| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is ctpC [H]
Identifier: 120597581
GI number: 120597581
Start: 832651
End: 834756
Strand: Direct
Name: ctpC [H]
Synonym: Sputw3181_0750
Alternate gene names: 120597581
Gene position: 832651-834756 (Clockwise)
Preceding gene: 120597580
Following gene: 120597584
Centisome position: 17.68
GC content: 46.11
Gene sequence:
>2106_bases ATGATGAACAATAATGCCGCAGTATTTAAAGCATTAGCTTTAGTCCACCATTGCACTAATCGGGTTCGATGGCGTTATTC TTTAGCAACGAATAGCCAAGAGCTCAAAGGTTTAGCATTGGCCATTGAGAATCTCGATGAGGTGTATTCTGCGAGGTTTA ATCCCAAAGCTCGTTCCTTAATTGTTAGCTATAACGCGTCTAAAATATCGATTGAGAAATTAGCCAGCCGAGTGCTACAG GTTAAGCCTGTCATTTTGGTTGCGGGTGATGGCCAAAATAAAGAGAGCCACCCCGCCCCCCAAAGACTGTTGCTGAATCT TGCGACATTAATCAGTGTGAATTTTTTACCTATATCGATGCGCTTGCCCGTCTCTCTATTGTCGGCATTGTCTGTGCTAA GGCATGGTGCTGAGGATGTTGTGAGTAAAGGGTTAACTTCTCATGCGCTAGAAGCCTTGGCCGTGACTATCTCCCTTGGC AGTGGTGATTATATTGCTGCTAATACCACAGCCTTTATGTTGGAGTTAGGCGAATACCTCGAAGACTCTATCGCTCGTCG ATCTGACGATATGCTGAAAACCTTGTTGCAGCCCTCGGATAAATTTGTATGGGTTGAACGCAGTGGTGTAGAAATCCAAG TGGCAACCAATGAAGTGGTTGTCGGCGATACCGTGATCGTGGGTGCAGGTGCTGTGCTGCCTGTAGACGGTACTGTGCTT GGGGGAGAGGCTTATGTTAATGAAGCCTCAATGACAGGCGAAAGTATGGCAACCCGGAAAAAACGGGGTGATACCGTATT GTCGGGTACGGTTGTGGAAGATGGCAGATTGAGGATCTACGCAGAGCATGTCGGTGTGGGAACCGCGGCGGCGCGTATTG CGGATTATGTCGAACAATCGCTCACAGCCAAAAGTGACGTCCAACTTCAGGCTTCATCATTAGCCGATAAATTGGTGCCC CGAGTACTCACATTAGCAGGTGCTACTTATTTAGTTTCTGGTAACTGGCAGCGCAGTGCCGCTGTTTTACAAGCCGATTA TTCCTGCGCATTAAAGCTCGCTACACCAGTGGCATTTAAATCGGCCATGTATCGTGCAGGTAAAAACGGGATTTTAATCA AAGGGGCTACAGCGTTAGAACGACTCGCTCAGGCAGACACTTTTATTTTTGATAAAACGGGTACGCTTACTAAAGGTAAT CTTGATGTGACCGACTCTGTGGCGTTTGATAGTACCTATTCTGCGAATGATTTGATCTGGCTGGCAGCCTCAGTAGAGGA GCACTATTTTCACCCGTTGGCCATGGCGGTAGTGGAGGCTTCACAAAGCATTGATGGTCGACATTTTGATCACTCTGAAG TGGAGTTTATCGTTTCCCACGGTGTGGCGAGTGAAATTGATGGGAAACGTATTGTTGTCGGTTCTCGGCATTTTATTGAA GAAGATGAGTGTATTGATGTAACACCTTATCTTACTGAAATTGAAAGATTATACAGTGAAGGTAAAACCTTACTTTATAT TGGATTTGGTGGTGTATTAATCGGTGTTTTAGCACTTAGGGATGCCATTCGTGATGAAAGCGCAGTAACCATACATCGCT TAAAGCAATTAGGGGTAAAACGAATACTGTTACTTACTGGCGATCAGCAGGATCGTGCCTTGGAGCTTGCCAAAGATCTT GGTATCGATGAAGTGTATGCAGAGCTATTGCCAGAAGATAAAGCCGAGATCATTGAGCGACTGAGTCAATCGGGGTGCAA TATTGCCTTTGTGGGGGATGGTATTAATGATGCGCCTGCGTTAGCGGGGGCTCATGTTGGTATTGCCATGCAAAAAGGGG CTGATATTGCGCGTTTATCCGCAGATATTGCGCTCTTGCAGGATGACATTACCCGAGTGGCCGATGCGAAGGAATTAGCG AATTTATCTATGGCACTTATCCATGATAACTACCAGTTAACACTGAGGGCTAACACAGGAATACTAGGCGCTGCTGCCGT TGGTTTACTCAGTCCTGTAGCGGCATCTATATTACACAATGGCACGACTATTGGTATTTTGCTCAATGCCTTACGGGGAA ATCGCCGCATAACTAATACGGCCTAA
Upstream 100 bases:
>100_bases CGTTCAGCCGTAAAACTGTATACCGATATTGCTGGCGGGATGGAAGAACTTAAAGAACAGGTTGCAGATATCCAAGCTGA AATGGCAGTCCAGACTGGTG
Downstream 100 bases:
>100_bases TATCATCGTTAGAAAGCAAGTTGATCGCGTTTTAGCCGTAAAAGCAAATACCCCTACAGGTGTTAGCTTTTACGGCTTTA TATTATACAGCGGGACAGAG
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MMNNNAAVFKALALVHHCTNRVRWRYSLATNSQELKGLALAIENLDEVYSARFNPKARSLIVSYNASKISIEKLASRVLQ VKPVILVAGDGQNKESHPAPQRLLLNLATLISVNFLPISMRLPVSLLSALSVLRHGAEDVVSKGLTSHALEALAVTISLG SGDYIAANTTAFMLELGEYLEDSIARRSDDMLKTLLQPSDKFVWVERSGVEIQVATNEVVVGDTVIVGAGAVLPVDGTVL GGEAYVNEASMTGESMATRKKRGDTVLSGTVVEDGRLRIYAEHVGVGTAAARIADYVEQSLTAKSDVQLQASSLADKLVP RVLTLAGATYLVSGNWQRSAAVLQADYSCALKLATPVAFKSAMYRAGKNGILIKGATALERLAQADTFIFDKTGTLTKGN LDVTDSVAFDSTYSANDLIWLAASVEEHYFHPLAMAVVEASQSIDGRHFDHSEVEFIVSHGVASEIDGKRIVVGSRHFIE EDECIDVTPYLTEIERLYSEGKTLLYIGFGGVLIGVLALRDAIRDESAVTIHRLKQLGVKRILLLTGDQQDRALELAKDL GIDEVYAELLPEDKAEIIERLSQSGCNIAFVGDGINDAPALAGAHVGIAMQKGADIARLSADIALLQDDITRVADAKELA NLSMALIHDNYQLTLRANTGILGAAAVGLLSPVAASILHNGTTIGILLNALRGNRRITNTA
Sequences:
>Translated_701_residues MMNNNAAVFKALALVHHCTNRVRWRYSLATNSQELKGLALAIENLDEVYSARFNPKARSLIVSYNASKISIEKLASRVLQ VKPVILVAGDGQNKESHPAPQRLLLNLATLISVNFLPISMRLPVSLLSALSVLRHGAEDVVSKGLTSHALEALAVTISLG SGDYIAANTTAFMLELGEYLEDSIARRSDDMLKTLLQPSDKFVWVERSGVEIQVATNEVVVGDTVIVGAGAVLPVDGTVL GGEAYVNEASMTGESMATRKKRGDTVLSGTVVEDGRLRIYAEHVGVGTAAARIADYVEQSLTAKSDVQLQASSLADKLVP RVLTLAGATYLVSGNWQRSAAVLQADYSCALKLATPVAFKSAMYRAGKNGILIKGATALERLAQADTFIFDKTGTLTKGN LDVTDSVAFDSTYSANDLIWLAASVEEHYFHPLAMAVVEASQSIDGRHFDHSEVEFIVSHGVASEIDGKRIVVGSRHFIE EDECIDVTPYLTEIERLYSEGKTLLYIGFGGVLIGVLALRDAIRDESAVTIHRLKQLGVKRILLLTGDQQDRALELAKDL GIDEVYAELLPEDKAEIIERLSQSGCNIAFVGDGINDAPALAGAHVGIAMQKGADIARLSADIALLQDDITRVADAKELA NLSMALIHDNYQLTLRANTGILGAAAVGLLSPVAASILHNGTTIGILLNALRGNRRITNTA >Mature_701_residues MMNNNAAVFKALALVHHCTNRVRWRYSLATNSQELKGLALAIENLDEVYSARFNPKARSLIVSYNASKISIEKLASRVLQ VKPVILVAGDGQNKESHPAPQRLLLNLATLISVNFLPISMRLPVSLLSALSVLRHGAEDVVSKGLTSHALEALAVTISLG SGDYIAANTTAFMLELGEYLEDSIARRSDDMLKTLLQPSDKFVWVERSGVEIQVATNEVVVGDTVIVGAGAVLPVDGTVL GGEAYVNEASMTGESMATRKKRGDTVLSGTVVEDGRLRIYAEHVGVGTAAARIADYVEQSLTAKSDVQLQASSLADKLVP RVLTLAGATYLVSGNWQRSAAVLQADYSCALKLATPVAFKSAMYRAGKNGILIKGATALERLAQADTFIFDKTGTLTKGN LDVTDSVAFDSTYSANDLIWLAASVEEHYFHPLAMAVVEASQSIDGRHFDHSEVEFIVSHGVASEIDGKRIVVGSRHFIE EDECIDVTPYLTEIERLYSEGKTLLYIGFGGVLIGVLALRDAIRDESAVTIHRLKQLGVKRILLLTGDQQDRALELAKDL GIDEVYAELLPEDKAEIIERLSQSGCNIAFVGDGINDAPALAGAHVGIAMQKGADIARLSADIALLQDDITRVADAKELA NLSMALIHDNYQLTLRANTGILGAAAVGLLSPVAASILHNGTTIGILLNALRGNRRITNTA
Specific function: Involved In Copper Efflux. [C]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily [H]
Homologues:
Organism=Homo sapiens, GI115529486, Length=572, Percent_Identity=28.4965034965035, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI55743071, Length=555, Percent_Identity=30.2702702702703, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI55743073, Length=525, Percent_Identity=30.6666666666667, Blast_Score=204, Evalue=2e-52, Organism=Escherichia coli, GI1786691, Length=555, Percent_Identity=33.8738738738739, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1789879, Length=643, Percent_Identity=30.1710730948678, Blast_Score=206, Evalue=5e-54, Organism=Escherichia coli, GI1786914, Length=447, Percent_Identity=29.5302013422819, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI2367363, Length=578, Percent_Identity=23.8754325259516, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17556548, Length=596, Percent_Identity=29.6979865771812, Blast_Score=185, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6320475, Length=511, Percent_Identity=29.3542074363992, Blast_Score=185, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319772, Length=490, Percent_Identity=25.9183673469388, Blast_Score=152, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6325221, Length=522, Percent_Identity=28.1609195402299, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6321430, Length=504, Percent_Identity=27.1825396825397, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321271, Length=187, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221329854, Length=219, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI281366617, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24668708, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24668704, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI161085803, Length=155, Percent_Identity=31.6129032258064, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24668696, Length=155, Percent_Identity=31.6129032258064, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 75128; Mature: 75128
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS01121 CASPASE_HIS ; PS00154 ATPASE_E1_E2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNNNAAVFKALALVHHCTNRVRWRYSLATNSQELKGLALAIENLDEVYSARFNPKARSL CCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE IVSYNASKISIEKLASRVLQVKPVILVAGDGQNKESHPAPQRLLLNLATLISVNFLPISM EEEECCCEEEHHHHHHHHHEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEE RLPVSLLSALSVLRHGAEDVVSKGLTSHALEALAVTISLGSGDYIAANTTAFMLELGEYL CCHHHHHHHHHHHHCCHHHHHHCCHHHHHHEEEEEEEEECCCCEEEECHHHHHHHHHHHH EDSIARRSDDMLKTLLQPSDKFVWVERSGVEIQVATNEVVVGDTVIVGAGAVLPVDGTVL HHHHHHCCHHHHHHHHCCCCCEEEEECCCEEEEEECCEEEECCEEEEECCEEEECCCEEE GGEAYVNEASMTGESMATRKKRGDTVLSGTVVEDGRLRIYAEHVGVGTAAARIADYVEQS CCHHHCCHHHCCCHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHH LTAKSDVQLQASSLADKLVPRVLTLAGATYLVSGNWQRSAAVLQADYSCALKLATPVAFK CCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHEEECCCCEEEEECCHHHHH SAMYRAGKNGILIKGATALERLAQADTFIFDKTGTLTKGNLDVTDSVAFDSTYSANDLIW HHHHHCCCCCEEEECHHHHHHHHHCCCEEEECCCCEECCCCCCCCCEEECCCCCCCCEEE LAASVEEHYFHPLAMAVVEASQSIDGRHFDHSEVEFIVSHGVASEIDGKRIVVGSRHFIE EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCC EDECIDVTPYLTEIERLYSEGKTLLYIGFGGVLIGVLALRDAIRDESAVTIHRLKQLGVK CCCCEECCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCE RILLLTGDQQDRALELAKDLGIDEVYAELLPEDKAEIIERLSQSGCNIAFVGDGINDAPA EEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCH LAGAHVGIAMQKGADIARLSADIALLQDDITRVADAKELANLSMALIHDNYQLTLRANTG HCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCC ILGAAAVGLLSPVAASILHNGTTIGILLNALRGNRRITNTA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCC >Mature Secondary Structure MMNNNAAVFKALALVHHCTNRVRWRYSLATNSQELKGLALAIENLDEVYSARFNPKARSL CCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE IVSYNASKISIEKLASRVLQVKPVILVAGDGQNKESHPAPQRLLLNLATLISVNFLPISM EEEECCCEEEHHHHHHHHHEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEE RLPVSLLSALSVLRHGAEDVVSKGLTSHALEALAVTISLGSGDYIAANTTAFMLELGEYL CCHHHHHHHHHHHHCCHHHHHHCCHHHHHHEEEEEEEEECCCCEEEECHHHHHHHHHHHH EDSIARRSDDMLKTLLQPSDKFVWVERSGVEIQVATNEVVVGDTVIVGAGAVLPVDGTVL HHHHHHCCHHHHHHHHCCCCCEEEEECCCEEEEEECCEEEECCEEEEECCEEEECCCEEE GGEAYVNEASMTGESMATRKKRGDTVLSGTVVEDGRLRIYAEHVGVGTAAARIADYVEQS CCHHHCCHHHCCCHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHH LTAKSDVQLQASSLADKLVPRVLTLAGATYLVSGNWQRSAAVLQADYSCALKLATPVAFK CCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHEEECCCCEEEEECCHHHHH SAMYRAGKNGILIKGATALERLAQADTFIFDKTGTLTKGNLDVTDSVAFDSTYSANDLIW HHHHHCCCCCEEEECHHHHHHHHHCCCEEEECCCCEECCCCCCCCCEEECCCCCCCCEEE LAASVEEHYFHPLAMAVVEASQSIDGRHFDHSEVEFIVSHGVASEIDGKRIVVGSRHFIE EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCC EDECIDVTPYLTEIERLYSEGKTLLYIGFGGVLIGVLALRDAIRDESAVTIHRLKQLGVK CCCCEECCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCE RILLLTGDQQDRALELAKDLGIDEVYAELLPEDKAEIIERLSQSGCNIAFVGDGINDAPA EEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCH LAGAHVGIAMQKGADIARLSADIALLQDDITRVADAKELANLSMALIHDNYQLTLRANTG HCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCC ILGAAAVGLLSPVAASILHNGTTIGILLNALRGNRRITNTA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]