Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597584

Identifier: 120597584

GI number: 120597584

Start: 837615

End: 838097

Strand: Direct

Name: 120597584

Synonym: Sputw3181_0753

Alternate gene names: NA

Gene position: 837615-838097 (Clockwise)

Preceding gene: 120597581

Following gene: 120597585

Centisome position: 17.79

GC content: 45.55

Gene sequence:

>483_bases
ATGCAGACCGCAGATGAATTTATTGAACATTTAGCACTAGAGCAGCACATTGAAGGTGGATATTACCGCTCATCCTACCG
TTCTGATATGCTGTTTGATGACAATCGTGCACTATGGAGCAGCATTTATTTTCTACTGCGAACGGGGGAAGTGTCGCATT
TTCATCGCCTCACGGCTGACGAGATGTGGTATTTCCATGCGGGGCAATCATTGACGATTTATATGATTTCTCCCGATGGC
GAATTAACGACCGCGCAATTAGGGCTCGATTTAGCGGCGGGTGAGCGCCCACAGTTTTTAGTGCCTAAGGGCTGTATTTT
TGGTTCAGCCATGAATCAAGCGGGATTTTCACTGGTGGGTTGTATGGTGTCCCCTGGGTTTACCTTCGAAGATTTCGAGT
TATTTAGCCAAGAAACATTGTTAGCGCAATATCCGCAGCATAGAGATATTATTCTGCGACTTAGTAGAAGTGAGCACTGT
TAA

Upstream 100 bases:

>100_bases
GTTATTATTTGATGTGGATCGTGTTTTTAACATCTTTTTAAAACACGTATAAACGAGATGATAAAAATTTGATTAGGATC
TTTTTTCAGAGGTATTGAGT

Downstream 100 bases:

>100_bases
AGTTTAATTGTTAACATGACCTAGGTTGTTGGGCATAAAACAACCTTATTGTGCTGGATATTCCAATAATGGCGTAATAG
GACTTGTCTATTAGTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MQTADEFIEHLALEQHIEGGYYRSSYRSDMLFDDNRALWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPDG
ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQAGFSLVGCMVSPGFTFEDFELFSQETLLAQYPQHRDIILRLSRSEHC

Sequences:

>Translated_160_residues
MQTADEFIEHLALEQHIEGGYYRSSYRSDMLFDDNRALWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPDG
ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQAGFSLVGCMVSPGFTFEDFELFSQETLLAQYPQHRDIILRLSRSEHC
>Mature_160_residues
MQTADEFIEHLALEQHIEGGYYRSSYRSDMLFDDNRALWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPDG
ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQAGFSLVGCMVSPGFTFEDFELFSQETLLAQYPQHRDIILRLSRSEHC

Specific function: Unknown

COG id: COG3542

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18288; Mature: 18288

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTADEFIEHLALEQHIEGGYYRSSYRSDMLFDDNRALWSSIYFLLRTGEVSHFHRLTAD
CCCHHHHHHHHHHHHHHCCCEECCCCCCCCEECCCHHHHHHHHHHHCCCCHHHHHHCCHH
EMWYFHAGQSLTIYMISPDGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQAGFSLVG
HEEEEECCCEEEEEEECCCCCEEEHEECEEECCCCCCCEECCCCCEECCHHCCCCHHEEH
CMVSPGFTFEDFELFSQETLLAQYPQHRDIILRLSRSEHC
HHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MQTADEFIEHLALEQHIEGGYYRSSYRSDMLFDDNRALWSSIYFLLRTGEVSHFHRLTAD
CCCHHHHHHHHHHHHHHCCCEECCCCCCCCEECCCHHHHHHHHHHHCCCCHHHHHHCCHH
EMWYFHAGQSLTIYMISPDGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQAGFSLVG
HEEEEECCCEEEEEEECCCCCEEEHEECEEECCCCCCCEECCCCCEECCHHCCCCHHEEH
CMVSPGFTFEDFELFSQETLLAQYPQHRDIILRLSRSEHC
HHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA