Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is kdpA [H]

Identifier: 120597692

GI number: 120597692

Start: 973490

End: 975214

Strand: Direct

Name: kdpA [H]

Synonym: Sputw3181_0862

Alternate gene names: 120597692

Gene position: 973490-975214 (Clockwise)

Preceding gene: 120597691

Following gene: 120597693

Centisome position: 20.68

GC content: 48.35

Gene sequence:

>1725_bases
ATGTTTGAAATTACCCTTATTTTTACTACTGCGCTTGGGCTCGCATGGCTGTTGGGATCCTATATGACAGGGGTTTTCTC
TGGTCAGTCCCATTTTTCAGATCGTTTATTTAATCCTATTGAAAAGTGGATTTATCGGGCTATCGGCGTAAATGCCCATT
CGGGGATGACATGGAAATCCTATGGTGCGGCGTTTCTTATCAGCAACTTAGTACTTGGTATTTTGGCGTTTCTTATCCTT
AAATTCCAACATGTGTTACCGCTTAACCCCGATGGCATAGGGCCATTATCTTGGGATCTGGCGTTGCACACTGCGGTGTC
ATTCCTCACCAATACCAATCAACAGCACTATTCTGGGCAGGCTCAGCTTAGTTATCTGTCCCAAGGATTTGTCATTGTCA
CGCTGCAATTTGTCACTCCAGCCATGGCGCTGGCGGTTTGTGTGGCGATTTTGCGGGGAATGTTAGGCGGGTTGAATAAT
GACAGCGCCAAAGAGGGCGAGGCTCGAAATCTGGGTAACTATTATGTTGACCTAGTGCGCGGTGTGCTCAGACTTATGCT
GCCATTAGCGGCTATTGTGGCGCTGTTACTGACTTGGCAAGGCGTACCGAGTAGTTTTGACGGTGCGCAAAAAGTGAACA
CCTTAGATTCAGCATCACCTATCTCTGAGCAGGTCGTTCCGATTGGCCCCGTTGCTTCTATGGTGGCCATCAAGCAGTTA
GGCACTAATGGCGGGGGCTGGTATGGTCCCAACAGCAGTAACCCGCTGGAAAACCCAACGCCAGTCAGTAATGCAATCGA
GACCATTGCCTTAGTGTTGATCCCTATGTCCGTCGTTTTTATGGCGGGCGGCATGCTAAGACGCAAAAAATTTACCTTGA
TGGCTCTGGTGGCAATGGGTCTATTGAGCGTCAGTTTTCTTGGGGCAACTGTGTACAGCGAGTTGCAACCCAACGCCGCC
TTTGCGGGATTAAGCGCCCAAGGGCCTAATATGGAGGGTAAAGAAGTTCGCTTTGGACCTGAGCTATCGGCGCTATGGGC
TTCTTTTACCACACAAACCTCTAACGGTTCGGTCAATGCCATGCACGATTCCTTCAATCCAATAGGGGGATTGATGACGC
GATCAGGCATGTTGCTCAATGCGATATGGGGCGGTATTGGCTGCGGTTTTGTTAACTTTATCGTTTATGTGTGGATTGCT
GTTTTCTTATCGGGATTGATGATTGGCCGTACGCCAGAGATATTTGGTCGTAAGCTCGAAACCCGTGAAATCACCCTTTT
GGGAAGTCTATTAGTTTTACCTACCTTATGCGTCTTAGGTTTGACGGCGATCAGTGTGGCGATCCCGAGTATTACGGGCA
ACAGCAACCCCGGCTTTCATGGAATTTCGCAAGTCTTTTACGAATATACCTCCGCTTTTGCTAATAACGGTTCGGGTTTT
GAAGGTTTAGGTGATAACACACCTTGGTGGAATATCAGCTGCGTTATCGCCTTACTGCTTGGTCGATACCTGCCACTGTT
TTTACCGCTGGCGATTGCGGGGATGATGTCGAGTAAAAGAGTGAGCCCCGACAGTAACGCGAGCCTGAAGCTCGAGAGTC
CCACCTTTTGTTTCACCCTTATTGCCGTGATTTTAATCATTAACTTCCTGTCTTTCTTACCAGCGGCGGTATTAGGGCCT
ATTGGCGAAGCTTTAGAACTTGCCACTATGAGTCTGGAGAAATAG

Upstream 100 bases:

>100_bases
GGACAAATTATATGGACTGGATATTTCTAATACTTTCCATAGCACTTTTCATTTACTTAGCAGTGGCAATGTTTGCCCCT
GATAAGTTTTAGGAGTCGTT

Downstream 100 bases:

>100_bases
TCATGCATAAACCTGCTCAAATATTAGATAGCGCCGGCGTGAAGCAAGCTGCCTTTGGTGCTGTAAAGAAAATGTCCTTA
GTGAGTATGGCTGGCAATCC

Product: potassium-transporting ATPase subunit A

Products: NA

Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MFEITLIFTTALGLAWLLGSYMTGVFSGQSHFSDRLFNPIEKWIYRAIGVNAHSGMTWKSYGAAFLISNLVLGILAFLIL
KFQHVLPLNPDGIGPLSWDLALHTAVSFLTNTNQQHYSGQAQLSYLSQGFVIVTLQFVTPAMALAVCVAILRGMLGGLNN
DSAKEGEARNLGNYYVDLVRGVLRLMLPLAAIVALLLTWQGVPSSFDGAQKVNTLDSASPISEQVVPIGPVASMVAIKQL
GTNGGGWYGPNSSNPLENPTPVSNAIETIALVLIPMSVVFMAGGMLRRKKFTLMALVAMGLLSVSFLGATVYSELQPNAA
FAGLSAQGPNMEGKEVRFGPELSALWASFTTQTSNGSVNAMHDSFNPIGGLMTRSGMLLNAIWGGIGCGFVNFIVYVWIA
VFLSGLMIGRTPEIFGRKLETREITLLGSLLVLPTLCVLGLTAISVAIPSITGNSNPGFHGISQVFYEYTSAFANNGSGF
EGLGDNTPWWNISCVIALLLGRYLPLFLPLAIAGMMSSKRVSPDSNASLKLESPTFCFTLIAVILIINFLSFLPAAVLGP
IGEALELATMSLEK

Sequences:

>Translated_574_residues
MFEITLIFTTALGLAWLLGSYMTGVFSGQSHFSDRLFNPIEKWIYRAIGVNAHSGMTWKSYGAAFLISNLVLGILAFLIL
KFQHVLPLNPDGIGPLSWDLALHTAVSFLTNTNQQHYSGQAQLSYLSQGFVIVTLQFVTPAMALAVCVAILRGMLGGLNN
DSAKEGEARNLGNYYVDLVRGVLRLMLPLAAIVALLLTWQGVPSSFDGAQKVNTLDSASPISEQVVPIGPVASMVAIKQL
GTNGGGWYGPNSSNPLENPTPVSNAIETIALVLIPMSVVFMAGGMLRRKKFTLMALVAMGLLSVSFLGATVYSELQPNAA
FAGLSAQGPNMEGKEVRFGPELSALWASFTTQTSNGSVNAMHDSFNPIGGLMTRSGMLLNAIWGGIGCGFVNFIVYVWIA
VFLSGLMIGRTPEIFGRKLETREITLLGSLLVLPTLCVLGLTAISVAIPSITGNSNPGFHGISQVFYEYTSAFANNGSGF
EGLGDNTPWWNISCVIALLLGRYLPLFLPLAIAGMMSSKRVSPDSNASLKLESPTFCFTLIAVILIINFLSFLPAAVLGP
IGEALELATMSLEK
>Mature_574_residues
MFEITLIFTTALGLAWLLGSYMTGVFSGQSHFSDRLFNPIEKWIYRAIGVNAHSGMTWKSYGAAFLISNLVLGILAFLIL
KFQHVLPLNPDGIGPLSWDLALHTAVSFLTNTNQQHYSGQAQLSYLSQGFVIVTLQFVTPAMALAVCVAILRGMLGGLNN
DSAKEGEARNLGNYYVDLVRGVLRLMLPLAAIVALLLTWQGVPSSFDGAQKVNTLDSASPISEQVVPIGPVASMVAIKQL
GTNGGGWYGPNSSNPLENPTPVSNAIETIALVLIPMSVVFMAGGMLRRKKFTLMALVAMGLLSVSFLGATVYSELQPNAA
FAGLSAQGPNMEGKEVRFGPELSALWASFTTQTSNGSVNAMHDSFNPIGGLMTRSGMLLNAIWGGIGCGFVNFIVYVWIA
VFLSGLMIGRTPEIFGRKLETREITLLGSLLVLPTLCVLGLTAISVAIPSITGNSNPGFHGISQVFYEYTSAFANNGSGF
EGLGDNTPWWNISCVIALLLGRYLPLFLPLAIAGMMSSKRVSPDSNASLKLESPTFCFTLIAVILIINFLSFLPAAVLGP
IGEALELATMSLEK

Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]

COG id: COG2060

COG function: function code P; K+-transporting ATPase, A chain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdpA family [H]

Homologues:

Organism=Escherichia coli, GI1786915, Length=534, Percent_Identity=40.8239700374532, Blast_Score=364, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004623 [H]

Pfam domain/function: PF03814 KdpA [H]

EC number: =3.6.3.12 [H]

Molecular weight: Translated: 61294; Mature: 61294

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]