVLLTCSVL
LSLSACAAGKASAPQEGEEFSYAWLKGHARTLAAESYVSHKGELPKSLQGMSWDDYQQFHFKKKAAMWRDQDSEFRAELF
HLGLYFDTPVHIYELDESKAKLIEYSPSMFDYGKSKVKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQ
YGLSARGLAVDTALPKPEEFPMFTHFWLEKPKPGSNIATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERL
GVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHTGSGEWIWRPLANPENLRFNAYSDENPRGFGLMQRDRNFDHYQDD
GVFYEKRPSLWIEPTGSWGKGSVQLVEIPTLDETFDNIVAFWNPAEPILPGQELLYSYNMYWGGIPPVQSPRARVVDTFT
GLGGVVGQKRKYYSKRFVIDFAGGTLPMLGKDTQVKAVISTSQGRVEIESARPLASINGYRAMFDVVPPEDSVEPINLRV
YLEVDGQPLSETWMYQWNPPAKDDRELYNAGHLQ

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=520, Percent_Identity=43.6538461538462, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI1787286, Length=511, Percent_Identity=41.2915851272016, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 67111; Mature: 67111

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIIVINSSPQGSHCILLICAAKCQEVTPIQSLLMQPNLFPEQRNVNRELMAMPSSVEIQ
CEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHCCCHHHHCCCCCEEEH
STRGRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEGEEFSYAWLKGHARTLAAESYVSH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHC
KGELPKSLQGMSWDDYQQFHFKKKAAMWRDQDSEFRAELFHLGLYFDTPVHIYELDESKA
CCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCEEEEECCCCCC
KLIEYSPSMFDYGKSKVKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQ
HHEECCCCHHHCCCHHCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
YGLSARGLAVDTALPKPEEFPMFTHFWLEKPKPGSNIATVYALLDSPSVTGAYRFDIEPG
CCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCC
ERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHTGSGE
CEEEEEECCEECCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCC
WIWRPLANPENLRFNAYSDENPRGFGLMQRDRNFDHYQDDGVFYEKRPSLWIEPTGSWGK
EEEEECCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
GSVQLVEIPTLDETFDNIVAFWNPAEPILPGQELLYSYNMYWGGIPPVQSPRARVVDTFT
CCEEEEEECCCHHHHHCEEEEECCCCCCCCCHHHHEEECCEECCCCCCCCCCHHHHHHHH
GLGGVVGQKRKYYSKRFVIDFAGGTLPMLGKDTQVKAVISTSQGRVEIESARPLASINGY
CCCHHHCCHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHCCCC
RAMFDVVPPEDSVEPINLRVYLEVDGQPLSETWMYQWNPPAKDDRELYNAGHLQ
EEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MVIIVINSSPQGSHCILLICAAKCQEVTPIQSLLMQPNLFPEQRNVNRELMAMPSSVEIQ
CEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHCCCHHHHCCCCCEEEH
STRGRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEGEEFSYAWLKGHARTLAAESYVSH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHC
KGELPKSLQGMSWDDYQQFHFKKKAAMWRDQDSEFRAELFHLGLYFDTPVHIYELDESKA
CCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCEEEEECCCCCC
KLIEYSPSMFDYGKSKVKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQ
HHEECCCCHHHCCCHHCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
YGLSARGLAVDTALPKPEEFPMFTHFWLEKPKPGSNIATVYALLDSPSVTGAYRFDIEPG
CCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCC
ERLKMKVDAAIYPRKAIERLGVAPLTSMYMVGENDRRTGYDWRQEIHDSDGLAMHTGSGE
CEEEEEECCEECCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCC
WIWRPLANPENLRFNAYSDENPRGFGLMQRDRNFDHYQDDGVFYEKRPSLWIEPTGSWGK
EEEEECCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
GSVQLVEIPTLDETFDNIVAFWNPAEPILPGQELLYSYNMYWGGIPPVQSPRARVVDTFT
CCEEEEEECCCHHHHHCEEEEECCCCCCCCCHHHHEEECCEECCCCCCCCCCHHHHHHHH
GLGGVVGQKRKYYSKRFVIDFAGGTLPMLGKDTQVKAVISTSQGRVEIESARPLASINGY
CCCHHHCCHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHCCCC
RAMFDVVPPEDSVEPINLRVYLEVDGQPLSETWMYQWNPPAKDDRELYNAGHLQ
EEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]