Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yhhW [C]

Identifier: 120597663

GI number: 120597663

Start: 935514

End: 936401

Strand: Direct

Name: yhhW [C]

Synonym: Sputw3181_0833

Alternate gene names: 120597663

Gene position: 935514-936401 (Clockwise)

Preceding gene: 120597662

Following gene: 120597664

Centisome position: 19.87

GC content: 49.44

Gene sequence:

>888_bases
ATGAAAGTATTAAGTCAGTTTTCCGCCAAAGCCGCGATGGATGGCGATGGGGTCAATATTCGCCGTGTCGCCGATTTTGT
GACGACTAAATTTGATCCTTTCTTGATGATCGACGAAATAAAATCCGATGATGAACAAGATTTTATTGGCGGCTTCCCCG
CACATCCCCATCGCGGGATGGAGACCTTCACTTATATTCGTAAGGGCGGTTTTGAGCATCGCGACCAAATGGGTAATGTG
AAGGCGATTCGTGCCGGCGATGTGCAGTGGATGAGCACCGGGTTCGGAGTAGTACACTCTGAAATGCCGCTGGCCGATGC
AGTTGATGGTCTGCATGGATTCCAAATTTGGGTCAATATGCCCGCCAAAGACAAGCTGCGCCCTGCGAAGTATCAAGATA
CTGCGGGTAGCGCGAGCGTTGAAGCGACCAATGATACTGGCGCAACCTTGAAAGCCTTAGCGGGTGATTGGGGCTTTAAA
GATCAGCCGCTTATTAGTGCGGCTATTCAAGGATTAGCGGGTGAGGCTGCTATTGCTGATTTAAGTCTATCGCCAAATGC
TGAGGCCACGCTCGATTTGTCTCAACATGAGTTTGTCGCCTTGTACCTTTACCAAGGTGGCTTATATAAAAGCGATTCGA
GTAAGGGTGAGGATTCACACTGGTCATCTGCTTCAAATCAACATCATCAGGGCGAGTTTTTAGTGCTCGATAGCCAAAGT
GTGCTTAAGCTTAAAGCCGATGAGCGCGGCGCTGGGATGTTACTATTTGCGGGTAAACCTATCCGTGAAAAAATCGTCCA
GATGGGGCCCTTTGTGATGAACACCCAAGCGGAAATTCAGCAGGCGATCCGCGATTATCAAGAAGGGCGTTTCGGCCAGA
TCGCGTAA

Upstream 100 bases:

>100_bases
TTGTTATTCTGCCTCCATCAGCAAAGCGTTTGCGTCTTGTGTTAGCCGTATGATCTTGGCGTTTCACGTATCGCTTTGCT
CAACCGATAGGAGAGCAGCA

Downstream 100 bases:

>100_bases
TTTGTTAAATCTGCCGTGCTGAGCTAATTCTAAATCCAAGCCTAAATTTAAGTTTAAGCCCTGTATTCCTACAGGGCTTT
TTGTTGCTGTTCACGCAAGC

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein VC_A0969 [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV
KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEATNDTGATLKALAGDWGFK
DQPLISAAIQGLAGEAAIADLSLSPNAEATLDLSQHEFVALYLYQGGLYKSDSSKGEDSHWSSASNQHHQGEFLVLDSQS
VLKLKADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA

Sequences:

>Translated_295_residues
MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV
KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEATNDTGATLKALAGDWGFK
DQPLISAAIQGLAGEAAIADLSLSPNAEATLDLSQHEFVALYLYQGGLYKSDSSKGEDSHWSSASNQHHQGEFLVLDSQS
VLKLKADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA
>Mature_295_residues
MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV
KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEATNDTGATLKALAGDWGFK
DQPLISAAIQGLAGEAAIADLSLSPNAEATLDLSQHEFVALYLYQGGLYKSDSSKGEDSHWSSASNQHHQGEFLVLDSQS
VLKLKADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=296, Percent_Identity=30.4054054054054, Blast_Score=141, Evalue=6e-34,
Organism=Homo sapiens, GI4505823, Length=296, Percent_Identity=30.4054054054054, Blast_Score=141, Evalue=6e-34,
Organism=Escherichia coli, GI1789847, Length=105, Percent_Identity=38.0952380952381, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 32202; Mature: 32202

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGM
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCH
ETFTYIRKGGFEHRDQMGNVKAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNM
HHHHHHHHCCCCHHHHCCCEEEEECCCEEEEECCCCEEECCCCHHHHHCCCCEEEEEEEC
PAKDKLRPAKYQDTAGSASVEATNDTGATLKALAGDWGFKDQPLISAAIQGLAGEAAIAD
CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEE
LSLSPNAEATLDLSQHEFVALYLYQGGLYKSDSSKGEDSHWSSASNQHHQGEFLVLDSQS
EECCCCCCEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC
VLKLKADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA
EEEEECCCCCCEEEEECCCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGM
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCH
ETFTYIRKGGFEHRDQMGNVKAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNM
HHHHHHHHCCCCHHHHCCCEEEEECCCEEEEECCCCEEECCCCHHHHHCCCCEEEEEEEC
PAKDKLRPAKYQDTAGSASVEATNDTGATLKALAGDWGFKDQPLISAAIQGLAGEAAIAD
CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEE
LSLSPNAEATLDLSQHEFVALYLYQGGLYKSDSSKGEDSHWSSASNQHHQGEFLVLDSQS
EECCCCCCEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC
VLKLKADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGQIA
EEEEECCCCCCEEEEECCCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]