| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is pld [H]
Identifier: 120597590
GI number: 120597590
Start: 843234
End: 844997
Strand: Direct
Name: pld [H]
Synonym: Sputw3181_0759
Alternate gene names: 120597590
Gene position: 843234-844997 (Clockwise)
Preceding gene: 120597587
Following gene: 120597591
Centisome position: 17.91
GC content: 48.53
Gene sequence:
>1764_bases ATGAATCGTACCGTGACTCGTCGTGATTTTCTGGCTATGTCGGCCAAAGGTGTTGGCGTTGCTGTTATTTCCTACGGCTT GATGGGCTGTAGTGATAATGATGATAATGCTGTCCCCGCGCAATTTCTTCATGGGGTAGCCAGCGGCGATCCAGCCCATG ATGCCGTTATCCTATGGACTCGTGTAACACCCGAGTCACAAGGTGATGTGAAAGTGAGTTGGCAAGTGGCGAGTGATGCG GCGTTTTCACAGTTAGTCACCACGGGTGAAATGGTGACTAATGCCAGCCGTGATTACACGGTTAAAGTGGATGCCCGTGG TTTACGTGCAGGGCAACACTATTTTTACCGCTTTAAGACGGGGGATAAAACTTCAGCGTTAGGTCAAACCCAAACTTTGC CAGAAGGTGAAGTCAGCTCAGTAAAGTTAGCCGTACTTTCTTGTTCTAATTTCCCTGCGGGTTACTTTAACGTGTATGAG TTAGCGGCGGCGCAGACCGATTTAGCTGCTGTGGTGCACTTAGGGGATTACATTTACGAATATCCTCGCGGTGGTTATGC CAGTGAACATGCGGCAGAATTGGGCCGAGAAGTGCTTCCCGCCAATGAGTTATTGAGCTTAAGCGATTATCGTACCCGTT ATGGCCAGTACCGCACCGATGCGAGTTTGCAAAAATTACATGCCAAAGTGCCTTTTATCACGGTATGGGATGACCATGAA GTCGCTAACGATACCTGGCGTGATGGTGCTGAAAATCACAACGAAGATGAAGGGGATTTTACTGCTCGTAAAGAAGCGGC ATTACAGGCTTATTTTGAGTGGCTGCCCATTCGCCCGTGGCGTGAAGGCAACCATGAGGAGATTTACCGCAGCTTTAGTT ACGGTAACTTAGTGGATTTACATATGCTCGATACTCGCGTGTTAGCGCGGGATAAACAGCTCGATTATGCTGATTATATG GATGCCACTACAGGCACCTTTGATGGCGAGCGTTTTCTTACGGATGTGACATCAACCTCGCGCACGTTATTAGGTTTGAC ACAGTTATTATGGTTGCAAGGTACATTATTACAGGCAACGGGTAAGTGGCAGGTGTTAGGTCAGCAAGTGTTAATGGGTA AAATGTCATTACCTGCGGCGATTGCGACTCAGCAGATGAGCATTCCCCAATTTGCTATGTTAGGGGCTTTAGCTAAGTTA GCGGCGCGTGCAGCGGCCAATGATCCCACCTTAACGGCCCAAGAATTACAATATCTCCAAGCCAACCAAGCCTTATTAAC CCCAGAAGTGATAGCCCTGCTGCAATTGCCATCGATTCCCTATAACTTGGATGCCTGGGATGGTTATGCCTATGAGCGTG AAGTGATTTTAGGTACGGCTAAATCGAAAAATCTCAACCTAGTGGTGATTGCGGGTGATACCCATAACGCTTGGGCGAGT GAGCTTAAAGATATGAAGGGCGATACTGTTGGTGTGGAGTTTGCGACGAGTTCGGTATCCTCGCCGGGGCTTGAGTATTA TTTGAATCTCCCTGCAGAACAGATCCCGGCAACCGAAGCGGCGATTGTCGAGTTAGTGCCAGATCTTAAGTACACCAACT TAAAAGACCGCGGCTTTATGACGCTGACATTCACTCCCGATGCGGTGCGCAGCGATTGGCATTATGTGGACACGATTTTG TCGAAGGATTTCCAACTTGCAACGGCGCGTAGTTACAGTGCGGTGACGAAAGCAGGTGAGCACACGATTAATCCTGTGAG TTAA
Upstream 100 bases:
>100_bases ATTAGGATGTCACCAATATGTAACAGTTATGTCCCACAATCTTGGCCTCATTAGACCTCATACCTGTAAATGTGAAGCGT AATCTAACAAGGGAATAATA
Downstream 100 bases:
>100_bases TGCCTTGGCGTGTTCTATGTTGGCTACCTTAGGGTGGCCTTTTTTGTTAGTTTCATCCTAAAAATACAAAATAAATGGCT GTTACCGCCCAAGTTCTTAT
Product: alkaline phosphatase
Products: NA
Alternate protein names: PLD [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWTRVTPESQGDVKVSWQVASDA AFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKTGDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYE LAAAQTDLAAVVHLGDYIYEYPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADYM DATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQATGKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKL AARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFMTLTFTPDAVRSDWHYVDTIL SKDFQLATARSYSAVTKAGEHTINPVS
Sequences:
>Translated_587_residues MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWTRVTPESQGDVKVSWQVASDA AFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKTGDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYE LAAAQTDLAAVVHLGDYIYEYPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADYM DATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQATGKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKL AARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFMTLTFTPDAVRSDWHYVDTIL SKDFQLATARSYSAVTKAGEHTINPVS >Mature_587_residues MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWTRVTPESQGDVKVSWQVASDA AFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKTGDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYE LAAAQTDLAAVVHLGDYIYEYPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADYM DATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQATGKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKL AARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFMTLTFTPDAVRSDWHYVDTIL SKDFQLATARSYSAVTKAGEHTINPVS
Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward
COG id: COG3540
COG function: function code P; Phosphodiesterase/alkaline phosphatase D
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PhoD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018946 - InterPro: IPR006311 [H]
Pfam domain/function: PF09423 PhoD [H]
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 64666; Mature: 64666
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWT CCCCCCHHHHHEECCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEE RVTPESQGDVKVSWQVASDAAFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKT EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEC GDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYELAAAQTDLAAVVHLGDYIYE CCCCHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCC VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDL CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE HMLDTRVLARDKQLDYADYMDATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQAT EEHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECC GKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKLAARAAANDPTLTAQELQYLQ CCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHH ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFM HHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCEE TLTFTPDAVRSDWHYVDTILSKDFQLATARSYSAVTKAGEHTINPVS EEEECCHHHHCCHHHHHHHHCCCCEEEHHCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDNDDNAVPAQFLHGVASGDPAHDAVILWT CCCCCCHHHHHEECCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEE RVTPESQGDVKVSWQVASDAAFSQLVTTGEMVTNASRDYTVKVDARGLRAGQHYFYRFKT EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEC GDKTSALGQTQTLPEGEVSSVKLAVLSCSNFPAGYFNVYELAAAQTDLAAVVHLGDYIYE CCCCHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YPRGGYASEHAAELGREVLPANELLSLSDYRTRYGQYRTDASLQKLHAKVPFITVWDDHE CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCC VANDTWRDGAENHNEDEGDFTARKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDL CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE HMLDTRVLARDKQLDYADYMDATTGTFDGERFLTDVTSTSRTLLGLTQLLWLQGTLLQAT EEHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECC GKWQVLGQQVLMGKMSLPAAIATQQMSIPQFAMLGALAKLAARAAANDPTLTAQELQYLQ CCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWAS CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHH ELKDMKGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGFM HHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCEE TLTFTPDAVRSDWHYVDTILSKDFQLATARSYSAVTKAGEHTINPVS EEEECCHHHHCCHHHHHHHHCCCCEEEHHCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12441393 [H]