| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597521
Identifier: 120597521
GI number: 120597521
Start: 769778
End: 770182
Strand: Direct
Name: 120597521
Synonym: Sputw3181_0690
Alternate gene names: NA
Gene position: 769778-770182 (Clockwise)
Preceding gene: 120597520
Following gene: 120597527
Centisome position: 16.35
GC content: 43.46
Gene sequence:
>405_bases ATGTATAACACAGCAAAGAAACAAGTTTGGTATGGTGAGCTGAGAACATCGAAAGGCAATGCGATTGTCGTCCATGACAA CCAACTGCCAGACGCCTCTCCTGGACGAATCTACCTATACAATACAGAGCGTGACGCCATTGTTGAGTACGTGGAAGATA TTGTTAAAGTGAACCTATATGACTTAGATGAGGCTGCGTTAAAAGCTGCTGAGGCTAAGTTTGGTGGAGCATGGAAAGCG GCTAGATCTCAATTTATGAGCAAACATCAAGCTCGTATTGATCTTAATAATGTCAAAGAGACCGCTCCTGTACGTAAGGC GAAGCCTGAAGTTGAGCCTGAAATTGAAACCGATGCTATCGGTGCAGATTTTGATGATGACTGGGGCGATGATTTTGATG ATTAA
Upstream 100 bases:
>100_bases AGACAATCCGGCGCTATTTGTGGATCAAAGCAAGCGACACTTCGCTTATTCAGACTAAAAAACTCATGGTGTATGTGTTG ATTTAAGGGTATTGGCATAT
Downstream 100 bases:
>100_bases CACAGTGTTGGCCTAGAGCCAAATGCTGTAAGGAATAAAATAGCCATTATTTTATTCCTTATCCCTACCTTTTATATTTT TTCCAATCTGCTTTTCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MYNTAKKQVWYGELRTSKGNAIVVHDNQLPDASPGRIYLYNTERDAIVEYVEDIVKVNLYDLDEAALKAAEAKFGGAWKA ARSQFMSKHQARIDLNNVKETAPVRKAKPEVEPEIETDAIGADFDDDWGDDFDD
Sequences:
>Translated_134_residues MYNTAKKQVWYGELRTSKGNAIVVHDNQLPDASPGRIYLYNTERDAIVEYVEDIVKVNLYDLDEAALKAAEAKFGGAWKA ARSQFMSKHQARIDLNNVKETAPVRKAKPEVEPEIETDAIGADFDDDWGDDFDD >Mature_134_residues MYNTAKKQVWYGELRTSKGNAIVVHDNQLPDASPGRIYLYNTERDAIVEYVEDIVKVNLYDLDEAALKAAEAKFGGAWKA ARSQFMSKHQARIDLNNVKETAPVRKAKPEVEPEIETDAIGADFDDDWGDDFDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15124; Mature: 15124
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNTAKKQVWYGELRTSKGNAIVVHDNQLPDASPGRIYLYNTERDAIVEYVEDIVKVNLY CCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC DLDEAALKAAEAKFGGAWKAARSQFMSKHQARIDLNNVKETAPVRKAKPEVEPEIETDAI CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC GADFDDDWGDDFDD CCCCCCCCCCCCCC >Mature Secondary Structure MYNTAKKQVWYGELRTSKGNAIVVHDNQLPDASPGRIYLYNTERDAIVEYVEDIVKVNLY CCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC DLDEAALKAAEAKFGGAWKAARSQFMSKHQARIDLNNVKETAPVRKAKPEVEPEIETDAI CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC GADFDDDWGDDFDD CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA