Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is pld [H]

Identifier: 120597590

GI number: 120597590

Start: 843234

End: 844997

Strand: Direct

Name: pld [H]

Synonym: Sputw3181_0759

Alternate gene names: 120597590

Gene position: 843234-844997 (Clockwise)

Preceding gene: 120597587

Following gene: 120597591

Centisome position: 17.91

GC content: 48.53

Gene sequence:

>1764_bases
ATGAATCGTACCGTGACTCGTCGTGATTTTCTGGCTATGTCGGCCAAAGGTGTTGGCGTTGCTGTTATTTCCTACGGCTT
GATGGGCTGTAGTGATAATGATGATAATGCTGTCCCCGCGCAATTTCTTCATGGGGTAGCCAGCGGCGATCCAGCCCATG
ATGCCGTTATCCTATGGACTCGTGTAACACCCGAGTCACAAGGTGATGTGAAAGTGAGTTGGCAAGTGGCGAGTGATGCG
GCGTTTTCACAGTTAGTCACCACGGGTGAAATGGTGACTAATGCCAGCCGTGATTACACGGTTAAAGTGGATGCCCGTGG
TTTACGTGCAGGGCAACACTATTTTTACCGCTTTAAGACGGGGGATAAAACTTCAGCGTTAGGTCAAACCCAAACTTTGC
CAGAAGGTGAAGTCAGCTCAGTAAAGTTAGCCGTACTTTCTTGTTCTAATTTCCCTGCGGGTTACTTTAACGTGTATGAG
TTAGCGGCGGCGCAGACCGATTTAGCTGCTGTGGTGCACTTAGGGGATTACATTTACGAATATCCTCGCGGTGGTTATGC
CAGTGAACATGCGGCAGAATTGGGCCGAGAAGTGCTTCCCGCCAATGAGTTATTGAGCTTAAGCGATTATCGTACCCGTT
ATGGCCAGTACCGCACCGATGCGAGTTTGCAAAAATTACATGCCAAAGTGCCTTTTATCACGGTATGGGATGACCATGAA
GTCGCTAACGATACCTGGCGTGATGGTGCTGAAAATCACAACGAAGATGAAGGGGATTTTACTGCTCGTAAAGAAGCGGC
ATTACAGGCTTATTTTGAGTGGCTGCCCATTCGCCCGTGGCGTGAAGGCAACCATGAGGAGATTTACCGCAGCTTTAGTT
ACGGTAACTTAGTGGATTTACATATGCTCGATACTCGCGTGTTAGCGCGGGATAAACAGCTCGATTATGCTGATTATATG
GATGCCACTACAGGCACCTTTGATGGCGAGCGTTTTCTTACGGATGTGACATCAACCTCGCGCACGTTATTAGGTTTGAC
ACAGTTATTATGGTTGCAAGGTACATTATTACAGGCAACGGGTAAGTGGCAGGTGTTAGGTCAGCAAGTGTTAATGGGTA
AAATGTCATTACCTGCGGCGATTGCGACTCAGCAGATGAGCATTCCCCAATTTGCTATGTTAGGGGCTTTAGCTAAGTTA
GCGGCGCGTGCAGCGGCCAATGATCCCACCTTAACGGCCCAAGAATTACAATATCTCCAAGCCAACCAAGCCTTATTAAC
CCCAGAAGTGATAGCCCTGCTGCAATTGCCATCGATTCCCTATAACTTGGATGCCTGGGATGGTTATGCCTATGAGCGTG
AAGTGATTTTAGGTACGGCTAAATCGAAAAATCTCAACCTAGTGGTGATTGCGGGTGATACCCATAACGCTTGGGCGAGT
GAGCTTAAAGATATGAAGGGCGATACTGTTGGTGTGGAGTTTGCGACGAGTTCGGTATCCTCGCCGGGGCTTGAGTATTA
TTTGAATCTCCCTGCAGAACAGATCCCGGCAACCGAAGCGGCGATTGTCGAGTTAGTGCCAGATCTTAAGTACACCAACT
TAAAAGACCGCGGCTTTATGACGCTGACATTCACTCCCGATGCGGTGCGCAGCGATTGGCATTATGTGGACACGATTTTG
TCGAAGGATTTCCAACTTGCAACGGCGCGTAGTTACAGTGCGGTGACGAAAGCAGGTGAGCACACGATTAATCCTGTGAG
TTAA

Upstream 100 bases:

>100_bases
ATTAGGATGTCACCAATATGTAACAGTTATGTCCCACAATCTTGGCCTCATTAGACCTCATACCTGTAAATGTGAAGCGT
AATCTAACAAGGGAATAATA

Downstream 100 bases:

>100_bases
TGCCTTGGCGTGTTCTATGTTGGCTACCTTAGGGTGGCCTTTTTTGTTAGTTTCATCCTAAAAATACAAAATAAATGGCT
GTTACCGCCCAAGTTCTTAT

Product: alkaline phosphatase

Products: NA

Alternate protein names: PLD [H]

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWTRVTPESQGDVKVSWQVASDA
AFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKTGDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYE
LAAAQTDLAAVVHLGDYIYEYPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE
VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADYM
DATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQATGKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKL
AARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS
ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFMTLTFTPDAVRSDWHYVDTIL
SKDFQLATARSYSAVTKAGEHTINPVS

Sequences:

>Translated_587_residues
MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWTRVTPESQGDVKVSWQVASDA
AFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKTGDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYE
LAAAQTDLAAVVHLGDYIYEYPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE
VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADYM
DATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQATGKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKL
AARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS
ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFMTLTFTPDAVRSDWHYVDTIL
SKDFQLATARSYSAVTKAGEHTINPVS
>Mature_587_residues
MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWTRVTPESQGDVKVSWQVASDA
AFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKTGDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYE
LAAAQTDLAAVVHLGDYIYEYPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE
VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADYM
DATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQATGKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKL
AARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS
ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFMTLTFTPDAVRSDWHYVDTIL
SKDFQLATARSYSAVTKAGEHTINPVS

Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 64666; Mature: 64666

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWT
CCCCCCHHHHHEECCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEE
RVTPESQGDVKVSWQVASDAAFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKT
EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEC
GDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYELAAAQTDLAAVVHLGDYIYE
CCCCHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCC
VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDL
CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE
HMLDTRVLARDKQLDYADYMDATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQAT
EEHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECC
GKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKLAARAAANDPTLTAQELQYLQ
CCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHH
ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFM
HHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCEE
TLTFTPDAVRSDWHYVDTILSKDFQLATARSYSAVTKAGEHTINPVS
EEEECCHHHHCCHHHHHHHHCCCCEEEHHCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWT
CCCCCCHHHHHEECCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEE
RVTPESQGDVKVSWQVASDAAFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKT
EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEC
GDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYELAAAQTDLAAVVHLGDYIYE
CCCCHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCC
VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDL
CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE
HMLDTRVLARDKQLDYADYMDATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQAT
EEHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECC
GKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKLAARAAANDPTLTAQELQYLQ
CCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHH
ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFM
HHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCEE
TLTFTPDAVRSDWHYVDTILSKDFQLATARSYSAVTKAGEHTINPVS
EEEECCHHHHCCHHHHHHHHCCCCEEEHHCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12441393 [H]