BacMap

Definition	Shewanella sp. W3-18-1 chromosome, complete genome.
Accession	NC_008750
Length	4,708,380

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The map label for this gene is dbpA [H]

Identifier: 120597664

GI number: 120597664

Start: 936740

End: 938116

Strand: Direct

Name: dbpA [H]

Synonym: Sputw3181_0834

Alternate gene names: 120597664

Gene position: 936740-938116 (Clockwise)

Preceding gene: 120597663

Following gene: 120597665

Centisome position: 19.9

GC content: 49.82

Gene sequence:

>1377_bases
ATGGCTTTTTCGACTCTTAAGCTAAAACCCGAACTGCTTGAGAACCTTTCTTCTATGGGCTACAACGAGATGACGCCAAT
TCAGGCGCAAAGTTTGCCACCCATTTTAGCGGGGCAGGATGTGATAGGTCAGGGTAAAACTGGCTCGGGTAAAACGGCCG
CCTTCGGCTTAGGATTACTGAACAAGTTAGACGTTAAACGCTTTCGCATTCAAACCTTAGTGTTATGTCCAACCCGCGAG
TTGGCCGACCAAGTGGCGCAGGAAATCCGTACCCTTGCCCGTGGTATTCACAACGTTAAAGTACTGACACTTTGCGGCGG
TGTACCTATGGGGCCACAGGTTGGCTCGCTGGAACACGGCGCGCACATTATTGTGGGTACGCCTGGCCGTATCGTCGATC
ACTTAGATCGCAATCGCTTAGATTTAAGCAATCTCAACATGTTAGTGCTCGATGAAGCTGATCGCATGTTAGAAATGGGT
TTCCAACCCGCCCTCGATGCGATTATCGAACAAGCCCCGCGTGAGCGTCAGACGCTGCTATTCAGCGCGACGTTCCCTGA
GCAAATTCAATCGATTGCTAAGCAAATCATGTATGACCCAAGCATGGTTAAAGTCGAAGGTAATCACGACAGCTTGAGCA
TAGCCCAACATTTCTATCATTTAGATGATGACAAGGCGCGTATGCAAGCGCTGCAATTATTGTTGTTAGAACATAAGCCT
GAAAGCGCGGTGGTGTTCTGTAACACTAAACGCGAAACCCAAAAAGTGGCCGATGAGCTTGAAGGTTTAGGCTTTAGCGT
ATTGGCTTTGCACGGTGATTTAGAGCAAAGAGACAGGGACGAAACCTTGCTGCAATTTGCCAACAAGAGTGCCTGTGTCT
TAGTGGCGACCGACGTTGCCGCCCGTGGTTTAGATATCGATGCGCTGGATGCCGTGTTTAACTATCATGTCGCCTATGAC
ACCGAAGTGCACATTCACCGTATCGGTCGTACTGGCCGTGCGGGCAGTAAAGGCGCCGCTTATACCTTCTATAACGACCA
AGACGGTTACAAGATTGCCTTGTTAGAAGAGTACTTAGAGCGCGAAATCACCAGCGAATCACTGCCATCTGAAAGTCTGC
TCGGTAGCACGCCTGCAGCCCCAACCATGATCACTCTGCAGATCGATGGCGGTAAGAAGGAAAAACTGCGTCCAGGGGAT
ATCTTAGGCGCACTGACGGGCGAAAACGGTATCGAAGGCTCACAGGTGGGTAAAATCCAAGTGACCGATTACCGCGCCTA
TGTGGCCGTTAATCGTAAGGTTGCCAAGAAAGCACTGAACAAACTGACTGGCGGGCGTATTAAAGGTAAATCTTACCGCG
CTTGGCCAATGAAGTAA

Upstream 100 bases:

>100_bases
TAATCGATAAGTAACGCAATTTCAGTAACCTAGTAGCCGCTTCGTTACCCACCACAGGATATTCACCTTGAGCAACTCTG
ATACTAAGCCTAATCCATCA

Downstream 100 bases:

>100_bases
GCTTGGTTTTGCTGTGAGGTTTTGTTAATCCGCTATTGTTGATTAATCACTAAATGAAATTGAGCTTTGGGGCTCAATTT
CATTTTTTATATCAAGTTGC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MAFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQTLVLCPTRE
LADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMG
FQPALDAIIEQAPRERQTLLFSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQALQLLLLEHKP
ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGLDIDALDAVFNYHVAYD
TEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLEREITSESLPSESLLGSTPAAPTMITLQIDGGKKEKLRPGD
ILGALTGENGIEGSQVGKIQVTDYRAYVAVNRKVAKKALNKLTGGRIKGKSYRAWPMK

Sequences:

>Translated_458_residues
MAFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQTLVLCPTRE
LADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMG
FQPALDAIIEQAPRERQTLLFSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQALQLLLLEHKP
ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGLDIDALDAVFNYHVAYD
TEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLEREITSESLPSESLLGSTPAAPTMITLQIDGGKKEKLRPGD
ILGALTGENGIEGSQVGKIQVTDYRAYVAVNRKVAKKALNKLTGGRIKGKSYRAWPMK
>Mature_457_residues
AFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQTLVLCPTREL
ADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGF
QPALDAIIEQAPRERQTLLFSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQALQLLLLEHKPE
SAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGLDIDALDAVFNYHVAYDT
EVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLEREITSESLPSESLLGSTPAAPTMITLQIDGGKKEKLRPGDI
LGALTGENGIEGSQVGKIQVTDYRAYVAVNRKVAKKALNKLTGGRIKGKSYRAWPMK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=38.9355742296919, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=38.9355742296919, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI20149629, Length=347, Percent_Identity=38.328530259366, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=35.1648351648352, Blast_Score=242, Evalue=4e-64,
Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=36.1581920903955, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=36.1581920903955, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=35.5932203389831, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=37.6344086021505, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=37.6344086021505, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=37.6344086021505, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=37.466307277628, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=37.466307277628, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=35, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=38, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=32.0652173913043, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=36.9973190348526, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=35.2777777777778, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI262231852, Length=360, Percent_Identity=35.2777777777778, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI216548263, Length=360, Percent_Identity=35.2777777777778, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI13518015, Length=360, Percent_Identity=35.2777777777778, Blast_Score=215, Evalue=6e-56,
Organism=Homo sapiens, GI222352149, Length=372, Percent_Identity=36.2903225806452, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=33.7628865979381, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI13129006, Length=373, Percent_Identity=35.9249329758713, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=36.5921787709497, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI4758112, Length=382, Percent_Identity=33.2460732984293, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI18375623, Length=382, Percent_Identity=33.2460732984293, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI83700235, Length=370, Percent_Identity=35.1351351351351, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI224593278, Length=381, Percent_Identity=33.0708661417323, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI21040371, Length=377, Percent_Identity=33.42175066313, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=33.9622641509434, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI13514831, Length=351, Percent_Identity=35.3276353276353, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI188035877, Length=342, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI41327776, Length=347, Percent_Identity=33.1412103746398, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI8922886, Length=378, Percent_Identity=32.010582010582, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=31.4285714285714, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI6005743, Length=378, Percent_Identity=32.010582010582, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI41327779, Length=357, Percent_Identity=32.2128851540616, Blast_Score=185, Evalue=8e-47,
Organism=Homo sapiens, GI55749865, Length=371, Percent_Identity=30.4582210242588, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI51094101, Length=366, Percent_Identity=32.5136612021858, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI38327634, Length=330, Percent_Identity=35.1515151515151, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI164419743, Length=366, Percent_Identity=32.5136612021858, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI164419732, Length=340, Percent_Identity=33.5294117647059, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=31.5789473684211, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=29.6019900497512, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI38569503, Length=356, Percent_Identity=30.0561797752809, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI17505907, Length=427, Percent_Identity=28.8056206088993, Blast_Score=158, Evalue=9e-39,
Organism=Homo sapiens, GI62241024, Length=339, Percent_Identity=30.9734513274336, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI38569505, Length=356, Percent_Identity=30.0561797752809, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=33.4415584415584, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=29.2168674698795, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=34.375, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=27.5949367088608, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=25.9168704156479, Blast_Score=112, Evalue=9e-25,
Organism=Escherichia coli, GI1787605, Length=453, Percent_Identity=54.5253863134658, Blast_Score=484, Evalue=1e-138,
Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=42.2459893048128, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1787016, Length=388, Percent_Identity=36.8556701030928, Blast_Score=251, Evalue=8e-68,
Organism=Escherichia coli, GI1790214, Length=385, Percent_Identity=34.5454545454545, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1788930, Length=358, Percent_Identity=35.7541899441341, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI48994977, Length=365, Percent_Identity=24.6575342465753, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=35.5013550135501, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=37.0879120879121, Blast_Score=251, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=37.0879120879121, Blast_Score=251, Evalue=8e-67,
Organism=Caenorhabditis elegans, GI17555296, Length=348, Percent_Identity=39.6551724137931, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI17552642, Length=367, Percent_Identity=37.0572207084469, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=38.3522727272727, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=39.3586005830904, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=36.7847411444142, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=36.7847411444142, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=36.7847411444142, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=36.9565217391304, Blast_Score=224, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=31.0626702997275, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=34.5013477088949, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI115532548, Length=402, Percent_Identity=33.5820895522388, Blast_Score=209, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI32565321, Length=373, Percent_Identity=34.0482573726542, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=35.7340720221607, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=374, Percent_Identity=35.0267379679144, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI71999644, Length=374, Percent_Identity=35.0267379679144, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=382, Percent_Identity=33.7696335078534, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.0404312668464, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=368, Percent_Identity=35.8695652173913, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=31.3559322033898, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17509811, Length=353, Percent_Identity=34.8441926345609, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=360, Percent_Identity=33.6111111111111, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17553716, Length=370, Percent_Identity=30, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=379, Percent_Identity=32.1899736147757, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=348, Percent_Identity=32.7586206896552, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=388, Percent_Identity=31.4432989690722, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17536101, Length=388, Percent_Identity=31.4432989690722, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536103, Length=388, Percent_Identity=31.4432989690722, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=29.6296296296296, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=372, Percent_Identity=31.4516129032258, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=402, Percent_Identity=31.3432835820896, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=395, Percent_Identity=27.5949367088608, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=30.6493506493506, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=32.9842931937173, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=30.1075268817204, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=31.6582914572864, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=27.8236914600551, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148203, Length=390, Percent_Identity=23.3333333333333, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI25148291, Length=344, Percent_Identity=26.7441860465116, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=40, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25148205, Length=313, Percent_Identity=23.3226837060703, Blast_Score=86, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321856, Length=403, Percent_Identity=36.2282878411911, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=34.1530054644809, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=361, Percent_Identity=39.3351800554017, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6324217, Length=349, Percent_Identity=35.5300859598854, Blast_Score=231, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=37.3684210526316, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=32.1428571428571, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=36.0742705570292, Blast_Score=223, Evalue=6e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=36.4672364672365, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=33.7837837837838, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=33.7837837837838, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=346, Percent_Identity=36.7052023121387, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=34.8404255319149, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=34.5108695652174, Blast_Score=186, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=369, Percent_Identity=30.8943089430894, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6320119, Length=381, Percent_Identity=28.3464566929134, Blast_Score=183, Evalue=6e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=345, Percent_Identity=32.463768115942, Blast_Score=179, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=355, Percent_Identity=29.0140845070423, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=31.6216216216216, Blast_Score=172, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=29.4840294840295, Blast_Score=166, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=365, Percent_Identity=32.3287671232877, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=370, Percent_Identity=28.9189189189189, Blast_Score=143, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6320173, Length=208, Percent_Identity=37.5, Blast_Score=142, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=23.960880195599, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=422, Percent_Identity=24.8815165876777, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6322876, Length=182, Percent_Identity=34.0659340659341, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=40.1129943502825, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=36.6391184573003, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24642151, Length=340, Percent_Identity=39.4117647058824, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=36.986301369863, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=35.6940509915014, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=35.4570637119114, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24644487, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI45551833, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644485, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI281361218, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644481, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644479, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644483, Length=384, Percent_Identity=34.1145833333333, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=36.2116991643454, Blast_Score=221, Evalue=7e-58,
Organism=Drosophila melanogaster, GI18857967, Length=397, Percent_Identity=33.5012594458438, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI17985987, Length=396, Percent_Identity=35.6060606060606, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24582080, Length=369, Percent_Identity=34.4173441734417, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24582078, Length=369, Percent_Identity=34.4173441734417, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI17136248, Length=369, Percent_Identity=34.4173441734417, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24582075, Length=369, Percent_Identity=34.4173441734417, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=31.3019390581717, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=31.3019390581717, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI28575014, Length=383, Percent_Identity=34.4647519582245, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI21356161, Length=378, Percent_Identity=34.6560846560847, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=35.2941176470588, Blast_Score=204, Evalue=8e-53,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=33.7988826815642, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24584994, Length=374, Percent_Identity=32.620320855615, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=35.3276353276353, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=35.3276353276353, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24581954, Length=376, Percent_Identity=32.7127659574468, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24581952, Length=376, Percent_Identity=32.7127659574468, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24581956, Length=376, Percent_Identity=32.7127659574468, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=34.9673202614379, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24642822, Length=387, Percent_Identity=31.266149870801, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=30.1123595505618, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=30.1123595505618, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=30.9659090909091, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=31.2328767123288, Blast_Score=159, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24666101, Length=369, Percent_Identity=32.2493224932249, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24668515, Length=324, Percent_Identity=29.6296296296296, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24643725, Length=379, Percent_Identity=26.9129287598945, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI20130173, Length=340, Percent_Identity=30.5882352941176, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI19920478, Length=361, Percent_Identity=30.1939058171745, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI17136666, Length=409, Percent_Identity=27.3838630806846, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24640164, Length=357, Percent_Identity=21.2885154061625, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50266; Mature: 50135

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGSGKTAAFGLGLL
CCCCCEEECHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEHG
HHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCC
AHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPALDAIIEQAPRERQTLL
CEEEEECCHHHHHHHCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHCCCCCCEEE
FSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQALQLLLLEHKP
EECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVA
CCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCHHHCCHHHHHHHHCCCCEEEEEEECHH
ARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLE
HCCCCHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHH
REITSESLPSESLLGSTPAAPTMITLQIDGGKKEKLRPGDILGALTGENGIEGSQVGKIQ
HHHHHHCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCEEE
VTDYRAYVAVNRKVAKKALNKLTGGRIKGKSYRAWPMK
EEEEEEEEEECHHHHHHHHHHHCCCEECCCCCCCCCCC
>Mature Secondary Structure 
AFSTLKLKPELLENLSSMGYNEMTPIQAQSLPPILAGQDVIGQGKTGSGKTAAFGLGLL
CCCCEEECHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEHG
HHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCC
AHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPALDAIIEQAPRERQTLL
CEEEEECCHHHHHHHCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHCCCCCCEEE
FSATFPEQIQSIAKQIMYDPSMVKVEGNHDSLSIAQHFYHLDDDKARMQALQLLLLEHKP
EECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
ESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVA
CCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCHHHCCHHHHHHHHCCCCEEEEEEECHH
ARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLE
HCCCCHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHH
REITSESLPSESLLGSTPAAPTMITLQIDGGKKEKLRPGDILGALTGENGIEGSQVGKIQ
HHHHHHCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCEEE
VTDYRAYVAVNRKVAKKALNKLTGGRIKGKSYRAWPMK
EEEEEEEEEECHHHHHHHHHHHCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]