| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597506
Identifier: 120597506
GI number: 120597506
Start: 746049
End: 746579
Strand: Direct
Name: 120597506
Synonym: Sputw3181_0675
Alternate gene names: NA
Gene position: 746049-746579 (Clockwise)
Preceding gene: 120597505
Following gene: 120597507
Centisome position: 15.85
GC content: 43.5
Gene sequence:
>531_bases ATGCTCAATTTTAATAAGTTATTACTTTGGATATTTTTGCTTATTGTGGAAATGCAAGTCTATGCTAGCGAACTCTGTTC TGGTATTGAAAACTCGGCTATTCAAGCGACCACACCGAGTAGTGAGTTTACTGATAATGGCGATGGCACAGTCACCCATC TAACCACTGGGCTAATCTGGCAGCGTTGCAGTTTGGGGCAAACGTGGGATGGCAGTTATTGTATAGATAATGCAACGACT TACAATTGGCCTGCATCTGCCCTGCAAGCCAAAGATAATCTATTTGCAGGCTATAGTGATTGGCGCTTGCCTAATAAAAA TGAACTGGCTTCAATTATTGAATACCGCTGTCATCACCCTGCAATTAATAGCCAAATATTTCCCAATACGTCACCTAGTG GATATTGGTCGTCTTCGCACAGTTCCAACTATGGTAATCACACATCGTGGATCGTTGAATTCAACAGTGGTAGCGTCTAC CTCGACGTTAGGTTCCACTATTACCACGTCCGTTTGGTGCGAGGCGGATAG
Upstream 100 bases:
>100_bases TAGCAGAAATACTGTTTTTCAAAAGGTTGCAACAGGTGGAAAAGGCCCTAGCTTCGTAGTATTGCTAAAACAGGATGCTT TTGTTTAAGGAAATATGTTA
Downstream 100 bases:
>100_bases TAATTAGCTTTTGACCTGTGGTGTTGTAATTAAGGCTTATCAGTGGTGAGCCGTATGACTAAAACTAAACTCATCACTTT AGTCGTTCCACTCACGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLNFNKLLLWIFLLIVEMQVYASELCSGIENSAIQATTPSSEFTDNGDGTVTHLTTGLIWQRCSLGQTWDGSYCIDNATT YNWPASALQAKDNLFAGYSDWRLPNKNELASIIEYRCHHPAINSQIFPNTSPSGYWSSSHSSNYGNHTSWIVEFNSGSVY LDVRFHYYHVRLVRGG
Sequences:
>Translated_176_residues MLNFNKLLLWIFLLIVEMQVYASELCSGIENSAIQATTPSSEFTDNGDGTVTHLTTGLIWQRCSLGQTWDGSYCIDNATT YNWPASALQAKDNLFAGYSDWRLPNKNELASIIEYRCHHPAINSQIFPNTSPSGYWSSSHSSNYGNHTSWIVEFNSGSVY LDVRFHYYHVRLVRGG >Mature_176_residues MLNFNKLLLWIFLLIVEMQVYASELCSGIENSAIQATTPSSEFTDNGDGTVTHLTTGLIWQRCSLGQTWDGSYCIDNATT YNWPASALQAKDNLFAGYSDWRLPNKNELASIIEYRCHHPAINSQIFPNTSPSGYWSSSHSSNYGNHTSWIVEFNSGSVY LDVRFHYYHVRLVRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19884; Mature: 19884
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFNKLLLWIFLLIVEMQVYASELCSGIENSAIQATTPSSEFTDNGDGTVTHLTTGLIW CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHH QRCSLGQTWDGSYCIDNATTYNWPASALQAKDNLFAGYSDWRLPNKNELASIIEYRCHHP HHCCCCCCCCCCEEECCCEECCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCC AINSQIFPNTSPSGYWSSSHSSNYGNHTSWIVEFNSGSVYLDVRFHYYHVRLVRGG CCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEECC >Mature Secondary Structure MLNFNKLLLWIFLLIVEMQVYASELCSGIENSAIQATTPSSEFTDNGDGTVTHLTTGLIW CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHH QRCSLGQTWDGSYCIDNATTYNWPASALQAKDNLFAGYSDWRLPNKNELASIIEYRCHHP HHCCCCCCCCCCEEECCCEECCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCC AINSQIFPNTSPSGYWSSSHSSNYGNHTSWIVEFNSGSVYLDVRFHYYHVRLVRGG CCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA