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The map label for this gene is bphB [H]

Identifier: 120597442

GI number: 120597442

Start: 668879

End: 671032

Strand: Direct

Name: bphB [H]

Synonym: Sputw3181_0611

Alternate gene names: 120597442

Gene position: 668879-671032 (Clockwise)

Preceding gene: 120597439

Following gene: 120597443

Centisome position: 14.21

GC content: 41.36

Gene sequence:

>2154_bases
ATGCACAAGGATGACTTTCCTAAATACTTTGACTCTCCTAAAAATTTTTATTTCAGCGTCCTAAGTTCCAGTTGGATGGT
GATCACGGCTGCATTGTTTTTCATGGGCGTTTCTTGGTATGTCTTAGAGGTATATCTTAGAGATCGCGGAGAAGAGCGTT
TTAATAATAATGTGCAGGAGCTAATTGAAGCCGTAAACAGCAGAATGATAGTGTATGAGCAGGTATTACGGGGGGGGATT
GGGTTATTTCTTGCCTCTGATGGCGTGACCAGAGAAGAGTGGCAGACCTACGTAGTAAATGCGCGTTTGATTGAATATTA
CCCAGGTATTCAAGGCTTTGGTTACACTCCCTTACTGACTCCTGAAACCTTGGAGGCGCATGTCAATCAAGTTCGAACTG
AAGGGTTTAGTGAATATAACGTTTATCCCCAAGGAGAGCGCGATCTCTATTGCGTCATTCAATACTTAGAGCCCTTTGAT
TGGCGTAACCAGAGGGCTTTTGGTTTTGACATGTGTTCAGAGACGAATCGACGCTCTGCCATACTCAGTTCTATAGCAAC
AGGGATGCCGACAATTTCAGGAAAGGTGATATTAGTTCAGGAAACCCAAGATAATACCCAATCGGGTTTTTTGATGTATT
TACCCTTATATCAAGGGCAAGCGACTACTGATGAGGAGCGAAAACAGCGTGCCGTCGGTGTAATTTATGCAGCTTTTCGC
ATGGATGATTTGATGCAAGGGATTATGGGAAATAGATTTTCGGGTTTAACACTCGCTATTTACGATGGGGAAAATGCAAA
CGCTGAAAGTTTAATGTTTACTAGCAATAAATTGTTACCTAGTCCGCAGGATCTTTTTTATCAATCACAAACGGCAATCA
TTGAAGGCCGAGTATGGCGTTTAGATATTTCGTCAGAATCAGCCTTTATTTCTAGTTCGGAGCAAACCCAGAGTTTTTGG
CTCCAATTGATTGGGTGCGGCTTTATATTAGCGTTATTTTACTCCGTGGTTGTGATGGCGCGTAATCGTTATCAAGAATC
TAGGTTGACATCTGAACTTATCGCCAACGAGAAACGATTTAGATTAGTCATTGAAGCCTCGCCAAGCGCCCTATTTATGA
TTGATAGAACAGGCGTGATCACTTTAGTCAATACTCATGCCGAACGCTTATTTGGTTATGCCAGAGAAGAATTGCTTGGG
CATTCAATCAATATGCTACTGCCTAAGGGATTGTGGGATATACATCAGCAGCATATGAGTAATTATTTGGTCCAGCCTAT
CGCAAAAAATATGTCTATGCGGGACGATTTATTTGGCTGTTGCAAGGATGGTAGCCGATTAGCGATTGAGGTTGGCTTAA
CACCAATCCATTTTAGTAATGGGCTCTCTATACTCGCGACAATCAATAATGTGTCAGAACGCAAACGTGTGGAAATTCAA
AGAGCTCAACATACAAAAGAACTTGAGCGTATTAATCAAGAACTCGATCGTTTTGCCTATATTGCATCCCATGATCTTAA
GTCTCCTTTAAGGGGGATTGAACAGTTGACGAGTTGGTTGGCGGAAGATCTTGTTGATAATACGAATGAAAATGTCCAAA
AGTACTTAGGATTAATTCAAAATCGGATTCATCGCATGGTCTTGCTACTCGATGGATTATTAATGTTTTCCAGAATTGGT
CGGGTTGATGCTGAAATTGTAGAGGTAGATGCGCGGCAGTTAATTGAGGATATGTTTGAGTTAGTCGCTCCTCCACAGGG
ATTTGAGTTATTGCTAGAGGGGGAATTCCCAAACTTTAAGACAGTCAAAACACTTTTGGAGTTGGTTGTTAGAAATTTAA
TGAGTAATGCCATAAAACACCACGATCGAGACACGGGTGTTATCAAAGTGCAATGTGAACCCAAAGGGGATGTATATTGG
TTTAGTGTTGTTGATGATGGCCCAGGTATTTCAAAGGCTTATCATGGGAAAGTATTTGAAATGTTTCAGACGCTTAAACC
AAGGGATGAAGTAGAGGGGAGTGGTTTAGGTTTATCACTGGTAAAAAAAACCATAGAAAGCTTAGGGGGAGAAATCAAAC
TAGAATCAGAGGGACGAGGTTGTCGTTTTCGATTCAGTTGGCCAGTACGTATAGTGAACAAGGAGGTTTTATGA

Upstream 100 bases:

>100_bases
ATTTATTGACTAATCCCTACTTAAATACTCAGACAAACTTGAATTAATTGACAACTACAACAACACTTTGATGATTAATG
ATTCGCTAGGGATGGCATAT

Downstream 100 bases:

>100_bases
GCAGTTCAAATAGCTACACTCAAGTGACAATTTTACTGGTCGATGACGATGATGTTGATTATATGGCTGTTCAGCGTGCA
ATGAAGCAGCTTCGCTTATT

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MHKDDFPKYFDSPKNFYFSVLSSSWMVITAALFFMGVSWYVLEVYLRDRGEERFNNNVQELIEAVNSRMIVYEQVLRGGI
GLFLASDGVTREEWQTYVVNARLIEYYPGIQGFGYTPLLTPETLEAHVNQVRTEGFSEYNVYPQGERDLYCVIQYLEPFD
WRNQRAFGFDMCSETNRRSAILSSIATGMPTISGKVILVQETQDNTQSGFLMYLPLYQGQATTDEERKQRAVGVIYAAFR
MDDLMQGIMGNRFSGLTLAIYDGENANAESLMFTSNKLLPSPQDLFYQSQTAIIEGRVWRLDISSESAFISSSEQTQSFW
LQLIGCGFILALFYSVVVMARNRYQESRLTSELIANEKRFRLVIEASPSALFMIDRTGVITLVNTHAERLFGYAREELLG
HSINMLLPKGLWDIHQQHMSNYLVQPIAKNMSMRDDLFGCCKDGSRLAIEVGLTPIHFSNGLSILATINNVSERKRVEIQ
RAQHTKELERINQELDRFAYIASHDLKSPLRGIEQLTSWLAEDLVDNTNENVQKYLGLIQNRIHRMVLLLDGLLMFSRIG
RVDAEIVEVDARQLIEDMFELVAPPQGFELLLEGEFPNFKTVKTLLELVVRNLMSNAIKHHDRDTGVIKVQCEPKGDVYW
FSVVDDGPGISKAYHGKVFEMFQTLKPRDEVEGSGLGLSLVKKTIESLGGEIKLESEGRGCRFRFSWPVRIVNKEVL

Sequences:

>Translated_717_residues
MHKDDFPKYFDSPKNFYFSVLSSSWMVITAALFFMGVSWYVLEVYLRDRGEERFNNNVQELIEAVNSRMIVYEQVLRGGI
GLFLASDGVTREEWQTYVVNARLIEYYPGIQGFGYTPLLTPETLEAHVNQVRTEGFSEYNVYPQGERDLYCVIQYLEPFD
WRNQRAFGFDMCSETNRRSAILSSIATGMPTISGKVILVQETQDNTQSGFLMYLPLYQGQATTDEERKQRAVGVIYAAFR
MDDLMQGIMGNRFSGLTLAIYDGENANAESLMFTSNKLLPSPQDLFYQSQTAIIEGRVWRLDISSESAFISSSEQTQSFW
LQLIGCGFILALFYSVVVMARNRYQESRLTSELIANEKRFRLVIEASPSALFMIDRTGVITLVNTHAERLFGYAREELLG
HSINMLLPKGLWDIHQQHMSNYLVQPIAKNMSMRDDLFGCCKDGSRLAIEVGLTPIHFSNGLSILATINNVSERKRVEIQ
RAQHTKELERINQELDRFAYIASHDLKSPLRGIEQLTSWLAEDLVDNTNENVQKYLGLIQNRIHRMVLLLDGLLMFSRIG
RVDAEIVEVDARQLIEDMFELVAPPQGFELLLEGEFPNFKTVKTLLELVVRNLMSNAIKHHDRDTGVIKVQCEPKGDVYW
FSVVDDGPGISKAYHGKVFEMFQTLKPRDEVEGSGLGLSLVKKTIESLGGEIKLESEGRGCRFRFSWPVRIVNKEVL
>Mature_717_residues
MHKDDFPKYFDSPKNFYFSVLSSSWMVITAALFFMGVSWYVLEVYLRDRGEERFNNNVQELIEAVNSRMIVYEQVLRGGI
GLFLASDGVTREEWQTYVVNARLIEYYPGIQGFGYTPLLTPETLEAHVNQVRTEGFSEYNVYPQGERDLYCVIQYLEPFD
WRNQRAFGFDMCSETNRRSAILSSIATGMPTISGKVILVQETQDNTQSGFLMYLPLYQGQATTDEERKQRAVGVIYAAFR
MDDLMQGIMGNRFSGLTLAIYDGENANAESLMFTSNKLLPSPQDLFYQSQTAIIEGRVWRLDISSESAFISSSEQTQSFW
LQLIGCGFILALFYSVVVMARNRYQESRLTSELIANEKRFRLVIEASPSALFMIDRTGVITLVNTHAERLFGYAREELLG
HSINMLLPKGLWDIHQQHMSNYLVQPIAKNMSMRDDLFGCCKDGSRLAIEVGLTPIHFSNGLSILATINNVSERKRVEIQ
RAQHTKELERINQELDRFAYIASHDLKSPLRGIEQLTSWLAEDLVDNTNENVQKYLGLIQNRIHRMVLLLDGLLMFSRIG
RVDAEIVEVDARQLIEDMFELVAPPQGFELLLEGEFPNFKTVKTLLELVVRNLMSNAIKHHDRDTGVIKVQCEPKGDVYW
FSVVDDGPGISKAYHGKVFEMFQTLKPRDEVEGSGLGLSLVKKTIESLGGEIKLESEGRGCRFRFSWPVRIVNKEVL

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=359, Percent_Identity=27.0194986072423, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI48994928, Length=378, Percent_Identity=23.8095238095238, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789808, Length=231, Percent_Identity=25.974025974026, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1790436, Length=228, Percent_Identity=27.1929824561404, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786600, Length=400, Percent_Identity=24.5, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 81883; Mature: 81883

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKDDFPKYFDSPKNFYFSVLSSSWMVITAALFFMGVSWYVLEVYLRDRGEERFNNNVQE
CCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
LIEAVNSRMIVYEQVLRGGIGLFLASDGVTREEWQTYVVNARLIEYYPGIQGFGYTPLLT
HHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHEEEEEEEECCCCCCCCCCCCCCC
PETLEAHVNQVRTEGFSEYNVYPQGERDLYCVIQYLEPFDWRNQRAFGFDMCSETNRRSA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEHHCCCCCCCCCCCCCHHHCCCCHHHH
ILSSIATGMPTISGKVILVQETQDNTQSGFLMYLPLYQGQATTDEERKQRAVGVIYAAFR
HHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
MDDLMQGIMGNRFSGLTLAIYDGENANAESLMFTSNKLLPSPQDLFYQSQTAIIEGRVWR
HHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEECEEEE
LDISSESAFISSSEQTQSFWLQLIGCGFILALFYSVVVMARNRYQESRLTSELIANEKRF
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RLVIEASPSALFMIDRTGVITLVNTHAERLFGYAREELLGHSINMLLPKGLWDIHQQHMS
EEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH
NYLVQPIAKNMSMRDDLFGCCKDGSRLAIEVGLTPIHFSNGLSILATINNVSERKRVEIQ
HHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCEEEEECCCCEEEEEHHHHHHHHHHHHH
RAQHTKELERINQELDRFAYIASHDLKSPLRGIEQLTSWLAEDLVDNTNENVQKYLGLIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NRIHRMVLLLDGLLMFSRIGRVDAEIVEVDARQLIEDMFELVAPPQGFELLLEGEFPNFK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH
TVKTLLELVVRNLMSNAIKHHDRDTGVIKVQCEPKGDVYWFSVVDDGPGISKAYHGKVFE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHH
MFQTLKPRDEVEGSGLGLSLVKKTIESLGGEIKLESEGRGCRFRFSWPVRIVNKEVL
HHHHCCCCHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCEEECCCCCC
>Mature Secondary Structure
MHKDDFPKYFDSPKNFYFSVLSSSWMVITAALFFMGVSWYVLEVYLRDRGEERFNNNVQE
CCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
LIEAVNSRMIVYEQVLRGGIGLFLASDGVTREEWQTYVVNARLIEYYPGIQGFGYTPLLT
HHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHEEEEEEEECCCCCCCCCCCCCCC
PETLEAHVNQVRTEGFSEYNVYPQGERDLYCVIQYLEPFDWRNQRAFGFDMCSETNRRSA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEHHCCCCCCCCCCCCCHHHCCCCHHHH
ILSSIATGMPTISGKVILVQETQDNTQSGFLMYLPLYQGQATTDEERKQRAVGVIYAAFR
HHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
MDDLMQGIMGNRFSGLTLAIYDGENANAESLMFTSNKLLPSPQDLFYQSQTAIIEGRVWR
HHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEECEEEE
LDISSESAFISSSEQTQSFWLQLIGCGFILALFYSVVVMARNRYQESRLTSELIANEKRF
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
RLVIEASPSALFMIDRTGVITLVNTHAERLFGYAREELLGHSINMLLPKGLWDIHQQHMS
EEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH
NYLVQPIAKNMSMRDDLFGCCKDGSRLAIEVGLTPIHFSNGLSILATINNVSERKRVEIQ
HHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCEEEEECCCCEEEEEHHHHHHHHHHHHH
RAQHTKELERINQELDRFAYIASHDLKSPLRGIEQLTSWLAEDLVDNTNENVQKYLGLIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NRIHRMVLLLDGLLMFSRIGRVDAEIVEVDARQLIEDMFELVAPPQGFELLLEGEFPNFK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH
TVKTLLELVVRNLMSNAIKHHDRDTGVIKVQCEPKGDVYWFSVVDDGPGISKAYHGKVFE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHH
MFQTLKPRDEVEGSGLGLSLVKKTIESLGGEIKLESEGRGCRFRFSWPVRIVNKEVL
HHHHCCCCHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]