| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is plsC [H]
Identifier: 120597464
GI number: 120597464
Start: 689829
End: 690614
Strand: Direct
Name: plsC [H]
Synonym: Sputw3181_0633
Alternate gene names: 120597464
Gene position: 689829-690614 (Clockwise)
Preceding gene: 120597463
Following gene: 120597465
Centisome position: 14.65
GC content: 42.62
Gene sequence:
>786_bases ATGCTGGCTATACTGTCGCCAATTTTATCGTTGGAGTATGCTGTGCTGTTAATCGTCAGATCTATGCTGTTGGCGGTGTC TTTGTTGCTTGCCTTTATTTTTGGTGGATTGGTGTGTTTACTCAGACCTCGACACCGTGACAATGTACATATGTTCGCCA AGATCTTCTCTTCTGTTGCACCGATCCTAGGGATAAAAGTGATCGTTCGTCGGCATAAAGAGGTGCAGGATGGCCCCTAT ATTTTCTTAGCAAATCATCAGAATAACTTCGATCTTTTTACTCACACTAAGGCCGTTCCTAAGGGCACGGTTAGCTTAGG TAAGAAAAGTTTGGTTTGGATGCCACTATTTGGCCAAATTTATTGGTTGTCGGGCAATATTCTCATCGATCGGAAAAATC GACACAGTGCCTTTGATACGATGGCGAAGACAGTTGAGAAAATTAAGCAAAAAAGTTTATCTGTATGGATTTTTCCTGAA GGCACCCGTTCTCGAGGACGTGGTTTATTACCCTTCAAGGCGGGGGCTTTTCATACAGCGATTGCAGCAGGTGTCCCAAT TGTGCCCGTGTTAGCTTCCTGTCAGAGCCATATTAATTTAAATCGTTGGGATAATGGGGTTGTTATTATCGAAATGATGG CGCCAATACCCACTGCGGATATAGACAAAGCGGATGTTAAAGCTTTTTCTGCACAAATTTATGACAGTATGTCGGCAAAA TTTAATGAGATAAACCGAGAAGCGGCAACATTAATGGGTAAAACTCCTATGGATGATGGCGTATAA
Upstream 100 bases:
>100_bases TTAAAGCCCATCAACACACTGTATTTACAATGAGTTGATGGGCTTTTTTTTGTTAGCGAATCGGCTTACAGATGTAAACA ATATATTGAGTCCATAGGCC
Downstream 100 bases:
>100_bases TAGCCTCAATTTGAGCCAGATTTATCTTAACGGAGACACGTTTATGTCTATTGAAAGTCAGTTAAAAGCACAACTTGCCG AGAATCGCGACATAGTGCAA
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLAILSPILSLEYAVLLIVRSMLLAVSLLLAFIFGGLVCLLRPRHRDNVHMFAKIFSSVAPILGIKVIVRRHKEVQDGPY IFLANHQNNFDLFTHTKAVPKGTVSLGKKSLVWMPLFGQIYWLSGNILIDRKNRHSAFDTMAKTVEKIKQKSLSVWIFPE GTRSRGRGLLPFKAGAFHTAIAAGVPIVPVLASCQSHINLNRWDNGVVIIEMMAPIPTADIDKADVKAFSAQIYDSMSAK FNEINREAATLMGKTPMDDGV
Sequences:
>Translated_261_residues MLAILSPILSLEYAVLLIVRSMLLAVSLLLAFIFGGLVCLLRPRHRDNVHMFAKIFSSVAPILGIKVIVRRHKEVQDGPY IFLANHQNNFDLFTHTKAVPKGTVSLGKKSLVWMPLFGQIYWLSGNILIDRKNRHSAFDTMAKTVEKIKQKSLSVWIFPE GTRSRGRGLLPFKAGAFHTAIAAGVPIVPVLASCQSHINLNRWDNGVVIIEMMAPIPTADIDKADVKAFSAQIYDSMSAK FNEINREAATLMGKTPMDDGV >Mature_261_residues MLAILSPILSLEYAVLLIVRSMLLAVSLLLAFIFGGLVCLLRPRHRDNVHMFAKIFSSVAPILGIKVIVRRHKEVQDGPY IFLANHQNNFDLFTHTKAVPKGTVSLGKKSLVWMPLFGQIYWLSGNILIDRKNRHSAFDTMAKTVEKIKQKSLSVWIFPE GTRSRGRGLLPFKAGAFHTAIAAGVPIVPVLASCQSHINLNRWDNGVVIIEMMAPIPTADIDKADVKAFSAQIYDSMSAK FNEINREAATLMGKTPMDDGV
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the 2 position. This enzyme can utilize either acyl-CoA or acyl-ACP as the fatty acyl donor [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=215, Percent_Identity=33.0232558139535, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI15100175, Length=215, Percent_Identity=33.0232558139535, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI6041665, Length=246, Percent_Identity=32.520325203252, Blast_Score=128, Evalue=4e-30, Organism=Escherichia coli, GI1789395, Length=237, Percent_Identity=47.6793248945148, Blast_Score=237, Evalue=6e-64, Organism=Caenorhabditis elegans, GI17564032, Length=201, Percent_Identity=33.8308457711443, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17568319, Length=238, Percent_Identity=31.5126050420168, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320151, Length=243, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=1e-33, Organism=Drosophila melanogaster, GI281364648, Length=269, Percent_Identity=27.1375464684015, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24582856, Length=269, Percent_Identity=27.1375464684015, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24582854, Length=269, Percent_Identity=27.1375464684015, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24641614, Length=216, Percent_Identity=30.5555555555556, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24641612, Length=216, Percent_Identity=30.5555555555556, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28923; Mature: 28923
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAILSPILSLEYAVLLIVRSMLLAVSLLLAFIFGGLVCLLRPRHRDNVHMFAKIFSSVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH PILGIKVIVRRHKEVQDGPYIFLANHQNNFDLFTHTKAVPKGTVSLGKKSLVWMPLFGQI HHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHCCCCCEEEEECCCEE YWLSGNILIDRKNRHSAFDTMAKTVEKIKQKSLSVWIFPEGTRSRGRGLLPFKAGAFHTA EEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHH IAAGVPIVPVLASCQSHINLNRWDNGVVIIEMMAPIPTADIDKADVKAFSAQIYDSMSAK HHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH FNEINREAATLMGKTPMDDGV HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLAILSPILSLEYAVLLIVRSMLLAVSLLLAFIFGGLVCLLRPRHRDNVHMFAKIFSSVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH PILGIKVIVRRHKEVQDGPYIFLANHQNNFDLFTHTKAVPKGTVSLGKKSLVWMPLFGQI HHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHCCCCCEEEEECCCEE YWLSGNILIDRKNRHSAFDTMAKTVEKIKQKSLSVWIFPEGTRSRGRGLLPFKAGAFHTA EEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHH IAAGVPIVPVLASCQSHINLNRWDNGVVIIEMMAPIPTADIDKADVKAFSAQIYDSMSAK HHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH FNEINREAATLMGKTPMDDGV HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1557036; 9278503 [H]